prot_H-paniculata_contig5019.12266.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig5019.12266.1
Unique Name	prot_H-paniculata_contig5019.12266.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	89

Homology

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: D7G3Q7_ECTSI (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q7_ECTSI)

HSP 1 Score: 133 bits (334), Expect = 9.790e-36
Identity = 67/89 (75.28%), Postives = 79/89 (88.76%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            L+LVLD++YR   +DL+K E RLVFADPG ERQ SVYNALQKV+  +SLVCIHDAARPLVTK+ V+KVI+DA+E+GAAVLGVPMKATVK
Sbjct:  105 LILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKVIADADEYGAAVLGVPMKATVK 193

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A835YTP8_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTP8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 1.750e-34
Identity = 61/89 (68.54%), Postives = 76/89 (85.39%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            ++LV+D++YRD F+ +++ E RLVFADPG ERQ+SV+N LQ V   AS+VCIHDAARPLVTK C+ +V+ DAEEHGAAVLGVPMKATVK
Sbjct:   97 IILVIDQQYRDQFKTMQEEEPRLVFADPGIERQNSVFNGLQAVHEGASVVCIHDAARPLVTKECIYQVLRDAEEHGAAVLGVPMKATVK 185

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S2V2L3_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2L3_9STRA)

HSP 1 Score: 119 bits (297), Expect = 7.500e-31
Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            ++LVLD++YR  ++ +   E RL FADPGKERQDSV N L  V   ASLVC+HDAARPLVT   + +VI+DAEEHGAAVLGVPMKATVK
Sbjct:  113 IILVLDEQYRPNYQSVSDEEPRLKFADPGKERQDSVCNGLSLVGEGASLVCVHDAARPLVTPENIHQVIADAEEHGAAVLGVPMKATVK 201

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S2DHR1_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHR1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.070e-29
Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            +VLV+D +Y   FE L+    +L+FA PGKERQDSV+N LQK++ +A +VCIHDAARPL+T   + KV+ D  EHGAAVLGVPMKATVK
Sbjct:  115 VVLVIDAKYESQFEPLQALNPKLIFAPPGKERQDSVFNGLQKINDDAPVVCIHDAARPLITPEAIYKVLRDGIEHGAAVLGVPMKATVK 203

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: W7TNV7_9STRA (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNV7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.170e-28
Identity = 55/89 (61.80%), Postives = 69/89 (77.53%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            +V+VLDK YR  F  L++ + R+VFADPGKERQDSV+N   +  P+AS+VCIHD+ARPLV++S V   + D   HGAAVLGVPMKATVK
Sbjct:  130 IVIVLDKSYRQEFSFLQEEDPRIVFADPGKERQDSVFNGFSQTLPDASVVCIHDSARPLVSQSAVLASLRDGSVHGAAVLGVPMKATVK 218

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S3EJ10_9RHOD (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJ10_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 2.050e-28
Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDP-EASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            +VLV+D+ Y + + DL   +++L FA PGKERQDSVYN LQK    +A L+C+HDAARPLVT   +RKV++DAE HGAAVLGVP KATVK
Sbjct:  106 VVLVVDESYHEDYADLSGGDRQLHFASPGKERQDSVYNGLQKATVNDAGLICVHDAARPLVTPEEIRKVLNDAETHGAAVLGVPCKATVK 195

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S0Y4H2_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y4H2_HEMAN)

HSP 1 Score: 110 bits (274), Expect = 5.480e-28
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            + +V+ +EYRD F+D+ K + R+ FA PGKERQDSV+N LQ+V   A+LV +HDAARPLVT   V  V  DA+EHGAAVL VPMKATVK
Sbjct:  129 ITIVIAEEYRDMFDDIVKKDDRIRFAGPGKERQDSVFNGLQQVPDSATLVAVHDAARPLVTPEEVYNVFRDAKEHGAAVLAVPMKATVK 217

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S0VEW7_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VEW7_9CRYP)

HSP 1 Score: 110 bits (274), Expect = 1.130e-27
Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            + +V+ +EYRD F+D+ K++ R+ FA PGKERQDSV+N LQ+V   A LV +HDAARPLVT   V  V  DA+EHGAAVL VPMKATVK
Sbjct:  106 ITIVIAEEYRDMFDDIVKADDRIRFAGPGKERQDSVFNGLQQVPESAKLVAVHDAARPLVTPEEVYNVFRDAKEHGAAVLAVPMKATVK 194

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A7S4UD44_GUITH (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UD44_GUITH)

HSP 1 Score: 110 bits (274), Expect = 2.930e-27
Identity = 53/89 (59.55%), Postives = 68/89 (76.40%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            +V+V+  EYRD   D+ K + R+ FA+PGKERQDSV+N LQ+   + SL+CIHDAARPLVT+  +   ++DA EHGAAVL VPMKATVK
Sbjct:  138 IVIVIAPEYRDSLADVTKKDARICFAEPGKERQDSVFNGLQETALDTSLICIHDAARPLVTEQEILSCMNDALEHGAAVLAVPMKATVK 226

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BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Match: A0A1S3UW16_VIGRR (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=8 Tax=Vigna TaxID=3913 RepID=A0A1S3UW16_VIGRR)

HSP 1 Score: 109 bits (273), Expect = 3.770e-27
Identity = 58/90 (64.44%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 LVLVLDKEYRDGFEDLRKS-EKRLVFADPGKERQDSVYNALQKVDPEASLVCIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK 89
            +V+V D  YRD FED + + E  L FA PGKERQDSVYN LQ VDP + LVCIHD+ARPLV  S VRKV++D   +GAAVLGVP+KAT+K
Sbjct:  127 VVVVCDPSYRDVFEDAKGNYEAELKFALPGKERQDSVYNGLQAVDPSSELVCIHDSARPLVLSSDVRKVLTDGLLNGAAVLGVPVKATIK 216

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig5019.12266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G3Q7_ECTSI	9.790e-36	75.28	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A835YTP8_9STRA	1.750e-34	68.54	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A7S2V2L3_9STRA	7.500e-31	66.29	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A7S2DHR1_9STRA	2.070e-29	61.80	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
W7TNV7_9STRA	1.170e-28	61.80	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A7S3EJ10_9RHOD	2.050e-28	62.22	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A7S0Y4H2_HEMAN	5.480e-28	61.80	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S0VEW7_9CRYP	1.130e-27	61.80	Hypothetical protein (Fragment) n=1 Tax=Hemiselmis...	[more]
A0A7S4UD44_GUITH	2.930e-27	59.55	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]
A0A1S3UW16_VIGRR	3.770e-27	64.44	2-C-methyl-D-erythritol 4-phosphate cytidylyltrans...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR034683	Cytidylyltransferase IspD/TarI	PFAM	PF01128	IspD	coord: 2..89 e-value: 1.0E-16 score: 61.4
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10		coord: 1..89 e-value: 1.7E-22 score: 82.0
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 2..89
None	No IPR available	PANTHER	PTHR32125	FAMILY NOT NAMED	coord: 1..89
None	No IPR available	PANTHER	PTHR32125:SF4	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC	coord: 1..89
IPR018294	4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site	PROSITE	PS01295	ISPD	coord: 50..57

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig5019	contig	H-paniculata_contig5019:12181..14031 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig5019.12266.1	mRNA_H-paniculata_contig5019.12266.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig5019 12181..14031 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig5019.12266.1 ID=prot_H-paniculata_contig5019.12266.1|Name=mRNA_H-paniculata_contig5019.12266.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
LVLVLDKEYRDGFEDLRKSEKRLVFADPGKERQDSVYNALQKVDPEASLV
CIHDAARPLVTKSCVRKVISDAEEHGAAVLGVPMKATVK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR034683	IspD/TarI
IPR029044	Nucleotide-diphossugar_trans
IPR018294	ISPD_synthase_CS