mRNA_H-paniculata_contig5038.12289.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig5038.12289.1
Unique NamemRNA_H-paniculata_contig5038.12289.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A2H9ZU53_9ASPA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2H9ZU53_9ASPA)

HSP 1 Score: 166 bits (419), Expect = 1.970e-45
Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S  G R+ I+F+DDY+RM  VY L+ KSE L A K F+  + R +G  IK LR+D+   +    F+ FC ENGI +E +A YT +Q+GVAER+ R+I EMA + +    +   +WAE+V +AVY LN + T+     T YE W G   ++ HL++FGC AYV   S  R KL+DK+   +F+GY   S +YR+YN  +K +
Sbjct:  199 SLSGSRYFILFIDDYTRMNWVYFLKNKSEALEAFKIFKAFVERQSGYFIKVLRTDRGGEFLSHEFKAFCEENGIHRELTAPYTPEQNGVAERKNRTIVEMARSLLKAKGIPNQFWAESVATAVYLLNISPTKAILNRTLYEVWKGRKSRISHLKIFGCIAYVYVNSHDRHKLEDKSEKCIFIGYCPQSKAYRLYNPCSKKL 399          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A6A3ACL1_HIBSY (Putative cyclic nucleotide-gated ion channel 8 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3ACL1_HIBSY)

HSP 1 Score: 168 bits (425), Expect = 1.400e-44
Identity = 87/201 (43.28%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S GG R+ + F+DD+SR   +Y L+ KSE L  L++F+    + +G  +K LRSD+   YT K F +FC E+GI  + +A YT QQ+GVAER+ R+I +MA + +    + R +WAEAVR AVY LN   T+     TP E W G+   + HL++FGC AY     Q R+KLDD+    +F+GY+E S +YR+YN   K +
Sbjct:  300 SLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKI 500          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A4Y1QWW3_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QWW3_PRUDU)

HSP 1 Score: 166 bits (421), Expect = 3.920e-44
Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            SF   R+ I+FVDD+SRM  VY L  KSE     KQF+      +G  +K LR+D+   +T   F ++C  NGIK+E +A YT QQ+GVAERR R+I EMA + +   ++  T+WAEA+ +AV+ LN + T+     TP+E WH    K+   ++FGCTAY    SQ+R K D+K    +F+GY++ S +YR+ +   KS+
Sbjct:  198 SFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSL 398          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A4Y1R9H3_PRUDU (Transposable element protein (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R9H3_PRUDU)

HSP 1 Score: 166 bits (421), Expect = 4.670e-44
Identity = 85/201 (42.29%), Postives = 124/201 (61.69%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            SF   R+ I+FVDD+SRM  VY L  KSE     KQF+      +G  +K LR+D+   +T   F ++C  NGIK+E +A YT QQ+GVAERR R+I EMA + +   ++  T+WAEA+ +AV+ LN + T+     TP+E WH    K+   ++FGCTAY    SQ+R K D+K    +F+GY++ S +YR+ +   KS+
Sbjct:  435 SFNNKRYFILFVDDFSRMMWVYFLEQKSEAFSVFKQFKAFGENQSGHNLKVLRTDRGGEFTSNEFSEYCKSNGIKRELTARYTPQQNGVAERRNRTIVEMARSMLKAKSLPNTFWAEAIHTAVFILNRSPTKAVKDKTPFEAWHRFKPKVDFFKIFGCTAYAHIPSQKREKFDEKGEKYIFVGYSDQSKAYRLIDPRTKSL 635          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 166 bits (421), Expect = 4.880e-44
Identity = 86/201 (42.79%), Postives = 124/201 (61.69%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S GG R+ + F+DD+SR   +Y L+ KSE L  L++F+    + +G  +K LRSD+   YT K F +FC E+GI  + +  YT QQ+GVAER+ R+I +MA + +    + R +WAEAVR AVY LN   T+     TP E W G+   + HL++FGC AY     Q R+KLDD+    +F+GY+E S +YR+YN   K +
Sbjct: 1326 SLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKI 1526          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 166 bits (420), Expect = 6.360e-44
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S GG R+ + F+DD+SR   +Y L+ KSE L  LK+F+    + +G  +K LRSD+   YT K F +FC E+GI  + +A YT QQ+GVAER+ R+I +MA + +    + R +WAEAVR AVY LN   T+     TP E W G+   + H ++FGC AY       R+KLDD+    +F+GY+E S +YR+YN   K +
Sbjct:  405 SLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKI 605          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A068B703_GOSBA (Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A068B703_GOSBA)

HSP 1 Score: 166 bits (419), Expect = 8.780e-44
Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S GG R+ + F+DDYSR   VY L+ KSE L   K+F+  + + +G  +K LRSD+   YT K +  FC ++GI  + +A  T QQ+GVAER+ R+I +MA + +   ++ RT+WAEAV  AVY LN   T+     TP E W G   ++ HL++FGC AY     QQR+KLDD+    +F+GY++ S +YR+YN   K +
Sbjct:  559 SLGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYTAKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVECAVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIFIGYDKRSKAYRLYNPLTKKL 759          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: UPI001CC6DD69 (uncharacterized protein LOC110630572 n=1 Tax=Manihot esculenta TaxID=3983 RepID=UPI001CC6DD69)

HSP 1 Score: 164 bits (415), Expect = 3.060e-43
Identity = 79/195 (40.51%), Postives = 127/195 (65.13%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYN 585
            S  G R+ ++FVDDYSRM  V+ L+ KSEVL   K+F   + + +G  +K LR+D+   +    F + C + GI+++ +A+YT QQ+GVAER+ RS+ EMA + +   N+ +++WAEA+ +A Y LN + T   +  TP+E W+G   K+ H ++FGC AYV+  SQ+R KLD+ +   +F+GY+ ++  YR Y+
Sbjct:  626 SLNGSRYFVVFVDDYSRMTWVFFLKNKSEVLPTFKKFRSLIEKQSGNAVKILRTDRGGEFVSAEFDKLCEDFGIQRQLTASYTPQQNGVAERKIRSLVEMAKSMLKAKNLPKSFWAEAIHTAAYILNRSSTSALSNQTPFEAWNGWKPKVKHFKIFGCVAYVLVPSQKRGKLDENSVRCIFVGYSMETKGYRFYD 820          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A151TGQ2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151TGQ2_CAJCA)

HSP 1 Score: 162 bits (411), Expect = 9.940e-43
Identity = 81/201 (40.30%), Postives = 128/201 (63.68%), Query Frame = 1
Query:    1 SFGGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENKSV 603
            S G   + ++F+DD+SR   VY L+ KSEV    K+F+  + + +GL IK LRSD+   +T K F+++C +NGI+++ +   + QQ+GVAER+ R+I EMA + + +  + + +WAEAV  AVY  N + TR  +G TP E W G    + HLRVFG  A+V    ++R KLDDK+   +F+GY+ +S  Y++YN +++  
Sbjct:  474 SLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFTSKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVACAVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIFIGYDANSKGYKLYNPDSRKT 674          
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Match: A0A2Z7BCE9_9LAMI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BCE9_9LAMI)

HSP 1 Score: 161 bits (408), Expect = 1.020e-42
Identity = 78/193 (40.41%), Postives = 123/193 (63.73%), Query Frame = 1
Query:    7 GGCRFAIIFVDDYSRMRKVYTLR*KSEVLWALKQFERDLARANGLRIKRLRSDQEEGYTGKPFRQFCAENGIKQEFSAAYTQQQSGVAERRWRSIFEMATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQKLYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYN 585
            GG ++ ++FVDDYSRM  VY L+ KSE      +F+  + +  G  +K LR+D+   +T   F Q+C ++GI +E +A YT +Q+GVAER+ R+I EMA + + +  +   +WAEAV +AVY +N + T+     TPYE W G+   + HL++FGC  YV+  + +R KL++K+   +F+GY   S +YR+YN
Sbjct:  366 GGSKYFLLFVDDYSRMSWVYFLKFKSEAFGQFFKFKALVEKQKGSNLKILRTDRGGEFTSMEFNQYCEKHGIHKELTAPYTPEQNGVAERKNRTIVEMARSMLKSKGLPYNFWAEAVTTAVYLINLSPTKAVMNKTPYEAWSGKRPSVEHLKIFGCIVYVLINANERHKLEEKSIKCIFIGYCSQSKAYRVYN 558          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5038.12289.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H9ZU53_9ASPA1.970e-4543.28Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3ACL1_HIBSY1.400e-4443.28Putative cyclic nucleotide-gated ion channel 8 n=1... [more]
A0A4Y1QWW3_PRUDU3.920e-4442.29Transposable element protein n=1 Tax=Prunus dulcis... [more]
A0A4Y1R9H3_PRUDU4.670e-4442.29Transposable element protein (Fragment) n=1 Tax=Pr... [more]
A0A6A2WXP0_HIBSY4.880e-4442.79Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A6A2WSU7_HIBSY6.360e-4442.79Integrase catalytic domain-containing protein n=2 ... [more]
A0A068B703_GOSBA8.780e-4442.79Polyprotein n=5 Tax=Gossypium TaxID=3633 RepID=A0A... [more]
UPI001CC6DD693.060e-4340.51uncharacterized protein LOC110630572 n=1 Tax=Manih... [more]
A0A151TGQ2_CAJCA9.940e-4340.30Retrovirus-related Pol polyprotein from transposon... [more]
A0A2Z7BCE9_9LAMI1.020e-4240.41Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5038contigH-paniculata_contig5038:12410..13015 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score95.1
Seed ortholog evalue2e-17
Seed eggNOG ortholog15368.BRADI2G01640.1
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Mitochondrial protein
EggNOG OGs37THH@33090,3GG2K@35493,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons1
Model size606
Cds size309
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930479.6173177-CDS-H-paniculata_contig5038:12409..127181622930479.6173177-CDS-H-paniculata_contig5038:12409..12718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5038 12410..12718 -
1691481310.5116873-CDS-H-paniculata_contig5038:12409..127181691481310.5116873-CDS-H-paniculata_contig5038:12409..12718Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig5038 12410..12718 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930479.6367786-UTR-H-paniculata_contig5038:12718..130151622930479.6367786-UTR-H-paniculata_contig5038:12718..13015Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5038 12719..13015 -
1691481310.52823-UTR-H-paniculata_contig5038:12718..130151691481310.52823-UTR-H-paniculata_contig5038:12718..13015Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig5038 12719..13015 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5038.12289.1prot_H-paniculata_contig5038.12289.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig5038 12410..12718 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig5038.12289.1

>prot_H-paniculata_contig5038.12289.1 ID=prot_H-paniculata_contig5038.12289.1|Name=mRNA_H-paniculata_contig5038.12289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=103bp
MATAGMITTNMGRTYWAEAVRSAVYCLNHALTRPHNGGTPYEKWHGETQK
LYHLRVFGCTAYVMFQSQQRRKLDDKAWAGVFLGYNEDSLSYRIYNRENK
SV*
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mRNA from alignment at H-paniculata_contig5038:12410..13015-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig5038.12289.1 ID=mRNA_H-paniculata_contig5038.12289.1|Name=mRNA_H-paniculata_contig5038.12289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=606bp|location=Sequence derived from alignment at H-paniculata_contig5038:12410..13015- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCCTTCGGAGGATGTCGCTTCGCCATTATCTTCGTCGACGACTACAGCAG AATGCGCAAAGTCTATACCTTGCGATAAAAGTCGGAGGTGCTATGGGCTC TGAAGCAATTCGAGAGGGACCTAGCAAGGGCAAACGGTTTGCGGATTAAG CGCCTTCGGTCGGATCAGGAAGAAGGATATACTGGGAAGCCCTTTAGGCA ATTCTGCGCGGAAAATGGCATCAAGCAGGAGTTCTCTGCCGCCTACACAC AACAACAAAGCGGTGTGGCGGAGCGCCGCTGGCGCAGCATTTTCGAGATG GCAACAGCCGGCATGATCACCACTAACATGGGTCGTACATATTGGGCCGA AGCGGTGCGCTCGGCAGTGTACTGCTTAAATCATGCCCTGACGCGACCGC ACAATGGAGGAACGCCCTACGAAAAATGGCACGGCGAGACACAAAAGTTG TACCACCTTCGAGTCTTCGGCTGCACGGCGTATGTTATGTTTCAATCGCA GCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGTGTTTCTGGGGT ACAACGAGGACAGCCTGAGTTATCGCATATATAACCGGGAAAACAAGAGC GTCTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig5038:12410..13015-

>mRNA_H-paniculata_contig5038.12289.1 ID=mRNA_H-paniculata_contig5038.12289.1|Name=mRNA_H-paniculata_contig5038.12289.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=618bp|location=Sequence derived from alignment at H-paniculata_contig5038:12410..13015- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCAACAGCCGGCATGATCACCACTAACATGGGTCGTACATATTGGGC
CGAAGCGGTGCGCTCGGCAGTGTACTGCTTAAATCATGCCCTGACGCGAC
CGCACAATGGAGGAACGCCCTACGAAAAATGGCACGGCGAGACACAAAAG
TTGTACCACCTTCGAGTCTTCGGCTGCACGGCGTATGTTATGTTTCAATC
GCAGCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGGGGTGTTTCTGG
GGTACAACGAGGACAGCCTGAGTTATCGCATATATAACCGGGAAAACAAG
AGCGTCTAGATGGCAACAGCCGGCATGATCACCACTAACATGGGTCGTAC
ATATTGGGCCGAAGCGGTGCGCTCGGCAGTGTACTGCTTAAATCATGCCC
TGACGCGACCGCACAATGGAGGAACGCCCTACGAAAAATGGCACGGCGAG
ACACAAAAGTTGTACCACCTTCGAGTCTTCGGCTGCACGGCGTATGTTAT
GTTTCAATCGCAGCAGAGACGCAAGCTCGACGACAAAGCATGGGCGGGGG
TGTTTCTGGGGTACAACGAGGACAGCCTGAGTTATCGCATATATAACCGG
GAAAACAAGAGCGTCTAG
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