mRNA_H-paniculata_contig50149.12260.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A177TL22_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TL22_9BASI) HSP 1 Score: 104 bits (260), Expect = 7.640e-24 Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M+E+ ALV TW+ + LPAGRK I ++W++K KL ED R+KARL+AQGF+QV G D+FET APVAR+ +LR + +LAA + + +D+ AYL+ +EEE+++
Sbjct: 652 MDEQMNALVGMHTWDLVE---LPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYI 760
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A177U0N4_9BASI (Integrase catalytic domain-containing protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177U0N4_9BASI) HSP 1 Score: 104 bits (260), Expect = 7.640e-24 Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M+E+ ALV TW+ + LPAGRK I ++W++K KL ED R+KARL+AQGF+QV G D+FET APVAR+ +LR + +LAA + + +D+ AYL+ +EEE+++
Sbjct: 653 MDEQMNALVGMHTWDLVE---LPAGRKAIGSRWVYKLKLNEDGMADRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFGWVIHQVDVVTAYLNGDLEEEVYI 761
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: Q45W64_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W64_PHACR) HSP 1 Score: 104 bits (260), Expect = 7.700e-24 Identity = 52/112 (46.43%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M+ E L NGTW+ G LP GRK I +KW+F K +D S+ +YKARL+AQGFSQ+ G+D+F+T +PV R T R +LAA + + +DI AYL P+EEE+++
Sbjct: 851 MDAEMAQLEANGTWKK---GELPPGRKAIGSKWVFAIKRHQDGSIDKYKARLVAQGFSQIAGQDYFDTFSPVVRQETFRVATALAATENLDSDALDIVGAYLHGPLEEEIYM 959
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A834DAP9_JUGRE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Juglans regia TaxID=51240 RepID=A0A834DAP9_JUGRE) HSP 1 Score: 102 bits (253), Expect = 1.040e-23 Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M E RAL N TW E LP G+K IR KWIFK K K D S+ RYKARL+A G++QVEG D+ ET APVA+M T+R + ++AA + + +D++ A+L ++EE+++
Sbjct: 1 MTVELRALEANSTWTLES---LPPGKKPIRCKWIFKTKFKADGSIERYKARLVANGYTQVEGLDYHETFAPVAKMTTVRCLLAVAATKNWIIHQLDVNNAFLHGDLDEEVYM 109
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A182GR55_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR55_AEDAL) HSP 1 Score: 97.1 bits (240), Expect = 1.530e-23 Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M++E++A +EN TWE + LPAGRK I +KWIFK K E ++ R+KARL+AQGF+Q G DF E APVA+ TLRT+ ++A+ ++ +D+ AYL ++E +++
Sbjct: 1 MDDEYQAQIENNTWELVE---LPAGRKAIGSKWIFKSKEDEKGNIVRHKARLVAQGFNQKFGVDFDEVFAPVAKQVTLRTLLTVASRRGMLVKHMDVKTAYLHGKLDETIYM 109
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A2I0I2U7_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0I2U7_PUNGR) HSP 1 Score: 96.3 bits (238), Expect = 1.770e-23 Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
MEE+ RAL N TW E LP G++ I KW+FK K K D SV R+KARL+ +GF+QVEG D+ ET APVA++ T+R + ++A ++L +D++ A+L ++EE+++
Sbjct: 1 MEEKIRALENNNTWTVET---LPVGKQPIGCKWVFKVKRKADGSVERFKARLVTKGFTQVEGIDYNETFAPVAKLVTVRCLLTIALFRGWDLHQLDVNNAFLHGDLQEEVYM 109
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL) HSP 1 Score: 103 bits (256), Expect = 1.940e-23 Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M++E +L ENGTW+ D LP GRK + KWIFKRKL ED +V RYKARL+AQGF+Q G D+ E APV R T R + ++A++ ++ D+ AYL+ +EE +F+
Sbjct: 13 MDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFM 121
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: UPI00115FD4EF (hypothetical protein n=1 Tax=Acinetobacter baumannii TaxID=470 RepID=UPI00115FD4EF) HSP 1 Score: 97.8 bits (242), Expect = 2.630e-23 Identity = 48/112 (42.86%), Postives = 75/112 (66.96%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
++EE +A+ N TW+ D LP G+K + ++WIF K K D + RYKARL+A+GF+Q GED+ +T APVA++ T+R V SLA +EL +D+ A+L +E+E+++
Sbjct: 79 VQEETKAMELNHTWDEAD---LPKGKKAVTSRWIFTIKYKSDGGIERYKARLVARGFTQTYGEDYLDTFAPVAKLHTVRVVLSLAVNLEWELWQMDVKNAFLQGELEDEVYM 187
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: UPI001AA0F8A7 (hypothetical protein n=1 Tax=Bacteroides uniformis TaxID=820 RepID=UPI001AA0F8A7) HSP 1 Score: 94.7 bits (234), Expect = 4.840e-23 Identity = 50/102 (49.02%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYL 306
M EE+R+L+EN TW D LP GRK +R +W++K K D V + KARL+A+GFSQVEG D+ ET +PVA+M ++R V SL A E+ ID+ A+L
Sbjct: 4 MNEEYRSLLENNTW---DLVPLPKGRKFVRCRWVYKTKFGPDGKVDKNKARLIAKGFSQVEGIDYIETFSPVAKMNSIRLVVSLDASFKCEVHYIDVKSAFL 102
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Match: A0A177TFL0_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia indica TaxID=43049 RepID=A0A177TFL0_9BASI) HSP 1 Score: 102 bits (254), Expect = 4.950e-23 Identity = 53/112 (47.32%), Postives = 76/112 (67.86%), Query Frame = 1
Query: 1 MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKARLMAQGFSQVEGEDFFETSAPVARMPTLRTVFSLAAEHYFELEGIDIDEAYLSAPVEEELFV 336
M+E+ ALV TW D LP GRK I ++W++K KL ED R+KARL+AQGF+QV G D+FET APVAR+ +LR + +LAA + + +D+ AYL+ +EEE+++
Sbjct: 767 MDEQMEALVGMHTW---DVVELPPGRKAIGSRWVYKLKLDEDGVAHRWKARLVAQGFTQVAGVDYFETFAPVARLDSLRVILALAAHFDWVIHQVDVVTAYLNGDLEEEVYI 875 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50149.12260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig50149.12260.1 >prot_H-paniculata_contig50149.12260.1 ID=prot_H-paniculata_contig50149.12260.1|Name=mRNA_H-paniculata_contig50149.12260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp MEEEWRALVENGTWESEDPGRLPAGRKVIRTKWIFKRKLKEDSSVARYKAback to top mRNA from alignment at H-paniculata_contig50149:302..637+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig50149.12260.1 ID=mRNA_H-paniculata_contig50149.12260.1|Name=mRNA_H-paniculata_contig50149.12260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=336bp|location=Sequence derived from alignment at H-paniculata_contig50149:302..637+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig50149:302..637+ >mRNA_H-paniculata_contig50149.12260.1 ID=mRNA_H-paniculata_contig50149.12260.1|Name=mRNA_H-paniculata_contig50149.12260.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig50149:302..637+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |