prot_H-paniculata_contig5015.12261.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5015.12261.1
Unique Nameprot_H-paniculata_contig5015.12261.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length294
Homology
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BLAST of mRNA_H-paniculata_contig5015.12261.1 vs. uniprot
Match: D8LGV6_ECTSI (Glycosyl transferase family 2 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV6_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 8.390e-16
Identity = 105/355 (29.58%), Postives = 145/355 (40.85%), Query Frame = 0 
Query:    2 GKGRVLWEEVIVCRGQDNDGGNGGATGSSG---AWSKARDRGVVKVVGCGNSHNKGEDEPXXXXXXXXXXXXXKHGEVWLVCAASDAATAEWLWVPGPAIASAL-----------------------TAMEDAVAGGGGGEGREETRPSVIGELFRLATRSDVSGTVFG--------------------VMGWVRTRPKVGSEWGSSGKEKWHFIAGGGAVPEGMEETVA-IEVDALASGIFVKGSHLRAACDLMR---------GNDIGVTPNVYDTNKHGSNTQTNG-------------------SPP--------AVPSGVEIDDA----MKLSSVSYVLRRTLGVRSYVA 269
            G+    WEEV VC  ++++G   G  GS G   AW +A +RG VK+V C +    G DE              + GE+ L CAA DA+ +E++WVPGPA+A AL                        A    V G  G  G + T+ +   +  R        G V G                      G  R+  K     G   K  W F+ G GA   G E     +EVDAL   +FV+G+HLR AC L+R         G  +GV+ +  D  +  ++   +G                   SP         A  +G E  ++    MKL +VSYVLR+TLGVRSY +
Sbjct:  229 GEAEWAWEEVFVC--EEDEGALDGILGSRGEGEAWREALERGAVKLVPCSSG---GADE-------------RRAGELSLACAAGDASVSEFVWVPGPAVAEALGMADAKRSTPSGRGAEVVARLSRAAAATGVEGVFGVRGWQRTQDAPRPKRQRRGLLVQSGGVVGGEPRRDAPEPAQPDGEPEGETAGGGRRSLLKAFKRTGRDEKP-WQFVGGAGA---GAETGAGLVEVDALTDALFVRGTHLRHACALLRNAGTSGRAAGRRLGVS-SAGDGGEEETSDFVDGQRQXXXXXXXXXXXXXXGISPDRRRRRATMAKTTGNEAANSAISFMKLPAVSYVLRKTLGVRSYAS 560
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5015.12261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGV6_ECTSI8.390e-1629.58Glycosyl transferase family 2 protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5015contigH-paniculata_contig5015:2453..11426 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5015.12261.1mRNA_H-paniculata_contig5015.12261.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5015 2453..11426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5015.12261.1 ID=prot_H-paniculata_contig5015.12261.1|Name=mRNA_H-paniculata_contig5015.12261.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=294bp
GGKGRVLWEEVIVCRGQDNDGGNGGATGSSGAWSKARDRGVVKVVGCGNS
HNKGEDEPPPPPPPATTTTTTKHGEVWLVCAASDAATAEWLWVPGPAIAS
ALTAMEDAVAGGGGGEGREETRPSVIGELFRLATRSDVSGTVFGVMGWVR
TRPKVGSEWGSSGKEKWHFIAGGGAVPEGMEETVAIEVDALASGIFVKGS
HLRAACDLMRGNDIGVTPNVYDTNKHGSNTQTNGSPPAVPSGVEIDDAMK
LSSVSYVLRRTLGVRSYVARTGAAGNLGTALMAGGGGGGGSDGG
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