prot_H-paniculata_contig5007.12244.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5007.12244.1
Unique Nameprot_H-paniculata_contig5007.12244.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length358
Homology
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BLAST of mRNA_H-paniculata_contig5007.12244.1 vs. uniprot
Match: A0A812Y761_SYMMI (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y761_SYMMI)

HSP 1 Score: 53.5 bits (127), Expect = 1.730e-5
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0 
Query:  176 QRLEQLVAVHRALLRRYGTLELENAEARKQLHLRSERMTELE 217
            QRLEQLVAVHR LLR++ +LELEN+E RK+L LR ER+  LE
Sbjct:   37 QRLEQLVAVHRQLLRKFASLELENSELRKKLLLRDERIKHLE 78
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5007.12244.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A812Y761_SYMMI1.730e-569.05Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 185..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..32
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 172..357
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..146
NoneNo IPR availableTMHMMTMhelixcoord: 156..175
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5007contigH-paniculata_contig5007:3138..12418 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5007.12244.1mRNA_H-paniculata_contig5007.12244.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5007 3076..14760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5007.12244.1 ID=prot_H-paniculata_contig5007.12244.1|Name=mRNA_H-paniculata_contig5007.12244.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=358bp
MRLVIHKCVTSIMCLVDLICSFVPFLFLFSSAGATEIVLELVRAREAAWR
SWQLSLLQENWKSSTRAEDDKNGLVTVQKELDKKQGNPESVRWDRLADDL
QKTALLRRELEASLEAKGETDATLASERREKTAIQTVSRISPHLTSFLSI
FFLSRTFFFVFHLCSFLFFFFCSFLQRLEQLVAVHRALLRRYGTLELENA
EARKQLHLRSERMTELERQKQQCQETIKVQRAKMNRQSAELLNVKEELTE
SEKLRKQMQQAPHHAPGERRAIRGGGADHQPNEIKYVRGGGGRRSHDEAQ
PWGGSGLRVETTTASSPSMSSAGTANGEPTAAQSREKARGTSRSRSFLSR
LTSPQGP*
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