prot_H-paniculata_contig5017.12263.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5017.12263.1
Unique Nameprot_H-paniculata_contig5017.12263.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: D7FRV6_ECTSI (Complex1_LYR_dom domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRV6_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 1.940e-35
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 0
Query:    1 MAQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVMENVT 86
            MAQPSRTAVLGLYKGLRR+GA LMDYNYR+YALRRAR GFE AR    EEA  AF KGQ++LE+VRRQA IS+LYPHQ+SVME +T
Sbjct:    1 MAQPSRTAVLGLYKGLRRQGALLMDYNYREYALRRARRGFELARGFAPEEAEAAFKKGQRELEIVRRQAAISQLYPHQTSVMETMT 86          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A0G4IIG7_PLABS (Complex1_LYR_dom domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IIG7_PLABS)

HSP 1 Score: 74.3 bits (181), Expect = 1.620e-15
Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 0
Query:    4 PSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVMENV 85
            P+R+A L LYK +RR G +  D+N+R+Y +RRAR  FE  R  T  +A   + KG + L+VVRRQ+T++R+Y H  +V E +
Sbjct:    6 PTRSACLALYKNVRRAGLQFKDFNFREYVVRRARERFEAGRAATGADAARLYEKGIEDLQVVRRQSTLNRMYAHGRNVAETM 87          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: W7TGY8_9STRA (Complex 1 LYR protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGY8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 7.430e-14
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 0
Query:    2 AQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSS 80
            A PSR  VLGL++ L R+  RL DYN+R YA RR   GF++ R  + EEA   +  G + LE+++RQA IS LYP + S
Sbjct:   17 ATPSRQHVLGLFRSLLRQAGRLEDYNFRSYAKRRVALGFQEGRSSSGEEAAREYRDGVKNLEMLKRQALISHLYPSKRS 95          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A1E7FPY9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FPY9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 2.480e-12
Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 0
Query:    1 MAQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVMENVTT 87
            M+QP     + L++ L ++  ++ DYN+R YA+RR R GF+Q RL     A  A  +GQ+QL V+ RQ+ ISRLYP   SVM+ + T
Sbjct:    1 MSQPQ----IVLFRNLMKQATQMNDYNFRAYAIRRIRGGFDQNRLLEGNTAQMAIKEGQEQLAVLTRQSVISRLYPSAKSVMDTLPT 83          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: UPI00035A1C09 (LYR motif-containing protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00035A1C09)

HSP 1 Score: 66.2 bits (160), Expect = 2.740e-12
Identity = 37/85 (43.53%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 MAQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFA-KGQQQLEVVRRQATISRLYPHQSSVMEN 84
            MA  +RT VL LYK L +E  R+ DYN+R+YALRR R  F++ +  T    ++A   K Q+ LE++RRQAT+S+L+  +  ++E+
Sbjct:    1 MAASTRTKVLSLYKELLKESKRVTDYNFRNYALRRTRDAFKENKAITDAGQIQALVVKAQENLEMLRRQATVSQLFGSEKLIIES 85          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A448Z9M6_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9M6_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.260e-12
Identity = 38/82 (46.34%), Postives = 51/82 (62.20%), Query Frame = 0
Query:    7 TAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVMENVTTI 88
            T  + L++ L RE  +  DYN+R YA+RR R GFE+ R    + A  A  +GQ+Q  V+ RQ+TISRLYP   SVME  T +
Sbjct:    2 TQQIALFRRLLREAKQFNDYNFRAYAVRRIRGGFEKNRHLEGDAAQIALKEGQEQFSVLARQSTISRLYPSAQSVMEAPTAV 83          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A7S1G6K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6K1_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 7.980e-12
Identity = 39/80 (48.75%), Postives = 51/80 (63.75%), Query Frame = 0
Query:    5 SRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQ-SSVME 83
            +R+  + LY+   RE     DYN+R+YALRRAR GFE+ R  + + A  A A+G   LEV+RRQA IS LY    +SVME
Sbjct:    6 ARSQAISLYRSFVREAKGFKDYNFREYALRRARAGFEENRAASGDAAAAALAEGNAALEVLRRQALISSLYTKGGASVME 85          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A7S2P523_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P523_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 8.580e-12
Identity = 36/76 (47.37%), Postives = 50/76 (65.79%), Query Frame = 0
Query:    8 AVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVME 83
            AV  LY+ L RE  RL DYN+R YA+RR + GFE  R     E   A   G++QL++++RQ+TI ++YP  +SVME
Sbjct:   32 AVKSLYRSLAREAKRLSDYNFRTYAIRRVKKGFELNRNLAGLEINAAIEDGKRQLDMLKRQSTIGQMYPGATSVME 107          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A8J5XP77_DIALT (Complex1_LYR_dom domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XP77_DIALT)

HSP 1 Score: 64.3 bits (155), Expect = 1.380e-11
Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    6 RTAVLGLYKGLRREGARLMDYNYRDYALRRARTGF-EQARLHTAEEAVEAFAKGQQQLEVVRRQATISRLYPHQSSVME 83
            RT VL L+K L R       YN+R+YALRR R GF E+A +    +  E   +G +QLEVVR+QA IS+LYP    VME
Sbjct:    4 RTQVLALFKKLMRASRSFTHYNFREYALRRVRLGFREKAGVSDPAQIAELVGEGSKQLEVVRKQALISQLYPQARHVME 82          
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Match: A0A2C9KVK4_BIOGL (Complex1_LYR_dom domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KVK4_BIOGL)

HSP 1 Score: 63.9 bits (154), Expect = 2.450e-11
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 0
Query:    1 MAQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEEAVEAFA-KGQQQLEVVRRQATISRLYPHQSSVMEN 84
            MA P+RT VL LYK + REG ++ DYN+R YALRR R  F++ +  T  E ++    K  + LE+++RQAT+S+LY     V+E+
Sbjct:    7 MAAPTRTTVLTLYKQILREGKKVTDYNFRMYALRRTRDAFKENKNVTDLEQMQLLTQKAIKNLEMLKRQATVSQLYGSSKLVIES 91          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5017.12263.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRV6_ECTSI1.940e-3576.74Complex1_LYR_dom domain-containing protein n=2 Tax... [more]
A0A0G4IIG7_PLABS1.620e-1545.12Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
W7TGY8_9STRA7.430e-1448.10Complex 1 LYR protein n=1 Tax=Nannochloropsis gadi... [more]
A0A1E7FPY9_9STRA2.480e-1243.68Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
UPI00035A1C092.740e-1243.53LYR motif-containing protein 4 n=1 Tax=Aplysia cal... [more]
A0A448Z9M6_9STRA3.260e-1246.34Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A7S1G6K1_9STRA7.980e-1248.75Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A7S2P523_9STRA8.580e-1247.37Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A8J5XP77_DIALT1.380e-1149.37Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A2C9KVK4_BIOGL2.450e-1144.71Complex1_LYR_dom domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 8..63
e-value: 4.2E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR13166PROTEIN C6ORF149coord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5017contigH-paniculata_contig5017:733..8149 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5017.12263.1mRNA_H-paniculata_contig5017.12263.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5017 491..8909 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5017.12263.1 ID=prot_H-paniculata_contig5017.12263.1|Name=mRNA_H-paniculata_contig5017.12263.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
MAQPSRTAVLGLYKGLRREGARLMDYNYRDYALRRARTGFEQARLHTAEE
AVEAFAKGQQQLEVVRRQATISRLYPHQSSVMENVTTIEDAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR