prot_H-paniculata_contig50232.12274.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50232.12274.1
Unique Nameprot_H-paniculata_contig50232.12274.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length127
Homology
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A1M2VH23_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VH23_TRAPU)

HSP 1 Score: 84.3 bits (207), Expect = 1.670e-18
Identity = 44/113 (38.94%), Postives = 66/113 (58.41%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            EP+   EAQASP+W HW+ A   E+  L ++  +  VE P N  +V +  +++ K   EG + +YK  LVA G  Q+ GI + E  +P   +AS + +L+LAA  DWEL  +D
Sbjct:   12 EPRTLAEAQASPDWPHWENAIAKEIDNLRKHDTYDLVEPPHNTNIVGSRFVFRIKRDAEGSITQYKARLVAQGFTQMPGIDFNETFAPVAKLASIRTILALAARYDWELEQMD 124          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A443PJ17_9MAGN (Copia protein gag-int-pol protein n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443PJ17_9MAGN)

HSP 1 Score: 85.9 bits (211), Expect = 5.500e-17
Identity = 41/113 (36.28%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            EPK+ +EA     W H   A + E++ L +NG WT    P  K  + +  +YK K   +G +E++K CLV +GN QI GI Y E  +P   + + +  L++AA ++WEL  +D
Sbjct:  811 EPKSFKEAMTDVGWRH---AMQTEIRALEDNGTWTMETLPPGKRALGSQWVYKIKYNSDGSIERFKACLVVFGNHQIAGIDYNETFAPVAKMVTVRAFLAIAASKNWELHQMD 920          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL)

HSP 1 Score: 84.3 bits (207), Expect = 1.920e-16
Identity = 42/109 (38.53%), Postives = 62/109 (56.88%), Query Frame = 0
Query:   17 QEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVDF 125
            +EA+  P+W HWQ A   E+  L   G WT V  P  + VV    + + K    G++EKYK  LVA G  Q++G+ Y E  +P   +AS ++VL++AA  DW++   DF
Sbjct: 1066 EEARRRPDWPHWQAAINTELDSLKSAGTWTVVPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDF 1174          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A540NMU0_MALBA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NMU0_MALBA)

HSP 1 Score: 79.7 bits (195), Expect = 3.470e-16
Identity = 39/98 (39.80%), Postives = 58/98 (59.18%), Query Frame = 0
Query:   27 HWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            HW+ A + E + L + G W  V  P+N+ V+ +  +YK K  ++GKV +YK  LVA G  Q  G+ Y E  SP     + ++VLSLAA+  W+LR +D
Sbjct:   64 HWRNAMQEEFEALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLEYDETFSPVVRHTTVRLVLSLAAMNKWDLRQLD 161          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A8I6XHP4_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XHP4_HORVV)

HSP 1 Score: 81.6 bits (200), Expect = 1.630e-15
Identity = 44/113 (38.94%), Postives = 64/113 (56.64%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            EP N  EA  SP W H   A + EM+ +  NG WT V  P N+  V    +YK K   +G + KYK  LVA G  Q +G+ Y E  +P   + + +++L+LAA +DW++ H+D
Sbjct:  669 EPANFVEASKSPSWTH---AMDEEMKAIESNGTWTLVTRPPNQKTVGLKWVYKLKKDTKGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQEDWKVHHMD 778          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A8H7NVE6_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NVE6_9APHY)

HSP 1 Score: 79.7 bits (195), Expect = 7.540e-15
Identity = 41/111 (36.94%), Postives = 66/111 (59.46%), Query Frame = 0
Query:   16 HQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVDFE 126
            ++EA A PE E W+ A E E+ ++   G +  VE PK   VV  + + ++K  E  +V K+K  L A G  Q+ G+ Y + ++P   +AS ++VL+LAA  DWE+  +DF+
Sbjct:  223 YREAMAGPESEDWRVAMEEELAKIEAMGTYELVEKPKGANVVGCVWVLRKKRDENNEVAKFKARLCAQGFSQVHGVDYDQTAAPTARLASLRLVLALAAANDWEVHQIDFK 333          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A8H7TXH5_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7TXH5_9APHY)

HSP 1 Score: 79.3 bits (194), Expect = 1.070e-14
Identity = 40/111 (36.04%), Postives = 68/111 (61.26%), Query Frame = 0
Query:   16 HQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVDFE 126
            ++EA A PE + W+ A + E+ ++   G +  VE PK+  +V ++ + K+K  E   V K+K  L A G  Q+ GI Y E ++P  +++S ++VL+LAA  DWE+  +DF+
Sbjct:  719 YREAMAGPECDDWKIAMQEELAKIEAMGTYELVEPPKDVNIVGSVWVLKKKRDEHNNVAKFKARLCAQGFSQVYGIDYVETAAPTASLSSLRLVLALAAANDWEIHQIDFK 829          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A177U1E5_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U1E5_9BASI)

HSP 1 Score: 79.0 bits (193), Expect = 1.460e-14
Identity = 38/114 (33.33%), Postives = 64/114 (56.14%), Query Frame = 0
Query:   11 VEPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            +EP  + EA+   +WE W +A + +M  L+    W  V+ P  +  + +  +YK K+ EEGK +++K  LVA G  Q+ G+ Y E  +P   + S +++L+LAA   W +  VD
Sbjct:  730 LEPATYAEARRRSDWEKWNKAMDEQMDALVGMHTWDLVQLPPGRKAIGSRWVYKLKLDEEGKADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVD 843          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A151S309_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S309_CAJCA)

HSP 1 Score: 78.2 bits (191), Expect = 2.630e-14
Identity = 38/99 (38.38%), Postives = 58/99 (58.59%), Query Frame = 0
Query:   26 EHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELRHVD 124
            E W+RA E E+  L  NG WT V  P   + +    +YK K   +G +E+YK  LVA G  QI+G+ Y +  SP   + + ++VL+LAA+Q+W +  +D
Sbjct:  273 ECWKRAMEAEISALENNGTWTLVHLPPGIISIGNKWVYKIKTRSDGTIERYKARLVAKGYTQIEGLDYLDTFSPVAKLTTIRVVLALAAMQNWHIHQLD 371          
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Match: A0A5N5FUF0_9ROSA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5FUF0_9ROSA)

HSP 1 Score: 78.2 bits (191), Expect = 2.660e-14
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 0
Query:   12 EPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVECPKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPAPAVASTKMVLSLAAIQDWELR 121
            EP ++++A +S    HW+ A + E + L + G W  V  P+N+ V+ +  +YK K  ++GKV +YK  LVA G  Q  G+ Y+E  SP     + ++VLSLAA+  W+LR
Sbjct:  615 EPTHYKQAVSSV---HWRNAMQEEFEALQKQGTWELVPVPQNRNVIGSKWVYKLKKDQDGKVSRYKARLVAQGFSQEHGLDYEETFSPVVRHTTVRLVLSLAAMNKWDLR 721          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50232.12274.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1M2VH23_TRAPU1.670e-1838.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A443PJ17_9MAGN5.500e-1736.28Copia protein gag-int-pol protein n=1 Tax=Cinnamom... [more]
A0A146H565_MYCCL1.920e-1638.53Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]
A0A540NMU0_MALBA3.470e-1639.80Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8I6XHP4_HORVV1.630e-1538.94Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
A0A8H7NVE6_9APHY7.540e-1536.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A8H7TXH5_9APHY1.070e-1436.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A177U1E5_9BASI1.460e-1433.33Integrase catalytic domain-containing protein n=2 ... [more]
A0A151S309_CAJCA2.630e-1438.38Retrovirus-related Pol polyprotein from transposon... [more]
A0A5N5FUF0_9ROSA2.660e-1438.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..125
e-value: 3.0E-13
score: 50.0
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..124
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 12..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50232contigH-paniculata_contig50232:862..1242 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50232.12274.1mRNA_H-paniculata_contig50232.12274.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50232 862..1242 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50232.12274.1 ID=prot_H-paniculata_contig50232.12274.1|Name=mRNA_H-paniculata_contig50232.12274.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=127bp
MPEELRSDLPVEPKNHQEAQASPEWEHWQRAEEVEMQRLIENGAWTQVEC
PKNKLVVSTMMMYKRKIGEEGKVEKYKCCLVAYGNRQIKGIHYQEASSPA
PAVASTKMVLSLAAIQDWELRHVDFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like