mRNA_H-paniculata_contig50431.12301.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: UPI001FD537A7 (fatty acid desaturase n=2 Tax=Janibacter anophelis TaxID=319054 RepID=UPI001FD537A7) HSP 1 Score: 56.6 bits (135), Expect = 8.640e-8 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G+SFY+++ R V G SA+RL+A R+ R +PV + N +
Sbjct: 211 VATPEDPASSRLGESFYAFWPRTVVGSLRSAWRLEATRLRRRGKPVLHPGNDV 263
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: W0UBH9_9BACT (Alkane hydroxylase (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=W0UBH9_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 9.490e-8 Identity = 22/51 (43.14%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTN 153
+ATP+DP STR G++F+ + R+V G F SA+ L+A R+ +PV +++N
Sbjct: 13 VATPEDPASTRLGETFWGFLPRSVIGSFKSAWHLEAQRLQRCGKPVWHWSN 63
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: A0A231P8V4_9ACTN (Alkane 1-monooxygenase n=3 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A231P8V4_9ACTN) HSP 1 Score: 56.2 bits (134), Expect = 1.160e-7 Identity = 24/53 (45.28%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G+SF+ + RAV G SA+RL++ R+ RDR V ++ N +
Sbjct: 166 VATPEDPASSRMGESFWRFLPRAVVGSLRSAWRLESRRLRRRDRRVWSHHNDV 218
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: W0UA43_9BACT (Alkane hydroxylase (Fragment) n=1 Tax=uncultured bacterium TaxID=77133 RepID=W0UA43_9BACT) HSP 1 Score: 54.3 bits (129), Expect = 1.350e-7 Identity = 21/51 (41.18%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTN 153
+ATP+DP ++R G+SFY +F R + G F SA++++A R+ + V +Y+N
Sbjct: 13 VATPEDPATSRFGESFYEFFPRCIIGSFKSAWQIEAKRLKREGKSVWHYSN 63
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: A0A0Q9KAV5_9MICO (Alkane 1-monooxygenase n=2 Tax=Janibacter sp. Soil728 TaxID=1736393 RepID=A0A0Q9KAV5_9MICO) HSP 1 Score: 55.8 bits (133), Expect = 1.620e-7 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G+SFY+++ R V G +A+RL+A R+ R +PV + +N +
Sbjct: 200 VATPEDPASSRLGESFYAFWPRTVFGSLRNAWRLEATRLRRRGKPVLHPSNDV 252
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: L7LCJ3_9ACTN (Alkane-1-monooxygenase n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 TaxID=1121927 RepID=L7LCJ3_9ACTN) HSP 1 Score: 55.5 bits (132), Expect = 2.210e-7 Identity = 24/53 (45.28%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G+SF+++F R+V G SA+ L+ANR+ RPV + +N +
Sbjct: 210 VATPEDPASSRFGESFWTFFPRSVFGSLRSAWELEANRMKRLGRPVFHPSNDV 262
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: A0A4P6MXT5_9MICO (Alkane 1-monooxygenase n=1 Tax=Janibacter limosus TaxID=53458 RepID=A0A4P6MXT5_9MICO) HSP 1 Score: 55.1 bits (131), Expect = 3.020e-7 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G+SFY+++ R V G SA+RL+++R+ R +PV + N +
Sbjct: 202 VATPEDPASSRLGESFYAFWPRTVFGSLRSAWRLESSRLRRRGKPVLHPGNDV 254
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: M3TBY3_9ACTN (Alkane-1-monooxygenase n=5 Tax=Gordonia TaxID=2053 RepID=M3TBY3_9ACTN) HSP 1 Score: 55.1 bits (131), Expect = 3.020e-7 Identity = 23/53 (43.40%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
+ATP+DP S+R G++F+S+ R+V G SA+ L+ANR+ D+PV + +N +
Sbjct: 208 VATPEDPASSRFGETFWSFLPRSVYGSLKSAWELEANRLKKIDKPVFHRSNDV 260
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: W0UA04_9BACT (Alkane hydroxylase (Fragment) n=11 Tax=uncultured bacterium TaxID=77133 RepID=W0UA04_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 7.920e-7 Identity = 21/51 (41.18%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTN 153
+ATP+DP S+R G++F+ + R+V G F SA+ L+A R+ +PV +++N
Sbjct: 13 VATPEDPASSRLGETFWGFLPRSVIGSFKSAWHLEAQRLQRCGKPVWHWSN 63
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Match: A0A8B0LS91_9BACT (Rubredoxin-dependent alkane monooxygenase (Fragment) n=5 Tax=uncultured bacterium TaxID=77133 RepID=A0A8B0LS91_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 8.900e-7 Identity = 22/53 (41.51%), Postives = 35/53 (66.04%), Query Frame = 1
Query: 1 IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTNSI 159
++TP+DP S+R G+SFY + R V G F SA++L+ R++ R PV + N +
Sbjct: 41 VSTPEDPASSRLGESFYRFLPRTVIGSFRSAWKLEVTRLTNRKLPVWSRHNDV 93 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50431.12301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig50431.12301.1 >prot_H-paniculata_contig50431.12301.1 ID=prot_H-paniculata_contig50431.12301.1|Name=mRNA_H-paniculata_contig50431.12301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=63bp IATPQDPVSTRKGQSFYSYFMRAVTGMFTSAFRLDANRISCRDRPVCNYTback to top mRNA from alignment at H-paniculata_contig50431:942..1130- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig50431.12301.1 ID=mRNA_H-paniculata_contig50431.12301.1|Name=mRNA_H-paniculata_contig50431.12301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=189bp|location=Sequence derived from alignment at H-paniculata_contig50431:942..1130- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig50431:942..1130- >mRNA_H-paniculata_contig50431.12301.1 ID=mRNA_H-paniculata_contig50431.12301.1|Name=mRNA_H-paniculata_contig50431.12301.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=378bp|location=Sequence derived from alignment at H-paniculata_contig50431:942..1130- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |