mRNA_H-paniculata_contig1191.1225.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig1191.1225.1
Unique Name	mRNA_H-paniculata_contig1191.1225.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 410 bits (1053), Expect = 7.500e-129
Identity = 212/299 (70.90%), Postives = 244/299 (81.61%), Query Frame = 3

Query:    3 GDGAGAAFMKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYSHYGYQHVD--MLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVAGKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASELNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGAAGGRNSXXXXXXXXXXXXXXLRISEERRWPTAGNGGGRY 893
            GDGAG AFMKKYVAQPR+PEHARY KAKEM+EKK+ ++ ESLCG+WRQDFRD+I+RY HYGY HVD  +      C ACNRSN T V+AF+SG+EYDP RVWDGLRWDKHLP++WDDP A A +KQEA ATH+LGDTCKHKSHL+HSL HYKLYLVSKV+ K+R D+ L+PENFRGEG  +TS K+KKRCLNF+ENEFESLS+LL KA +LNGVKWG RAG+RGG GK FLE GA +SILDWLSGEA+ GQYG + LG   G    XXXXXXXXXXXXXX  +   RRW T G+  GRY
Sbjct:  678 GDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRY 976

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BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 1.490e-83
Identity = 142/200 (71.00%), Postives = 163/200 (81.50%), Query Frame = 3

Query:  294 RVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVAGKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASELNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGAAGGRNSXXXXXXXXXXXXXXLRISEERRWPTAGNGGGRY 893
            +VWDGLRWDKHLP++WDDP A A +KQEA ATH+LGDTCKHKSHL+HSL HYKLYLVSKV+ K+R D+ L+PENFRGEG   TS KKKKRCLNF+ENEFESLS+LL KA +LNGVKWG RAG+RGG GK FLE GA +SILDWLSGEA+ GQYG++ LG   G R +   XXXXXXXXXXX  +   RRW T G+ GGRY
Sbjct:   58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDLEGQR-AGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGGRY 256

[Close]

BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 154 bits (389), Expect = 4.880e-36
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 3

Query:    3 GDGAGAAFMKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYSHYGYQHVD--MLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRV 299
            GDGAG AFMKKYVAQPR+PEHARY KAKEM+EKK+ ++ ESLCG+WRQDFRD+I+RY HYGY HVD  +      C ACNRSN T V+AF+SG+EYDP RV
Sbjct:  706 GDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806

[Close]

BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 4.520e-8
Identity = 53/163 (32.52%), Postives = 77/163 (47.24%), Query Frame = 3

Query:    3 GDGAGAAFMKKYVAQPRLPEHA--RYSKAKEMIEKKVCVTRESLC--GTWRQDFRDSILRYSHYGYQHVDMLDTVAHCGACNRSNVTKV--VAFMSGAEYDPIRVWDGLRWDKHLPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKV 473
            G G GAAFM+K+ ++     HA   Y KA +  E +VC  RES+   G+W Q+F  ++  Y   G+        V+H G     +  +   + + S    DP       + +               SKQ+      LG  C++KSHLYH+L+HYKLYLV KV
Sbjct:  950 GGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHF-----GVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSRGGYKSKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKV 1103

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig1191.1225.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5KKK5_9PHAE	7.500e-129	70.90	DUF4211 domain-containing protein n=1 Tax=Ectocarp...	[more]
D7G8T8_ECTSI	1.490e-83	71.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G8T9_ECTSI	4.880e-36	70.30	DUF4211 domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FLB0_ECTSI	4.520e-8	32.52	RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig1191	contig	H-paniculata_contig1191:1568..10965 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Domain of unknown function DUF4211
Ec32 ortholog	Ec-15_004200.1
Exons	8
Model size	1705
Cds size	873
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig1191.1225.1	prot_H-paniculata_contig1191.1225.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig1191 1594..10159 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928908.0046906-UTR-H-paniculata_contig1191:1567..1593	1622928908.0046906-UTR-H-paniculata_contig1191:1567..1593	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1191 1568..1593 +
1691480662.8165958-UTR-H-paniculata_contig1191:1567..1593	1691480662.8165958-UTR-H-paniculata_contig1191:1567..1593	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1191 1568..1593 +
1622928908.1455493-UTR-H-paniculata_contig1191:10159..10965	1622928908.1455493-UTR-H-paniculata_contig1191:10159..10965	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1191 10160..10965 +
1691480662.9419894-UTR-H-paniculata_contig1191:10159..10965	1691480662.9419894-UTR-H-paniculata_contig1191:10159..10965	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig1191 10160..10965 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig1191:1568..10965+
coding sequence from alignment at H-paniculata_contig1191:1568..10965+

protein sequence of mRNA_H-paniculata_contig1191.1225.1

>prot_H-paniculata_contig1191.1225.1 ID=prot_H-paniculata_contig1191.1225.1|Name=mRNA_H-paniculata_contig1191.1225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=291bp
MKKYVAQPRLPEHARYSKAKEMIEKKVCVTRESLCGTWRQDFRDSILRYS
HYGYQHVDMLDTVAHCGACNRSNVTKVVAFMSGAEYDPIRVWDGLRWDKH
LPKNWDDPSAMAASKQEALATHHLGDTCKHKSHLYHSLVHYKLYLVSKVA
GKVRADASLKPENFRGEGSSRTSAKKKKRCLNFTENEFESLSSLLEKASE
LNGVKWGARAGIRGGGGKMFLESGAGTSILDWLSGEARPGQYGEVQLGGA
AGGRNSREGDEDEEDDDEEELRISEERRWPTAGNGGGRYN*

mRNA from alignment at H-paniculata_contig1191:1568..10965+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig1191.1225.1 ID=mRNA_H-paniculata_contig1191.1225.1|Name=mRNA_H-paniculata_contig1191.1225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9398bp|location=Sequence derived from alignment at H-paniculata_contig1191:1568..10965+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCGACGGTGCAGGCGCAGCGTTCATGAAAAAATATGTGGCCCAGCCC
AGGCTCCCCGAGCACGCGCGGTACTCAAAGGCCAAGGAAATGATCGAGAA
GAAGGTGATGACAGTATACAGATACAGTACGTATGTTGGATATTGAACAG
CGCATTATCCCCACTCGGTCATTCATCTCCACCTGAAAAGACAGCACAAA
TCAACGCTTCATTACAGGATTGAGGAAATCGGGTATGAGGGAAGCATCAC
TGTTCAAACAGAGAGTACACACAGCACAGACAAGGGCTCGGTACAGTTTT
GCGCACAACCCCCGCACGAAGCACTCCACATTTCAGATTTTTTTTTTTTT
TTGTTCCGAAACAAGCTGTTGAGAAAATGTTCGAAGTGCTTTTATTTTAG
GCGAAATTATATTCATCAAGATATGTAAACTCGGCGTCGCACGTCTCTCT
ACCGAATACCACCGCTTGTGAATTTGTCAAGCAATGTCGTATTGGTGTCT
CAATAATACATCCAGCGGCCGCCGTGCTCTACAGACAACGAGAAGACCTT
CCGAGTGGATTTGCCGCGAGTGAGTGCCGTATACTAGAGCATCGGTCGCG
AGGTTGGGCTATGTATTGATACATTTGAGAAACGATTTTGGCTCGTGTTC
TCATATTCCATGCAATTCCACGGAGTAAAAAGTTTTGAACATATTCGTCG
AAAACAGCTCAAGATACACCGATTCAGAGAATAACGCAGTCGTGGATGAG
CTGCTTATGGTCAGCAAAACGCGGGTCTGTGCCCACGCCGACAGTTTATC
GTGGGCAGGGACTGTATCTTTGCTGCCCCTTGGAAGCTTATCCGTGTCTA
GTCTTTGTCCTGACGTTGTCAAAATACCGTAATATCCTTTCGTATCGCAC
CCCCTGACATTATTTTCCGAACCTGGTTCGTGAAGCAAGAGCCTGCACTG
TCGAAATAGCAGGTCTCTCGAAAGATTGCAACAGGATCTTTCCAACGATA
CCGCTGTCGGTGTCATTGGCACCACCGTTGTCGAGAAAATTGAGTGTGAA
AATTGATGTCAGCGGGTGCGCGATATCAAAGGGCGTTACGGTTTTTCGTG
TTGGGTTTTCGACAGTACTTTCGGCAACTGACATTTCCATCTGATGAGAG
GAAGATTCTGGAAGGTTGGAAGAATCTGGTTTTTGTCGGACGGAGAATTA
TAAGTGAAAGTTGCATGTTGGGCATTAAATGTTGGAAGAATCTGGAACTT
ATGGGACCCAGAATTAAAAAATGAATGTTGCATGTTGGGGCACCATACCG
TCGAGCTCCCAGACTGTAGTCACAATCGGGACACGCAAACGTTAAGAGGG
CAGAGAGTCGACTTACTGGCACACAGGAAGCGGTTGTGCGCCTAGACATA
CGCGTCTCTTGCCTTAGACACCTCATACCCACGTGCCATTTGCCTTTGAA
GGGCACATCGGGAAGAGGTATAGCTACAGATTTATTTATTTTCAAATAAG
TCTATAGCTTGGGGTTTATTTGGTATTTGTGTGTTTTGGGGTGGGTCACC
CTTCCCTAAGATGGTTGACACGACCAAGTAATATTACTCGTCGTAGGGTT
GTAAGGAAGTATAATACTTGGGGGCGGGTCACACAGAAGGGAGTGTAACA
GATTTGGGAACCCACCGGATAATATTGCTACAGCTCAACATGAAGAATAT
TACCAGTTCAAAGGCAAAACAAATAGACAGTTTCAGCCCCTCCCTCGTAC
GTTGAATTTCGAAATATGGCTGATATGGATGAGATTTTTGGCCGAGTATT
AATGCAAATGGCAACGCGTCTGGGCTGAGTAATGTGTGTACAGCAGTACA
TTCGAGATACTACAGCGTTGCAGCCAAGATGTGTCGTCGACGTTGTATCC
TTGCAAAACGTTTAGGCCGTATCTATGTGGTTCAGAAGAACGACGTTTCC
AAAATGTTACTGACACCCAGTTCAATATTACGACGGTGTTCCTGTCATGA
TTTAAAGGCAGCGCGGCCAACCGTTGATTGTGCAATATTTTGCTATCACC
TCCCGCCGTCTCATGACCGTGAGCATACAAACGCGTCCCTCAAGTCGTTC
TAAATTTGCTAATGGGTATGTCTAGCCGTGATTGTAGGCTCCAGAGGTCT
ATAACCTCATCAGAAATGTCTTAGGTTGAGCCAAATTCGGAGAACAGAAA
ACGGTCCGTAAGCGGTAAGGCTTGGTATGTCATATGTGCGAAATGTGTGC
CAGGTGTTTATTCCTGTGTCACGATATTTACACATGTTAAGTTCGCTGTT
GTGTGATATTTATAGTCCCCATTAGTTGGAGTAATATAGAGATATCCACC
TGCCATTTACTTTCCAGGCTATTCTCTGCGTCTTGCTGCCTGGTCGTGGA
CAGGGCTAGTTGCCAGTTGTATCTAGGCTGCAAACACGCCGCCCTCACCC
CACCCCACCCCAACCTCAATTTTGTCCATCTGTAGAAATAGTCACTCGGG
AGCAATAAATGACTCAGCATGCGTCCGAATTGAGTGATGGTTGTTGACAT
GTTTTTTTTTTACTTATTCCCCCCCGCCCTCCTTCCTTGTGCTTCGTTTT
CGGGTGCTCTCGCACTCCCTTTCCTTGGGAAATTGGTTTTATCTGAACCG
GACTGGCTGCTGGACTTGCCTGACGCGGTAGGTGTGCGTCACCCGAGAGA
GCTTGTGCGGCACCTGGCGCCAGGATTTCCGGTGAAAAAAAACGTGGAAC
GGCCAGAGAGAGCGGTTGAAATGTTTTGCCCGATTTAGAAGGGAGCCGGC
CGTTGTTCATGATACTTTCATGTCCAAATCGACCATGGTGTCCGTATTGC
GATATTATGGGAAGGGGGTGGGGTGAGGGGGCTACAATGTTTCCGCCCGG
AGTCACTCTTACAGACGTCGTGTATATCTTTCACCGTCTCTTTGAGATTG
AGATTACCTTTTGTAATCATGAACGACAAAAACTCTCTAAGTTTGTACAA
ATTGAGACACTGGCGAAAGGAGAATTATACATCTTACTGACCTGAAAAAG
GAATGTTGTGTGTTGCCACTCTTGGTAGTGCATGCTCTAAAACGAGACGG
AGCTCCGTGTGGTTGGACGACTCCACACGTGCTCTTTTCGTATGATTATC
AATATAGGCGATTATTCCTGCAGTCAAGTCCTCAATGCGCATGAAATTGC
GGCCAAAGGATTTCATTCATACTCGTCATGGGCAATTGGGAGAGTGGATT
CAGACCCCGTGGCTGCGTCAAATGCATCAATAATTTTACCCCCCGAATCC
ATTTTCAAGACCAGAATGGCATCTGACCAAAAATGTCGAGCGTAGTAGCC
GTTTTGGGCGTAGAACCATGCCAAATATTTATGCCTAACTGTACTGTCTG
CACTGTCTGTCGTGGACTGTATCTCAATAGCGGCGGTTACCTACTCCCGT
AGTCATGTTATTGCGCCCTTTCCCCCTGTTTTTAGGTGGGGATTAGACGG
AGTTCGGGGGTGAACGGGTTCAGTAATAGTATGCGAGGCATGGCACACAT
CGTGAACCCCCCCCCCCCCCCGACCGGCTTGAGAAAATATCTAAACGTAT
GTCCAATCTGTTTGATGGTTTGCCTCACGTCGTCTAGTTGCACGTTTTGT
CACGTACACCTGTTTGCTTGTTGGGTGGCTTAATGTCGACATGGACATAA
CCAGGGACTCCATCCTGAGGTATTCGCACTACGGCTATCAGCACGTGGAT
ATGTTGGACACCGTGGCCCACTGCGGCGCGTGCAACAGGTCAAACGTGAC
CAAGGTGGTTGCTTTCATGTCTGGCGCCGAGTATGACCCCATCCGGGTAA
GCAACTGAAGCATATCTCGGAGCGTGGAGCATCAACCGAGACAGCCGTCG
TGTAAAAGTTTATTTTGTAGTCAAGAACAAAAAAGAATACAGCAAGTGTA
TTTATTATTTGTGGGCAACTAGTTACTAGTTGTTGTCATGCGATAGGTTT
TGTACAGGCGATTGTTGGGTGATGGGGGATGGAGAGGGCATGCATCTATC
TCATTAGTGTAAGGTTTGGAAATATAGCGTTGATTGAAAAGTATGTAAAG
AAAGAAGCAGAGTATTTGTTAGAATACATTACAAAAACCGTCGAACAAGA
TGGAGGCACGTTCAGGATCTTCAAGTTACTGGATTGCTTACTCACAAGCT
GACCGAACTGGGGTGGGTGGAGTCCTCAAATTTTGTATGACGTAGGTGTC
AGGGCATTGGCCACGCTTCCTCAGAAGAACGGAGCTTTGTTTCTATCAAA
GTGATTTCCGACGGCGATTTGTTCTTCCCTACGTTGGCAAGTGTGGCTCA
AGGGAATTTTTCATATCCTACGTCCCTCAATGTCCGCCTTTTCAGGTCAT
TTTCTGTCTCTTAGAACCGAGGTCACCATATTTTCGCGATCCCAGGATTA
ACGGATCTCTCTATCGCATCCTTCAATTTCCTCCAATTCACTCATGTACA
TGCCTTTCTCTCTCTTTCTCTTGTAGAGGGTTTTTTCTCACCACGTGAAT
TCGTTCCTCACACGAATACGACTGTCACGTTCAATCTTTGTATCGTCGTC
CATGTCTACTTTCCTCAATCGTTTCTTACATTCTTGAGGTCAACACCCCC
CGTCGTAGATTTGACTTGTCACCTCGTGCAGGCACGCAAAACCCCATGGA
TATATTCCTTAATCCAATCTTCGGTATGTAGACCTTCCTTTCTCGCGGTT
TCTCTTCTCAGTTCTTATCTGACTTGTGTTGCACCCTCTATATCCTCCTT
GAATTAACCCATGGTCTTAGTCTTCAGCGTTTCGTCCTTGGAGAGTTCCA
GTTCTTTTCATACATTCTTTATTCTCGGGGAAGTCTTTCGCCTATCTGAA
CTCTTTCCTGCGCTGTTCCGTTGTAATTTTGGAAGTTTCGTTTCTCCTGT
TTCATGCAGCCTGTACTGCCATTAAAATCTTCACTCCTCTCCTAGACTTG
AGGGAATATATACCCGATTCTGCTCTTAGTGTTGCATTGCTAGTGCCCTC
GGACATCGTAATCTCACCCTCGCTGCTTTCACTCCAAATACTTGTACTTT
CAAACTCTTGGGCTATCTTCTGCTGGAGTGGGGGAGAAGTTGAGTCACGC
TCGTGCGAGCGGTCACACAAACATCGTGACCGCCGCAACCTTCTTGTCCT
TTTGTCTTTCGTTCCCGTTATGTGCCATCTGGAGACATTTTGTTGATTTC
GTGCACATTTGTTTCGAAATCCGAGGAGAGAGTGTGGAAACGAAAACGGG
TAGTGTATTCCTTGTTTTGTCACCTATCACACGACGAAGACGCGCCTGTA
TGAGTTTATCAACCCTGGGTAAAGTACAGTACAGCGGAGTGATTGTACCG
TCGACCGTGAGTTACGCACGTTTGTGTGCCGATTTTCCTTTGATGGCAGG
TGTGGGATGGTCTCCGGTGGGACAAGCACCTGCCTAAAAATTGGGACGAC
CCATCGGCGATGGCTGCGTCCAAGCAGGTACCGTTTCCGTTGTTGTGACT
ATTGTTATTCTTCTTATCTAGTGTTATGGTTATTTTCGTGGAACCAGCTG
GGATGGCGCCTTCAAAACAGGTACCGTTTTTCCGTTGTCGTTTTTGTCAT
CTAGTGTTGTTGGCTGTGTGCGACTACTTTCACATCTCTTAGCTGTCTTC
TAAGTACTTTCAAATATCATGTGTTTTTCATTTGTTGAATCAACGTACAC
TACTGTAGTTTACATGCCAACCCTCCAGCCCTCACCCGTCGTGTGTCAAC
CTGTCTGAATAGGAGGCTCTCGCAACCCACCACCTAGGCGACACGTGCAA
GCATAAATCTCATCTGTACCACAGGTATGTTGACGCTGTTTTCACCGAGT
ACTATCGTGCTATTTGCGATCAATTGATTTTTTTCACAATCGTATCTTGA
GGGAAGGACTTTTATTTTCACTGTCACTTTTATGGCAGAGGTTCACCATG
TTGCAATCAGTTGGATAGTTTTTTACTGCAAGATCGCATAATAAAATCCT
CTGGCAACATTGGGTGAACGGACTTGGATATTGATACGTCGAAAACCGAC
CAACTAGCCAGTCAATCAGGAAGGCCATATAAGGTAGGACGTTGTGATGA
ATAGTGGACAACGATTTCTCCAGCAGTCGTCCATAACTGAACTGTAGTCT
CACTGGAGCCGTCAGGGGGTGCCACAAGAGCTTCAACGATCGGGCTTGTC
AATGTAGCACTAAATTGCGAGGTAACCTCATAATAGTCCTCCACTAGTTT
GGGCAGTTCGTGGAAAAGTAATCCAGTAGCTTGAAGATGGGTGCGCATAC
ATCCCGCCCTTGTATTTTACGATTGTTATGTGTTGTACGACACAGTAACT
TTTTGCTTCTACTTTTGACTGACTTTTTACCCTAATTTAGTGCATTTATG
CCAAATTTTATTCTCGTAATATGTGGATGCCATCCTACTCGTGAAGCTGT
CGTTGTAATTGGAGCGTGTGGTAGTATCGCTATGCTGAGTTTACGGTAAC
CATTGCTCCCTTAGCAATGGTTCAACAACTACGCACGCAATACGTGAAGA
CGTCCCTCCCCTTGATTATCCGCGTCATATCAACGCCGATCCTGTCACGC
TTGCGTGGAGCGCGTTGTATATAGCCTGGTGCACTACAAGCTGTACCTGG
TGAGCAAGGTGGCGGGCAAGGTTCGGGCAGATGCTTCTCTAAAACCGGAG
AACTTCAGGGGAGAAGGCAGCTCGCGGACGAGCGCCAAGAAAAAAAAGCG
GTGCCTCAATTTCACCGAAAACGAATTTGAGGTGAGGGTGGGCGGGATCT
ATCCATAAATCTCCGCTCGGGTCTTAGTTTATATTATATTTGCTGTTGAT
TTGTTTTTTCAATTTTTTTCTTGCTGCTCTGCTGTGCCCTGGGATTCAAA
AATTGGCAAACGAGGGCGGAGAACTGGTGCCTTGTGATGCGAGGACTGGT
GCCTTCTTCGTATGCCTTCGGTGCTCCACGTTCTTGTTTGCTCCCGGTGA
TACTATGCTTCCAGCGAAAAAGGCCTCTTCTCCTTGCTGTTGTTCACACA
AGTTTCACATGTCTCCCCATGCCTGTCCTTGGCATTTGGTCACATATCTC
CATTGTAAGATAACTGAGTGCACCATAAATGTTTTGTGCAGAACAAGTTT
GTTCGAGGCCTGTTCTATTTAGCAGGTAAGCATTCCAATCAGTACTCCTT
CCTCCCCCATGTTCCAACCCCGTTTGAATTATTACGCCACGATCTTGATC
ATGTTGCTGGCTGGCAGTCGCTGTCCAGTCTGCTGGAAAAGGCGAGCGAG
TTGAACGGGGTTAAATGGGGTGCTAGGGCAGGCATTCGGGGTGGCGGTGG
AAAGATGTTCCTCGAGAGCGGCGCCGGAACCTCCATCCTCGATTGGCTGT
CGGGCGAAGCACGCCCGGGGCAATACGGGGAGGTACAGCTGGGTGGTGCC
GGTGAGAGTGCATTTGGTTAGATGGCGGGCTAGTGTAGTGTATGCTCTCA
CTGCTGCCCCTCGATATGTGTCCTTGGTGGGTGTCTGTACGTTTGCGTAA
GCTATTGCTCGATGTGGCGATCTTTCACAAGGTAACATCGAATTGGTGAT
CACTGCTGGGCAATCCCTGGACTTCGCTAGTGGCGTCGACGAAAAGTACG
GTAAATCAAAGAATGAAACAGCACGATTTGACGGCGGGATTAGAGGCTCA
TGTAGAACACGCCACCCTCTGCGCCACGAAGGATGTGAAGTATTCGACAT
TCTAAAATTGTTATCACCACCTTCTTGCGTTGTAGTAACAAGTTGAGATG
TCTGTATGTGGCAAAGGGTAATGATTCTGTTGTGATGGTTGTGGAAGCAA
AGCTGTGGTGATGCCTTTCAGGATTCGAGACAAAAGTAATGTGTATTGCT
TTCAACTGACTAATTCTACACGCTTTGTGACCAGCGGGTTGTGTATTTGC
AAGCGAACTACGGTGTCGATACGAGGCCCGTCTTCTTCAAGTCGGCGGTA
TTTTCTGCCGTTGTCTTGATTTCAGCGTCTTCAGTAAATTTACCGTCTCC
AGCAACAATATACTTCGAGCGATATCACCGGTCTAGAATTGAAGGAAATA
AACCAGCCACACAATTGTACAGGCGGGAGGCCGAAATAGCAGTTAATTCC
TAACTAGGATGTATATATTTATTATATTTATCTGTTGAATGGAATGACCA
AATTGGCCTGCACGTCTTACTCAACCCCTCGCTGACAGAAACTTCCAACC
CACGCGCACTCGTTGTTCGCTCGCAAGATGACGACTCACTGCTGTAATAC
ACACTAGGCATGTACTGAAACAACTTTCCCAAACCAGACATGTATCTGCT
CCCGATCCCCTCCTCTTCCCCTTCCGCGCGCCTCGTCGTGGTTCAACGTT
CTCACTGGCACGTTCGAAAGCTGGTGGGCGAAACAGTCGAGAGGGCGATG
AAGATGAAGAGGATGATGATGAAGAGGAGTTAAGGATCAGTGAGGAAAGG
CGATGGCCGACCGCCGGCAATGGTGGTGGGAGATACAACTAAGCAAGCTC
TCGGCACTCTGATGGCATTTCTATGTGATTTAGTGTCGGACCAAGCGGCG
TCCGGATCGGGCCTGGCTCGTCTCACATCGGCGCTAGTTTTCAGCATGTC
AAGACGTGGGGAAAGTAGCTCTGGCTTATGTTGGCTACCAGAAGTCGTGC
TACCTAACCTGCAGCTTTACTTGTGGAGGCAAGAAAAGGCACAGAACGGG
CAATTAGCGATAGTGATAGACACAGCGAGTGCCGTCGCTTCGTACTGGTT
ACGTTTTCGGTTGTAACGGTGCTGCCAGTACCCGCGTCCACGGCCTCCTG
GAAACAGTGAGCCACCTCCCGACGTTACAGCGGGTCCTTTTAACGTTCCA
TCTCTCCTTTTTCATCGTGGGAGGATAATTCTTAGCATTATTAGGGACTT
GTTTTTAGTGCCTATATCATCCTTCGGACCACGAAGTGTTAAGGATCCTT
CCCTGCCACGAGAGCTACATACTGTCGCAAATGCCGCGACAGAACAAAAA
CATGATTGATTTGGACACCATCATGGATTCGAGTGGAGGGTGAACGGGAT
CAAGAGTAAATACGTGGACCCAAGGTGATGGGATTTGCTGGTGGACCGGA
ATGGTGCACGCGGTTTAGTCGTGGAGCTAGTGGCGCAGAAAAAGTACAGC
GATATTTGGTGCCAATAATTGGGCAGATCGGTACATGCGCGTGACCTTTT
CACCATTCGGCAATGCCAACAGTTCCCGCGACAACACGCAGCCAAAGTAC
GTATTTTGCATGGGCGGTGGCAGACCCTCTCCTTCATGTCGGATACAG

Coding sequence (CDS) from alignment at H-paniculata_contig1191:1568..10965+

>mRNA_H-paniculata_contig1191.1225.1 ID=mRNA_H-paniculata_contig1191.1225.1|Name=mRNA_H-paniculata_contig1191.1225.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1746bp|location=Sequence derived from alignment at H-paniculata_contig1191:1568..10965+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAAAATATGTGGCCCAGCCCAGGCTCCCCGAGCACGCGCGGTACTC
AAAGGCCAAGGAAATGATCGAGAAGAAGATGAAAAAATATGTGGCCCAGC
CCAGGCTCCCCGAGCACGCGCGGTACTCAAAGGCCAAGGAAATGATCGAG
AAGAAGGTGTGCGTCACCCGAGAGAGCTTGTGCGGCACCTGGCGCCAGGA
TTTCCGGTGTGCGTCACCCGAGAGAGCTTGTGCGGCACCTGGCGCCAGGA
TTTCCGGGACTCCATCCTGAGGTATTCGCACTACGGCTATCAGCACGTGG
ATATGTTGGACACCGTGGCCCACTGCGGCGCGTGCAACAGGTCAAACGTG
ACCAAGGTGGTTGCTTTCATGTCTGGCGCCGAGTATGACCCCATCCGGGG
ACTCCATCCTGAGGTATTCGCACTACGGCTATCAGCACGTGGATATGTTG
GACACCGTGGCCCACTGCGGCGCGTGCAACAGGTCAAACGTGACCAAGGT
GGTTGCTTTCATGTCTGGCGCCGAGTATGACCCCATCCGGGTGTGGGATG
GTCTCCGGTGGGACAAGCACCTGCCTAAAAATTGGGACGACCCATCGGCG
ATGGCTGCGTCCAAGCAGGTGTGGGATGGTCTCCGGTGGGACAAGCACCT
GCCTAAAAATTGGGACGACCCATCGGCGATGGCTGCGTCCAAGCAGGAGG
CTCTCGCAACCCACCACCTAGGCGACACGTGCAAGCATAAATCTCATCTG
TACCACAGGAGGCTCTCGCAACCCACCACCTAGGCGACACGTGCAAGCAT
AAATCTCATCTGTACCACAGCCTGGTGCACTACAAGCTGTACCTGGTGAG
CAAGGTGGCGGGCAAGGTTCGGGCAGATGCTTCTCTAAAACCGGAGAACT
TCAGGGGAGAAGGCAGCTCGCGGACGAGCGCCAAGAAAAAAAAGCGGTGC
CTCAATTTCACCGAAAACGAATTTGAGCCTGGTGCACTACAAGCTGTACC
TGGTGAGCAAGGTGGCGGGCAAGGTTCGGGCAGATGCTTCTCTAAAACCG
GAGAACTTCAGGGGAGAAGGCAGCTCGCGGACGAGCGCCAAGAAAAAAAA
GCGGTGCCTCAATTTCACCGAAAACGAATTTGAGTCGCTGTCCAGTCTGC
TGGAAAAGGCGAGCGAGTTGAACGGGGTTAAATGGGGTGCTAGGGCAGGC
ATTCGGGGTGGCGGTGGAAAGATGTTCCTCGAGAGCGGCGCCGGAACCTC
CATCCTCGATTGGCTGTCGGGCGAAGCACGCCCGGGGCAATACGGGGAGG
TACAGCTGGGTGGTGCCGTCGCTGTCCAGTCTGCTGGAAAAGGCGAGCGA
GTTGAACGGGGTTAAATGGGGTGCTAGGGCAGGCATTCGGGGTGGCGGTG
GAAAGATGTTCCTCGAGAGCGGCGCCGGAACCTCCATCCTCGATTGGCTG
TCGGGCGAAGCACGCCCGGGGCAATACGGGGAGGTACAGCTGGGTGGTGC
CGCTGGTGGGCGAAACAGTCGAGAGGGCGATGAAGATGAAGAGGATGATG
ATGAAGAGGAGTTAAGGATCAGTGAGGAAAGGCGATGGCCGACCGCCGGC
AATGGTGGTGGGAGATACAACTAACTGGTGGGCGAAACAGTCGAGAGGGC
GATGAAGATGAAGAGGATGATGATGAAGAGGAGTTAAGGATCAGTGAGGA
AAGGCGATGGCCGACCGCCGGCAATGGTGGTGGGAGATACAACTAA