prot_H-paniculata_contig5001.12236.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5001.12236.1
Unique Nameprot_H-paniculata_contig5001.12236.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length178
Homology
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A6H5JKX4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKX4_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 9.620e-90
Identity = 149/178 (83.71%), Postives = 163/178 (91.57%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIMTGASD 178
            MVIWDLPNL RGV ALKTSRL+F Y TI+PQV+ FAKLVGQSFEVQFTIA INTILTTAGLI LG+SGPLVLSFIVF+CSFVPV+GVF+STLPM VAALGDYGMSKVFQI+LM+ GVHAVEAY LNPQIYASKLKLHPVVVIGVLY+AEHLVGVQGLI+AVP AV+VINN+I+    D
Sbjct:  387 MVIWDLPNLRRGVTALKTSRLSFAYNTISPQVSIFAKLVGQSFEVQFTIAVINTILTTAGLIALGVSGPLVLSFIVFLCSFVPVIGVFISTLPMAVAALGDYGMSKVFQILLMIFGVHAVEAYFLNPQIYASKLKLHPVVVIGVLYVAEHLVGVQGLIMAVPCAVFVINNVILGNVGD 564          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A835YJQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ5_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.920e-71
Identity = 122/175 (69.71%), Postives = 146/175 (83.43%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIMTG 175
            MV+WDLP L +   AL+ SRL F Y TI PQ+  F KL+GQSFEVQF IA  NT LTT GL+ LGISG  VLSFIVF+CSFVPV GVFLSTLPMVVAALG+YG+SKVF++++MVL VHAVEAYLLNPQIY++KLKLHP+ ++ VLYM EH+VGVQGLI+AVP AV+V+NN++  G
Sbjct:  306 MVVWDLPGLCKAGPALRRSRLGFAYDTIGPQLIKFGKLLGQSFEVQFLIALCNTGLTTLGLLALGISGAWVLSFIVFICSFVPVAGVFLSTLPMVVAALGEYGVSKVFEVMIMVLLVHAVEAYLLNPQIYSAKLKLHPITILAVLYMTEHVVGVQGLIVAVPVAVFVLNNVLNIG 480          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A6V1PBQ1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PBQ1_HETAK)

HSP 1 Score: 184 bits (467), Expect = 7.280e-55
Identity = 101/178 (56.74%), Postives = 129/178 (72.47%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTS-RLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIMTGAS 177
            M+I+D PNL      LK + RLA+ ++  AP+   FA LVGQSFEVQ  IA  NTILTT GL+ L I G +++S +VFVCSF+P+ G+ +ST PM   AL +YG+ KV Q+I MV+ VHAVEAYLLNPQIYASKLKLHP+ V+  LY+ EH  GVQGL +AVP AVY+ N +I+  +S
Sbjct:  114 MIIYDYPNLSSKFSQLKENKRLAYPFKIFAPKFKAFATLVGQSFEVQTLIALCNTILTTLGLLVLRIPGAVLMSILVFVCSFIPLAGIIISTFPMCAVALTEYGLGKVGQVIAMVVIVHAVEAYLLNPQIYASKLKLHPLFVLASLYITEHFTGVQGLFLAVPVAVYIYNEIILDQSS 291          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A2V3IVJ3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ3_9FLOR)

HSP 1 Score: 182 bits (463), Expect = 1.940e-52
Identity = 94/173 (54.34%), Postives = 127/173 (73.41%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIM 173
            M++WDLP + RGVK LKTSRL+F Y  +AP V  F  +VG+SFE Q  IA +NT LTTAGL+ L I G   LS +  VCSF+PV GVF+STLPM + AL +YG +K   +I MV+ VH +EAY+LNPQIY++ L LHP +V+ VLY+AEH  G+ GL++AVP +VY++  +++
Sbjct:  271 MIMWDLPVISRGVKRLKTSRLSFAYEELAPVVTKFGSVVGKSFEAQGLIATVNTALTTAGLLVLSIPGIGFLSVVTLVCSFIPVAGVFVSTLPMCIIALSEYGAAKAVAVIFMVILVHLIEAYVLNPQIYSAHLHLHPFMVLVVLYIAEHSYGIPGLLMAVPVSVYILRTIMI 443          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A7S3XQP3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQP3_HETAK)

HSP 1 Score: 184 bits (467), Expect = 2.130e-52
Identity = 101/178 (56.74%), Postives = 129/178 (72.47%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTS-RLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIMTGAS 177
            M+I+D PNL      LK + RLA+ ++  AP+   FA LVGQSFEVQ  IA  NTILTT GL+ L I G +++S +VFVCSF+P+ G+ +ST PM   AL +YG+ KV Q+I MV+ VHAVEAYLLNPQIYASKLKLHP+ V+  LY+ EH  GVQGL +AVP AVY+ N +I+  +S
Sbjct:  362 MIIYDYPNLSSKFSQLKENKRLAYPFKIFAPKFKAFATLVGQSFEVQTLIALCNTILTTLGLLVLRIPGAVLMSILVFVCSFIPLAGIIISTFPMCAVALTEYGLGKVGQVIAMVVIVHAVEAYLLNPQIYASKLKLHPLFVLASLYITEHFTGVQGLFLAVPVAVYIYNEIILDQSS 539          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: W7T7D1_9STRA (Uncharacterized protein family UPF0118 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T7D1_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.040e-50
Identity = 91/172 (52.91%), Postives = 125/172 (72.67%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLI 172
            M+IWDLP L RG + L  SR  + Y  +APQ+  F +LVGQSFEVQ  IA +NT+LTT GL+ L I G   +S +V + SF+PV GVFLSTLPM + A+ +YG+ K+  +ILMV+GVH VEAY L+P IY++ +KLHPV+++  LYM EHL G+QG+ +AVP  ++VI  ++
Sbjct:  541 MIIWDLPRLARGTQRLARSRFGYAYSVLAPQLTAFGRLVGQSFEVQSIIALVNTLLTTLGLVFLKIPGYGFMSLVVLITSFIPVFGVFLSTLPMALVAVSEYGVGKMIDVILMVIGVHVVEAYCLSPLIYSATVKLHPVLIVAALYMMEHLAGLQGVFLAVPVTMFVIRQVL 712          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A1X6NW72_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW72_PORUM)

HSP 1 Score: 174 bits (440), Expect = 1.960e-48
Identity = 90/175 (51.43%), Postives = 128/175 (73.14%), Query Frame = 0
Query:    3 IWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLIMTGAS 177
            +WDLP + +GV++L+ SR    Y  +AP++  FA ++G+SFE Q  IA +NT LTT GL+ LGI G   LS +  +CSF+PV GVF+ST PM+V AL D G++K   ++LMV GVH VEAY+LNPQIY++ L LHP++V+ VLY+AEH+ GV GL++AVP  V+++  L + GA+
Sbjct:  349 LWDLPRIAQGVRSLRHSRARTAYLELAPRLGDFADVLGKSFEAQTMIALVNTSLTTLGLMLLGIPGIGFLSLVTLLCSFIPVAGVFVSTFPMLVLALSDCGLAKSGGVLLMVAGVHVVEAYVLNPQIYSAHLHLHPILVLVVLYVAEHMYGVPGLLLAVPVTVFLLRQLAVPGAT 523          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A1Y1HN17_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HN17_KLENI)

HSP 1 Score: 171 bits (433), Expect = 1.110e-47
Identity = 90/172 (52.33%), Postives = 125/172 (72.67%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNLI 172
            M++WDLP L RG K+L+ SRL+  Y  IAP VATF +L G++ + Q  IA +NT+LT  G + L + G L LS +VF+CSFVPV GVFLST+P+ + AL +YG  ++  +I MV+  HA+EAY+LNP IY++ LKLHP++V+ VL  AEH +GV GL+IAVP AV+ I  ++
Sbjct:  306 MIVWDLPTLQRGAKSLRESRLSAVYEEIAPAVATFGRLFGKALQAQSAIAVVNTLLTGLGCLFLRLPGVLGLSIVVFICSFVPVAGVFLSTIPIGLVALAEYGAFQLLLVIAMVVVTHAIEAYVLNPVIYSAHLKLHPLLVLAVLVFAEHTLGVWGLLIAVPLAVFFIEYVV 477          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: A0A7S2DSY6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DSY6_9STRA)

HSP 1 Score: 167 bits (423), Expect = 4.280e-47
Identity = 88/165 (53.33%), Postives = 120/165 (72.73%), Query Frame = 0
Query:    2 VIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVY 166
            +I DLPN+ + V++L+ S+LAF Y  +AP V+ FA++VG +  +Q  IAA+NT+LT  GLI L I    VLS IVF+CSF+P +G+ LSTLPM+V AL +YGM K+  +  M+  VHAVEAYLL P++YAS  K+  ++VI VLYM EHLVG+QGL +A+P   Y
Sbjct:  237 LILDLPNIKKSVRSLRNSKLAFPYSVLAPDVSGFAEVVGDATVIQIQIAAVNTVLTMLGLIFLKIPAVGVLSLIVFICSFIPAIGILLSTLPMLVIALNEYGMQKLISVFFMIFWVHAVEAYLLYPRLYASSFKIPTLLVITVLYMTEHLVGLQGLFLALPVTAY 401          
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Match: M2VTE1_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTE1_GALSU)

HSP 1 Score: 167 bits (422), Expect = 4.070e-46
Identity = 84/171 (49.12%), Postives = 122/171 (71.35%), Query Frame = 0
Query:    1 MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIAAINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALGDYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEHLVGVQGLIIAVPFAVYVINNL 171
            +++WDLP + RGV +LK S++   +  +AP +  F  + G+SFE Q  IA  NT LT+ GL+ L I G   LSFIV +CSF+PV+GVF+ST PM+V A+ +YG+ K+  ++ MV+ VH +EAY+LNPQIY+  LKL P++V+ VLY++EH+ GV GLI+ VP  VY++  L
Sbjct:  317 LIVWDLPKIARGVGSLKRSKIGPAFMEVAPHIGEFGVIFGKSFEAQLIIALSNTTLTSLGLMFLRIPGIGFLSFIVLICSFIPVVGVFISTFPMIVVAISEYGIQKMASVVSMVIIVHLIEAYVLNPQIYSVHLKLQPLLVLIVLYISEHIAGVSGLILGVPLLVYILRLL 487          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5001.12236.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JKX4_9PHAE9.620e-9083.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YJQ5_9STRA1.920e-7169.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PBQ1_HETAK7.280e-5556.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V3IVJ3_9FLOR1.940e-5254.34Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S3XQP3_HETAK2.130e-5256.74Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
W7T7D1_9STRA1.040e-5052.91Uncharacterized protein family UPF0118 n=2 Tax=Mon... [more]
A0A1X6NW72_PORUM1.960e-4851.43Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1Y1HN17_KLENI1.110e-4752.33Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A7S2DSY6_9STRA4.280e-4753.33Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
M2VTE1_GALSU4.070e-4649.12Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002549Transmembrane protein TqsA-likePFAMPF01594AI-2E_transportcoord: 36..167
e-value: 1.5E-23
score: 83.5
IPR002549Transmembrane protein TqsA-likePANTHERPTHR21716TRANSMEMBRANE PROTEINcoord: 40..167
NoneNo IPR availablePANTHERPTHR21716:SF35PERMEASE PERM-RELATEDcoord: 40..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 169..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..95
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 96..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..168
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
NoneNo IPR availableTMHMMTMhelixcoord: 107..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5001contigH-paniculata_contig5001:10553..14306 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5001.12236.1mRNA_H-paniculata_contig5001.12236.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5001 10553..14336 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5001.12236.1 ID=prot_H-paniculata_contig5001.12236.1|Name=mRNA_H-paniculata_contig5001.12236.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=178bp
MVIWDLPNLGRGVKALKTSRLAFGYRTIAPQVATFAKLVGQSFEVQFTIA
AINTILTTAGLICLGISGPLVLSFIVFVCSFVPVLGVFLSTLPMVVAALG
DYGMSKVFQIILMVLGVHAVEAYLLNPQIYASKLKLHPVVVIGVLYMAEH
LVGVQGLIIAVPFAVYVINNLIMTGASD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002549AI-2E-like