mRNA_H-paniculata_contig504.12294.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A0A6H5L721_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L721_9PHAE) HSP 1 Score: 456 bits (1174), Expect = 3.390e-154 Identity = 251/377 (66.58%), Postives = 289/377 (76.66%), Query Frame = 3
Query: 102 SKLVPWYPAISAVAAAVGFALLAKAFAPPLHYLSTYNRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKRFGTAARAMKGSVKFGVVDCTGSLPSGKSILQKFDLSQELQPVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGPLEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPFQGAHQLLYVTRYDVGDKPKVGTPRWGLQVFEGTLNTDAMSTFIDDAAKSEEEQGPASKHTRSNAKNSTITPLTRLPTVMTRKEPKVKPPXXXRPDSAAAGVTEGQEGEAGAED-GGTGQYSGMNKEQLLEEFRAKQAEREAARRKAMDAEADNFLFEAVDE 1229
S+L PWYPA+ A+ AV A LAKA APP+H+LSTYNR QM+DVFLGKG W VLCSG + +AV KRFGTA++AM GS KFGVVDC GSLPSGKSILQKFDLS+E++PVLFVTG G+ P QAS+RNMETH +L KWVQ A PGASPVTSTRELESKCLKKERCAL++KAGPLED VK+AFK+LM HRNL+FVS+D+TKLETS+EKKLG+KP G+HQL++ TRY+V K KVGTPRWG+QV+ G L T +MS FI+ AA + G K T LTRLPTVMTRKEPK KP XXX G+E A AE GG G+Y GM+KE+LLE FR KQAERE ARRK MD EADNFLFEAVDE
Sbjct: 18 SRLAPWYPAVVAMGVAVALAFLAKALAPPIHFLSTYNRNQMKDVFLGKGMWVVLCSG-EGAGYDAVYKRFGTASKAMTGSAKFGVVDCAGSLPSGKSILQKFDLSEEVKPVLFVTGAGLTPAQASSRNMETHASLLKWVQVMATPGASPVTSTRELESKCLKKERCALVMKAGPLEDDVKDAFKDLMGNHRNLKFVSIDSTKLETSLEKKLGIKPVDGSHQLVHFTRYNVTGKVKVGTPRWGVQVYSGALETASMSVFIEGAAIA----GTKEK-----------TALTRLPTVMTRKEPKAKPXXXXXXXEG------GEERGASAEGLGGAGKYEGMDKEKLLEAFRKKQAEREVARRKEMDEEADNFLFEAVDE 372
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: D8LFH7_ECTSI (NIMA-like PK similar to Serine/threonine-protein kinase Nek1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFH7_ECTSI) HSP 1 Score: 238 bits (606), Expect = 4.480e-67 Identity = 137/266 (51.50%), Postives = 167/266 (62.78%), Query Frame = 3
Query: 252 WAVLCSGGDNGDSEAVTKRFGTAARAMKGSVKFGVVDCTGSLPSGKSILQKFDLSQELQ-PVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGPLEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPFQGAHQLLYVTRYDVGDKPKVGTPRWGLQVFEGTLNTDAMSTFIDDAAKSEEEQGPASKHTRSNAKNSTITPLTRLPTVMTRKEPKVKPPXXXRPDSAAA 1046
W VLC D + RF TA+R + SVKFGVVDC GSLPSGKSI+QKF L+ L P+LFV G +KPVQAS NM++ +L KW P ASPVTSTR LE+KC+KKE+C LI+ AG LE A KE+M RHR +RFVS+DATKLETSIEK+ +KP GAH ++ TRY+V K GTPRWG+QV+ G L+TD+MS F+ +EE+QG L PTV TRK K K RP+ AAA
Sbjct: 363 WVVLCKK-KGPDYNSAYGRFETASRTLTESVKFGVVDCFGSLPSGKSIIQKFGLTNRLNTPILFVAGAEMKPVQASPWNMDSEASLVKWASIAITPAASPVTSTRSLETKCMKKEQCVLIMLAGQLESADDYALKEVMARHRKVRFVSMDATKLETSIEKRFDIKPVDGAHHFVHFTRYNVPVNAKAGTPRWGVQVYRGKLDTDSMSAFL---GGNEEKQG-----------------LRHAPTVSTRKATKKK-----RPEEAAA 602
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A0A835ZG14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG14_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.920e-39 Identity = 133/391 (34.02%), Postives = 182/391 (46.55%), Query Frame = 3
Query: 108 LVPWYPAISAVAAAVGFALLAKAFAPPLHYLSTYNRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKRFGTAARAMKG-SVKFGVVDCTGSLPSGKSILQKFDLSQELQPVLFVTGRGIKPV-QASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGP----LEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPF--QGAHQLLYVTRYDVG-------DKPKVGTPRWGLQVFEGTLNTDAMSTFIDDAAKSEEEQGPASKHTRSNAKNSTITPLTRLPTVMTRKEPKVKPPXXXRPDSAA--AGVTEGQEGEAGAEDGGTGQYSGMNKEQLLEEFRAKQAEREAARRKAMDAEADNFLFEAVDE 1229
L PW A++ ++AA A + + + PLHYLS N QM+ VFLG TW VLC G + AV F ARA V FGV+DC G+LPSGK++L+KF + + P +F G + QA AR + + KWV+ T EP + V ++++L +CL K+ C L+LKA + KE + M RHR LRF + DA K E S+E KLG G H LY +P G RW L V++ L + ++ A + PA+ +TPLTR T R XXX A E G Y+G K ++L EF K+ RE +R+ MDAE F+AV E
Sbjct: 8 LEPWLKAMAVISAAFAAAYILRGVSQPLHYLSARNVDQMRAVFLGNETWVVLCHAG----AAAVPALFDATARAPPSPGVAFGVLDCGGTLPSGKTVLEKFGIDVGVAPTVFAALPGARTTRQAPARALASRAHFAKWVRDTVEPHSFAVATSKDLLERCLVKDECCLVLKAAGGGEGMGGAEKEGVRAAMYRHRGLRFAAADAAKHELSLEAKLGFGDALEAGNHVALYFRNVTAAAAEGTKDGRPPKGATRWLLGVYKDDLG--GLGDWLAGMA-----EAPAAA----------LTPLTRAATARKRSXXXXXXXXXXXXXXXXXXAKXXXXXXXEGGEAVDPANPYAGKTKAEILAEFAKKRLAREKEKREQMDAE-----FDAVSE 372
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A0A7S2A9Q6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9Q6_TRICV) HSP 1 Score: 103 bits (256), Expect = 8.380e-20 Identity = 81/278 (29.14%), Postives = 143/278 (51.44%), Query Frame = 3
Query: 69 KGQKRPXXXXXSKLVPWYPAISAVAAAVGFALLAKAFAPPLHYLSTYNRAQMQDVFLGKG---TWAVLCSGGDNGDSEA---VTKRFGTAARAMKGSVKFGVVDCTGSLP-SGKSILQKFDLSQELQPVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGPLEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPFQGAHQLLYVTRY----DVGDKPKVGTPRWGLQVF-EGTLNTDAM 866
KG+K KL+ PAI AA +G+ + + + + + +++VF G+G +AVLC+ +S+ ++ F AA + F ++DC LP SGK++ ++F ++ + +P +FV+G+ P Q ++++T L K ++ EP A + +T++L+ KCL ++RC L+LK G E VKEA L+ +H ++ F SVD+T L S ++ + +G H+ + + DVG K + T G + EG L T +
Sbjct: 4 KGKKTQKPPAVDKLL--MPAIGVAAAVLGYYFF-QGVSLEIPRIDPTDELALREVFFGEGRGKNYAVLCNTLPADESKKPLPISSVFSDAAEDGSANADFVLLDCEHVLPDSGKTVAERFGINLKKRPTVFVSGKVGPPKQVPEKHLKTGNMLVKLLRQMLEPHAQKIENTKDLKVKCLNRDRCGLLLKGGKPEPYVKEAISNLLKKHPDVTFASVDSTVLLLSNLEEYLPEFVKGQHRFVVFEKVSGGLDVGGKDENETEDGGAKKEKEGRLVTSIL 278
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: L1JA46_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JA46_GUITC) HSP 1 Score: 86.7 bits (213), Expect = 2.380e-14 Identity = 61/246 (24.80%), Postives = 120/246 (48.78%), Query Frame = 3
Query: 198 LSTYNRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKRFGTAARAM-KGSVKFGVVDCTGSLPSGKSILQKFDLSQELQ-PVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGPLEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPFQGAHQLLYVTRYDVGDKPKVGTPRWGLQVFEG-TLNTDAMSTFIDDAAKSEEEQGPASKH 926
+ T + A + +VFL + V C+G E + K F A+ + + S+ +DC G+LPSGK+++++F ++L P+ F+ P + R+ T + ++ T S +++ +L +CL++++CAL+L G + + L + R + FV VD+ KL+ S+E L + G +L+Y+ G + K + + ++G + +++ FIDD + + KH
Sbjct: 112 IETDDAAMVHEVFLSGNPYFVQCAG----PLEPLHKTFVDASAGLVESSITPAAMDCNGTLPSGKTVVERFFKGKKLHDPLFFIVANKRLPRSFTIRSHVTSDFVVQFAVNTTAVVVSNISNQEDLREECLRRKQCALVLHDGNYSGQERAVVLSLAPKFRGIAFVQVDSRKLQFSLEDALPVS--NGKPRLVYMEMNPDGKEKKTREKSFSGKSYKGGEWSEESLGGFIDDVISKKTKLAKLKKH 351
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A9UZL1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UZL1_MONBE) HSP 1 Score: 74.3 bits (181), Expect = 1.160e-10 Identity = 47/155 (30.32%), Postives = 73/155 (47.10%), Query Frame = 3
Query: 186 PLHYLSTYNRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKRFGTAARAMKGSVKFGVVDCTGSLPSGKSILQKFDLSQ-ELQPVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALILKAGPLEDRVKEA 647
P+ + T + A + VFL W V C G G + A R K V ++C+ +LPSGK++ ++F L + +P L G K VQ NM++ L + ++ A+ VTST L+ CL + +C L L GP + V+ A
Sbjct: 27 PIVLVDTSDTALLDQVFLSGDPWLVACGEGQYGTPPELLSL--AAPRLAKLGVSAATINCSATLPSGKTVTKRFKLQEWSGKPRLLFAANGRKVVQVMPSNMKSVERLVTFAHSKSKVAATAVTSTSSLQKACLSRRQCLLQLHQGPADRTVRAA 179
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A0A1Z9KRE2_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. TMED187 TaxID=1986595 RepID=A0A1Z9KRE2_9SYNE) HSP 1 Score: 71.6 bits (174), Expect = 1.220e-9 Identity = 44/182 (24.18%), Postives = 85/182 (46.70%), Query Frame = 3
Query: 186 PLHYLSTYNRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKR------FGTAARAMKGSVKFGVVDCTGSLPSGKSILQKFDLSQELQPVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCAL--ILKAGPLEDRVKEAFKELMVRHRNLRFVSVDATK 707
P+ + ++ ++ V W + C G + + + + F + ++G V+ G +DC LPS KS+++KF L+++ QP+L G KP Q + + + ++ WV+ A+P VT+ ++L C + C L + K P+ ++L +HR L V+ T+
Sbjct: 38 PISAIQVHDTDLLKRVLFSGEPWLLQCYSGLPYEGQHLPRPYRVHPVFKESLGPLRGLVRTGTLDCEAKLPSNKSLIEKFGLTRQTQPLLLFASGGRKPKQLAGTQVASAYSVTAWVKPRAQPTVRHVTTQKQLHEWCAGRRACVLTRMAKESPV-------LEQLAAKHRTLEVVTFGETE 212
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Match: A0A7S0TSR5_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSR5_HEMAN) HSP 1 Score: 65.5 bits (158), Expect = 8.770e-8 Identity = 53/231 (22.94%), Postives = 101/231 (43.72%), Query Frame = 3
Query: 210 NRAQMQDVFLGKGTWAVLCSGGDNGDSEAVTKRFGTAAR--AMKGSVKFGVVDCTGSLPSGKSILQKF---DLSQELQPVLFVTGRGIKPVQASARNMETHGALQKWVQGTAEPGASPVTSTRELESKCLKKERCALI---LKAGPLEDRVKEAFKELMVRHRNLRFVSVDATKLETSIEKKLGLKPFQGAHQLLYVTRYDVGDKPKVGTPRWGLQVFEGTLNTDAMSTFI 878
N Q++ VF G W + C + + F AA+ ++ G VK+GV+DC+G LPS K+ Q+F ++ PV ++ G P + + L W + ++P ++ + CL ++ C ++ K P++ K++M HR + FVS++ +TS + K+ ++ + R G K + G + L + G ++ F+
Sbjct: 87 NPDQLKKVFFGGEPWLLHCMNVNT----TMALSFEKAAKKSSVDGLVKYGVIDCSGKLPSNKTFFQRFKTPSVNFTKTPVAYLFANGGGPDKVPDKIFADAKKLAAWAEKHSKPKVQELSWSSSFSKFCLHRDACVMLHAKAKYQPVD-----WMKDVMASHRGVPFVSINRKLHKTSFDDKVKAPRKDDVPRVAVMQR---GPKKEDGKSDYTLTPYRGEWAKKDVAEFL 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig504.12294.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig504.12294.1 >prot_H-paniculata_contig504.12294.1 ID=prot_H-paniculata_contig504.12294.1|Name=mRNA_H-paniculata_contig504.12294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=437bp MAPSKLAKGQKRPPPPPPSKLVPWYPAISAVAAAVGFALLAKAFAPPLHYback to top mRNA from alignment at H-paniculata_contig504:10607..19243+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig504.12294.1 ID=mRNA_H-paniculata_contig504.12294.1|Name=mRNA_H-paniculata_contig504.12294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8637bp|location=Sequence derived from alignment at H-paniculata_contig504:10607..19243+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig504:10607..19243+ >mRNA_H-paniculata_contig504.12294.1 ID=mRNA_H-paniculata_contig504.12294.1|Name=mRNA_H-paniculata_contig504.12294.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2622bp|location=Sequence derived from alignment at H-paniculata_contig504:10607..19243+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |