prot_H-paniculata_contig1191.1225.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1191.1225.1
Unique Nameprot_H-paniculata_contig1191.1225.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length291
Homology
BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 9.070e-127
Identity = 205/291 (70.45%), Postives = 237/291 (81.44%), Query Frame = 0
Query:    1 MKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYSHYGYQHVD--MLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVAGKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASELNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGAAGGRNSXXXXXXXXXXXXXXLRISEERRWPTAGNGGGRY 289
            MKKYVAQPR+PEHARY KAKEM+EKK+ ++ ESLCG+WRQDFRD+I+RY HYGY HVD  +      C ACNRSN T V+AF+SG+EYDP RVWDGLRWDKHLP++WDDP A A +KQEA ATH+LGDTCKHKSHL+HSL HYKLYLVSKV+ K+R D+ L+PENFRGEG  +TS K+KKRCLNF+ENEFESLS+LL KA +LNGVKWG RAG+RGG GK FLE GA +SILDWLSGEA+ GQYG + LG   G    XXXXXXXXXXXXXX  +   RRW T G+  GRY
Sbjct:  686 MKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRY 976          
BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 1.370e-87
Identity = 142/200 (71.00%), Postives = 163/200 (81.50%), Query Frame = 0
Query:   90 RVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVAGKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASELNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGAAGGRNSXXXXXXXXXXXXXXLRISEERRWPTAGNGGGRY 289
            +VWDGLRWDKHLP++WDDP A A +KQEA ATH+LGDTCKHKSHL+HSL HYKLYLVSKV+ K+R D+ L+PENFRGEG   TS KKKKRCLNF+ENEFESLS+LL KA +LNGVKWG RAG+RGG GK FLE GA +SILDWLSGEA+ GQYG++ LG   G R +   XXXXXXXXXXX  +   RRW T G+ GGRY
Sbjct:   58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDLEGQR-AGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGGRY 256          
BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 1.370e-32
Identity = 64/93 (68.82%), Postives = 76/93 (81.72%), Query Frame = 0
Query:    1 MKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYSHYGYQHVD--MLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRV 91
            MKKYVAQPR+PEHARY KAKEM+EKK+ ++ ESLCG+WRQDFRD+I+RY HYGY HVD  +      C ACNRSN T V+AF+SG+EYDP RV
Sbjct:  714 MKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.160e-5
Identity = 43/138 (31.16%), Postives = 63/138 (45.65%), Query Frame = 0
Query:   16 YSKAKEMIEKKVCVTRESLC--GTWRQDFRDSILRYSHYGYQHVDMLDTVAHCGACNRSNVTKV--VAFMSGAEYDPIRVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKV 149
            Y KA +  E +VC  RES+   G+W Q+F  ++  Y   G+        V+H G     +  +   + + S    DP       + +               SKQ+      LG  C++KSHLYH+L+HYKLYLV KV
Sbjct:  971 YRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHF-----GVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSRGGYKSKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKV 1103          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE9.070e-12770.45DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI1.370e-8771.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8T9_ECTSI1.370e-3268.82DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLB0_ECTSI1.160e-531.16RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 181..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1191contigH-paniculata_contig1191:1594..10159 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1191.1225.1mRNA_H-paniculata_contig1191.1225.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1191 1568..10965 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1191.1225.1 ID=prot_H-paniculata_contig1191.1225.1|Name=mRNA_H-paniculata_contig1191.1225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYS
HYGYQHVDMLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRVWDGLRWDKH
LPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVA
GKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASE
LNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGA
AGGRNSREGDEDEEDDDEEELRISEERRWPTAGNGGGRYN*
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