prot_H-paniculata_contig501.12249.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig501.12249.1
Unique Nameprot_H-paniculata_contig501.12249.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length388
Homology
BLAST of mRNA_H-paniculata_contig501.12249.1 vs. uniprot
Match: D8LTE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE0_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 3.270e-41
Identity = 161/258 (62.40%), Postives = 179/258 (69.38%), Query Frame = 0
Query:    1 MRSAVALLGLMLATAQAFYVPVQTRNSAVNAKPS-FFGQS--VASRNVATARPTQLRASLEDIEKRLLEQEKAKKAAKAPPSPAPXXXXXXXXXXXXXXXXXXXXXXKTLELKSKPAPXXXXXXXXXXXXXXASVVPSSPSSGLPTGEVAEGVALGALPWVVAPVVALGAIRPVLAKASEKRAAEAKAKAXXXEKARQADALAAATGGLSVQDEGAVKALAAVAAVCLGGLFVQPLFAPPDLAKAP--PVVQQQTKKA 253
            MRSAV LLG +LA+AQAFY+P +TR  A+N++PS F GQ+  VA R   +AR   L ASLEDIEK+L+  EKA          A XXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXX        SS + TGEVAEGVALGALPWVVAPVVAL A+RPV++K    R AE KAKA    KA +A A AA   GL+  DEGAVKAL+AVAAVCLGGL VQPLFAPPDLA  P  P    QTKKA
Sbjct:    1 MRSAVVLLGFLLASAQAFYIPARTR-PALNSQPSSFLGQTAAVAPRAAPSARRAILVASLEDIEKKLIADEKAA---------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKSSSAVATGEVAEGVALGALPWVVAPVVALAALRPVISKGVAARDAEQKAKAIEEAKAAEAAARAAKMEGLTASDEGAVKALSAVAAVCLGGLLVQPLFAPPDLASLPAKPTPTVQTKKA 248          
BLAST of mRNA_H-paniculata_contig501.12249.1 vs. uniprot
Match: A0A835ZF00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF00_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.130e-14
Identity = 107/269 (39.78%), Postives = 141/269 (52.42%), Query Frame = 0
Query:    3 SAVALLGLMLATAQAFYVPVQTRNSAVNAKPSFFGQSVASRNVATARPTQLRASLEDIEKRLLEQE-----KAKKAAKAPPSPAPXXXXXXXXXXXXXXXXXXXXXXKTLELKSKPAPXXXXXXXXXXXXXXA-----------------SVVPSSPSSGLPTGEVAEGVALGALPWVVAPVVALGAIRPVLAKASEKRAAEAKAKAXXXEKARQADALAAAT---GGLSVQDEGAVKALAAVAAVCLGGLFVQPLFAPPDLAKAPPVV 246
            +++A+L ++LA A AF            A  SF G++VASR V + R  +LRASLED+E R+ ++E     K KKAA AP +PA                      X      +KPAP  XXXXXXXXXXXX                  +V P + +SG    +VA GV LG LPW+ APVVALGA+RP+LAK +  R  EA  KA   E A +A ALA +     GL+  D+  + A+ AVAA+ LGG+ V P  +    + AP VV
Sbjct:    6 ASLAVLAVILAGASAF------------APSSFAGRAVASRPVVSRRH-ELRASLEDLEARIAQREAEAAAKNKKAAPAPAAPA--------AKGSLFKAQSPKPAXXXXXXAAKPAPVAXXXXXXXXXXXXXXXXXVVKPTPPAPVAPKAVAPPAATSGASGTDVAAGVGLGVLPWLAAPVVALGAVRPLLAKGTAAR--EAVQKAAEAEAAAKAKALAESKLDKAGLTEADKKTLTAVLAVAAISLGGILVLPAISTKSESSAPAVV 251          
BLAST of mRNA_H-paniculata_contig501.12249.1 vs. uniprot
Match: A0A835ZCF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCF2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.020e-7
Identity = 50/123 (40.65%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  131 SVVPSSPSSGLPTGEVAEGVALGALPWVVAPVVALGAIRPVLAK-ASEKRAAEAKAKAXXXEKARQADALAAATGGLSVQDEGAVKALAAVAAVCLGGLFVQPLFAPPDLAKAPPVVQQQTKK 252
            SV   +   G+   +VA GV LG LPW+ AP+VALGA+RP+LAK A+           XXX           A GGL+  D+  + A+ AVAA+ LGG+F QPL +  + +  P VVQ    K
Sbjct:   54 SVTQIAADDGVSGPQVAAGVGLGLLPWLAAPLVALGAVRPILAKGAAXXXXXXXXXXXXXXXXXXXXXXXXDAAGGLTEADKKTLTAVLAVAALSLGGIFAQPLLSGGEKSAPPAVVQAAPAK 176          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig501.12249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LTE0_ECTSI3.270e-4162.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZF00_9STRA1.130e-1439.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZCF2_9STRA8.020e-740.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 172..193
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..387
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.862

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig501contigH-paniculata_contig501:9673..17009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig501.12249.1mRNA_H-paniculata_contig501.12249.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig501 8256..18271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig501.12249.1 ID=prot_H-paniculata_contig501.12249.1|Name=mRNA_H-paniculata_contig501.12249.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=388bp
MRSAVALLGLMLATAQAFYVPVQTRNSAVNAKPSFFGQSVASRNVATARP
TQLRASLEDIEKRLLEQEKAKKAAKAPPSPAPKASPTPAPKTAPTPVYKA
APTPKTLELKSKPAPVLVAPTPTPAPTPSASVVPSSPSSGLPTGEVAEGV
ALGALPWVVAPVVALGAIRPVLAKASEKRAAEAKAKADAEEKARQADALA
AATGGLSVQDEGAVKALAAVAAVCLGGLFVQPLFAPPDLAKAPPVVQQQT
KKAPAPAPAPKPEPAPTPAPAPKPEPAPAPAPAPKPEPAPAPAPAPKPEP
APAPAPAPKPEPAPAPAPKPEPVPAPTPAPKPEPVPAPAPVPTPAPKPAP
KKEAPAAPKYSGPESGRVLEAEQLDPEVLDMLKGFKK*
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