prot_H-paniculata_contig50149.12260.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50149.12260.1
Unique Nameprot_H-paniculata_contig50149.12260.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length112
Homology
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A2K3M5H6_TRIPR (Retrotransposon protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3M5H6_TRIPR)

HSP 1 Score: 107 bits (268), Expect = 3.700e-25
Identity = 55/112 (49.11%), Postives = 79/112 (70.54%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M EE R++V+N TW+  D   LP G++ I  KW++K K  ED SV +YKARL+A+G+SQ  G DF ET APVARM T+RTV +LAA+   ++  +D+  A+L+  +EEE++V
Sbjct:    1 MNEEMRSIVKNRTWQLVD---LPTGKEAIGLKWVYKTKYNEDGSVQKYKARLVAKGYSQQPGVDFNETFAPVARMETIRTVLALAAQLELQVFQLDVKSAFLNGELEEEVYV 109          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A4Y1R7U6_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1R7U6_PRUDU)

HSP 1 Score: 101 bits (252), Expect = 1.940e-24
Identity = 45/112 (40.18%), Postives = 82/112 (73.21%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            + +E++++++N TW   +   LPAG K I  KW+F++KLK D S+ +YKARL+A+GF+Q +G D+F+T +PV+R+ T+RT+ +LA+ H   +  +D+  A+L+  ++EE+++
Sbjct:   12 INDEFQSIIQNNTWMLTN---LPAGNKAIGCKWVFRKKLKPDGSIDKYKARLVAKGFTQKKGIDYFDTYSPVSRITTIRTLIALASVHNLVIHQMDVKTAFLNGDLDEEIYM 120          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 105 bits (263), Expect = 2.890e-24
Identity = 49/112 (43.75%), Postives = 80/112 (71.43%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            ++ E  +++ NGTWE  D    P G K +  KW+FK+KL+ D ++ +YKARL+A+G++Q EGED+F+T +PVAR+ T+R + SLAA H F +  +D+  A+L+  +EEE+++
Sbjct:  205 VQSEMDSIMSNGTWEVVD---RPFGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYM 313          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A6P9F263_JUGRE (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Juglans regia TaxID=51240 RepID=A0A6P9F263_JUGRE)

HSP 1 Score: 97.8 bits (242), Expect = 2.960e-24
Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEE 108
            M  E +AL +N TW  E    LP G+K I  KW+FK KLK D S+ RYKARL+A+G++QVEG D+ ET APVA+M T+R + ++AA   + +  +D++ A+L   ++E
Sbjct:    1 MSAELQALQDNSTWTLEH---LPPGKKPIGCKWVFKTKLKADGSIERYKARLVAKGYTQVEGLDYHETFAPVAKMTTVRCLLAIAATKNWIIHQLDVNNAFLHGDLDE 105          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A151S2M5_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S2M5_CAJCA)

HSP 1 Score: 100 bits (248), Expect = 3.060e-24
Identity = 51/112 (45.54%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M+ E  AL +N TWE      LP G+K +  KW++  K K D S+ RYKARL+A+GF+Q  G D+ ET APVA+M T+R + SLAA + + LE  D+  A+L   +EEE+++
Sbjct:    1 MDVEMEALEKNNTWELVT---LPIGKKPVGCKWVYTVKYKADGSIERYKARLVAKGFTQTYGVDYLETFAPVAKMNTIRVILSLAANYGWNLEQFDVKNAFLHGDLEEEIYM 109          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A2I0JVU9_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0JVU9_PUNGR)

HSP 1 Score: 99.0 bits (245), Expect = 4.340e-24
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M EE RAL  NGTW  E   RLP G++ I  KW+ K K + D S+ RYKARL+A+GF+QVEG D+ ET APVA++ T+R + ++A    + L  +D++ A+L   +EEE+++
Sbjct:   47 MAEEIRALELNGTWTIE---RLPYGKRPIGCKWVHKVKRRADGSIERYKARLVAKGFTQVEGVDYHETFAPVAKLVTIRCLLTVAVAKGWHLHQMDVNNAFLHGDLEEEVYM 155          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A2K3JLR7_TRIPR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3JLR7_TRIPR)

HSP 1 Score: 97.8 bits (242), Expect = 7.200e-24
Identity = 49/112 (43.75%), Postives = 75/112 (66.96%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M  E +AL +N TW+   P   P G+K++  +W++K K K    V +YKARL+A+GF+Q+EGEDF ET APVA+M T+R + S+A    +EL  +D+  A+L   +EEE+++
Sbjct:    1 MAAEIKALEDNKTWDVMLP---PVGKKIVGCRWVYKVKYKASGEVEKYKARLVAKGFTQIEGEDFNETFAPVAKMTTVRCLLSVAVAKGWELHQMDVSNAFLHGDLEEEVYM 109          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI)

HSP 1 Score: 104 bits (260), Expect = 7.640e-24
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M+E+  ALV   TW+  +   LPAGRK I ++W++K KL ED    R+KARL+AQGF+QV G D+FET APVAR+ +LR + +LAA   + +  +D+  AYL+  +EEE+++
Sbjct:  652 MDEQMNALVGMHTWDLVE---LPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYI 760          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI)

HSP 1 Score: 104 bits (260), Expect = 7.640e-24
Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M+E+  ALV   TW+  +   LPAGRK I ++W++K KL ED    R+KARL+AQGF+QV G D+FET APVAR+ +LR + +LAA   + +  +D+  AYL+  +EEE+++
Sbjct:  653 MDEQMNALVGMHTWDLVE---LPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYI 761          
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR)

HSP 1 Score: 104 bits (260), Expect = 7.700e-24
Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 0
Query:    1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 112
            M+ E   L  NGTW+    G LP GRK I +KW+F  K  +D S+ +YKARL+AQGFSQ+ G+D+F+T +PV R  T R   +LAA    + + +DI  AYL  P+EEE+++
Sbjct:  851 MDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYM 959          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K3M5H6_TRIPR3.700e-2549.11Retrotransposon protein n=1 Tax=Trifolium pratense... [more]
A0A4Y1R7U6_PRUDU1.940e-2440.18Transposable element protein n=1 Tax=Prunus dulcis... [more]
C6JRI2_SORBI2.890e-2443.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6P9F263_JUGRE2.960e-2446.30uncharacterized mitochondrial protein AtMg00820-li... [more]
A0A151S2M5_CAJCA3.060e-2445.54Retrovirus-related Pol polyprotein from transposon... [more]
A0A2I0JVU9_PUNGR4.340e-2446.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3JLR7_TRIPR7.200e-2443.75Retrovirus-related Pol polyprotein from transposon... [more]
A0A177TL22_9BASI7.640e-2447.32Integrase catalytic domain-containing protein n=1 ... [more]
A0A177U0N4_9BASI7.640e-2447.32Integrase catalytic domain-containing protein n=2 ... [more]
Q45W64_PHACR7.700e-2446.43Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 22..112
e-value: 4.2E-23
score: 82.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 1..112
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 1..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50149contigH-paniculata_contig50149:302..637 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50149.12260.1mRNA_H-paniculata_contig50149.12260.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50149 302..637 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50149.12260.1 ID=prot_H-paniculata_contig50149.12260.1|Name=mRNA_H-paniculata_contig50149.12260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp
MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKA
RLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEA
YLSAPVEEELFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like