mRNA_H-paniculata_contig500.12230.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: D7G6L9_ECTSI (BNR repeat domain protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6L9_ECTSI) HSP 1 Score: 1032 bits (2669), Expect = 0.000e+0 Identity = 482/668 (72.16%), Postives = 565/668 (84.58%), Query Frame = 1
Query: 10 VQKKKKKKELSGHDGNVVNVFTWGSGEGGQLGYELNTCPISAKVPRPAFPVGSSEEANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKN-VYSWGRNNWGQASIWKISACQKSPVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYKKGGLLVYDTLKQTMTAQDLNPDWLDTPLEFFPGQPGMTKEECQKGAPEPHMEWCMDIAPPGKDTFDSLRGGHEIVYVCRPCRRDRVCLACARRCHASHHIDPAYRLRNSSKLCDCSATPGMCICKWSPMRDHFRRMTAAGSKPGTSSLDEDGSLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTQGGEVHWINFIPFERWYEEYFRRIDVALDEANS 2010
+Q++KKK + DG VVN FTWG+G+GGQLGY L+ PI+ VPRPAFP+G+ +V+RAAAGGRHSLFLL G+VL+CGVWDDGQLGCMD P+VL PG+++E+ VPKSLVPRG+ +PVPV+VP K++VKEL AGFASSFL+TDFGEVWSWG GK+GCLGLGD+++RW+P RIPLFAE++P T E +SAGKWH +C+TQK + VY+WGRNNWGQ + C++SPV IR T++ETPL++SAGA+HSVA+VD+ RPN RR++VA+AWGNP +GRLGS+R Q HASPMEVE+LT ALR+LKR I +SAGGTHTLAVL SGEVAAWGGG YGQLGDG MWDRPE VM TGLQGVRSVSAG RHS ALAVD AGT++W WGFNRWGELG GD SVRLQP R+GGL+GCTVQ V AG+RH+IALTNGKALRVKDL +YRGFI+AYKKGGL+VYD LK+TM Q LNPDWLDTPLEFFPGQPGMT EC+ G EPHM+WCMD APPGKD FDSLRGGHEIVYVCRPC+RDRVCLACAR+CH+ H I+PA+RLR+ SK CDCS TPGMC CKWSPMR+HFR MTA+G PG +L +DG LHPSELRELLQ+VRGGAAFVTSDDVD+GLA LTQGGE I ++PFERWYEE+F +ID LDE
Sbjct: 1 MQRRKKKAKEPKDDGRVVNAFTWGTGDGGQLGYGLDI-PIAQNVPRPAFPIGALAGRHVVRAAAGGRHSLFLLECGEVLACGVWDDGQLGCMDRPVVLVPGSTEEMVS-VPKSLVPRGSETFPVPVQVPPKLIVKELAAGFASSFLVTDFGEVWSWGSGKFGCLGLGDDESRWFPSRIPLFAENQPATAETVSAGKWHVLCLTQKTHEVYAWGRNNWGQLGTGEAGECERSPVAIRWTKRETPLKISAGADHSVAMVDLLRPNQRRDIVAYAWGNPDHGRLGSERQQTHASPMEVEDLTHALRKLKRTIAGVSAGGTHTLAVLGSGEVAAWGGGMYGQLGDGHMWDRPESVMATGLQGVRSVSAGARHSTALAVDMAGTQVWGWGFNRWGELGGGDESVRLQPYRVGGLDGCTVQHVVAGERHTIALTNGKALRVKDLGDYRGFINAYKKGGLMVYDALKKTMEKQKLNPDWLDTPLEFFPGQPGMTSAECRLGTAEPHMDWCMDTAPPGKDVFDSLRGGHEIVYVCRPCKRDRVCLACARKCHSKHCIEPAFRLRDGSKPCDCSTTPGMCACKWSPMREHFRAMTASGVTPGNPALGDDGLLHPSELRELLQIVRGGAAFVTSDDVDEGLALLTQGGEKERIGYLPFERWYEEHFSKIDAELDEGGG 666
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A7S1TNR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TNR9_9STRA) HSP 1 Score: 310 bits (793), Expect = 2.230e-91 Identity = 207/633 (32.70%), Postives = 304/633 (48.03%), Query Frame = 1
Query: 64 NVFTWGSGEGGQLGYELNTCPISAKVPRPAFPVGSSEEANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPE------------------RIPLFAESEPETVEQISAGKWHT-VCITQKKNVYSWGRNNWGQ---------ASIWKISACQKS-------PVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHA-SPMEVENLTEALRRLKRKIVSLSAGGTHTLAVL-RSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSVSAGTRHSLALA----------------------VDPAGTR--------LWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYKKGGLLVYDTLKQTMTAQDLNPDWLDTPLEFFPGQPGMTKEECQKGAPEPHMEWCMDIAPPGKDTFDSL-RGGHEIVYVCRPCRRDRVCLACARRCHASHHIDPAYRLRNSSKLCDCSATPGMCICKWSPMRDHFRR 1758
N +G E G +G +L +P P F +G + V AA G H+LF L +G+VL+CG +DGQLG + + +E P P V Y +K + ASSF ++ G+V++WG G+YG LGLGD ++R+ P R PL+ + V +I+AG WH V + + ++SWGR++ GQ + I Q+ P EI + E V GAEH+VALV++ R N + +V A+ WGN +GRLG+ D + P EV L + LR + + ++AGG HTL ++ ++G++ WG G YG +G G+ WD + ++ + G HS+AL +P G +W WGFN +GELG GD VRLQP R+ + V + AG RHSI LT G A +V+D +Y+ + D + G+LVY+ LK+TM ++ LNP +LD P PGQPG +C A +P +C + P D D++ RG + Y VC+AC RRCHA+ H + +R CDC A+ C W+P+RD F R
Sbjct: 37 NSMKFGPDEEGPMGRQL--------LPHPCFSLGRLDSMAVKHAAGGAFHTLFALANGNVLACGRNEDGQLGVGEEDL-------REKWYPTPTHGVISDKYVY-----------IKMVACAEASSFAMSATGDVYAWGSGRYGVLGLGDTEHRYTPVCVNEAEGLRDPTDRKSRWRTPLWRQR----VTKIAAGDWHACVYLGDTERLFSWGRDHEGQLGRGAPFTRSMIHPDIEVQEPGDRFDALPGEIDFMKTEVCKGVDCGAEHTVALVEVERVNGKTQVTAYTWGNAEDGRLGAGADPANRHKPQEVTGLRDLLRAYRLNLQDVAAGGWHTLCLVEKNGQLIGWGRGMYGAVGYGKNWDVADPTPIPLVRAADKIVCGHNHSMALVGRGEISTEETRXXXXXXXXGERPEPRGPDEDAATQEGVWVWGFNNYGELGLGDTDVRLQPARLSPMQRAKVVDIAAGKRHSIVLTMGLARKVRDEPDYKPYFDTLMQEGILVYEILKKTMKSKGLNPRYLDQPNLILPGQPGAEDRDCPPAALDPTYRYCYNTKP--GDADDAMHRGVYRTEYRIPSLGMRSVCMACIRRCHATRHAEAVFRKHRPGDFCDCGASEH-CRAAWTPLRDVFDR 636
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A7S3JYD7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JYD7_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.850e-80 Identity = 181/543 (33.33%), Postives = 265/543 (48.80%), Query Frame = 1
Query: 460 GEVWSWGRGKYGCLGLGDEDNRWYPERIPL--FAESEPETVEQISAGKWHTVCITQKK-NVYSWGRNNWGQASIWKISACQK--SPVEIRLT----QQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVS----------LSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSVSAGTRHSLALAVDPAGT---------RLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYK-KGGLLVYDTLKQTMTAQDLNPDWLDTPLEFFPGQPGMTKEEC-QKGAPEPHMEWCMDIAPPGKDTFDSL-----RGGHEIVYVCRPCRRDRVCLACARRCHASHHIDPAY-RLRNSSKLCDCSATPGMCICKWSPMRDHFRRMT--AAGSKPGTSSLDEDGSLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTQGGEVHWINFIPFERWYEEYF 1974
GE+++WG G+YG LG GDE N P ++P+ ++ V +IS G+WH + ++ + N+Y WGRN+ GQ + + Q SP I L +Q + ++AGA H V + D R ++ +A+AWG+ + RL + +P V L+ L++ + + + GG HTL G++ AWG G +GQLG G+ WDR + V+ L GV ++AG+RHS+A+ A T R+++WGF WGELG GD V L P ++ GL+ AGDRH+I LT G+AL + Y I+ + GG + L+ +T LNP LD P + PGQPG+ ++ C + PEP +C+D P D D + R +E V C PC+ R+C AC RRCH H + P + R S C C G C KWS R F + S T SLD+ L LL ++ T DD D L +IN+ F +W+ YF
Sbjct: 1 GELFAWGSGRYGALGFGDEQNYNKPTQVPMNNLGLNKKCRVRRISCGRWHCILLSSVEGNLYGWGRNHKGQLGLGVEAVGQNIYSPTLIELEPCDRRQPSIRDIAAGAIHCVVIADRYRGKKEKDTLAYAWGDTNDSRLADANPKKFHTPQVVPALSLLLKQRRLLLAKAPCDPGDSPIIVCGGGHTLVRTNFGQLIAWGAGSHGQLGYGEQWDRQDCVLIPDLYGVIDMAAGSRHSVAIVGLDAQTDHQSNTRNGRVFTWGFGYWGELGQGDFEVHLLPTQVRGLDQSVAIACAAGDRHTIVLTTGRALSYRQDSRYADTIEILEHSGGRPLESQLRNQLTDAGLNPSALDDPDQPEPGQPGVEEKTCLPRPLPEPATRYCLDTIP-SVDPNDLVMRSARRASYETVATCNPCKIQRICRACIRRCHHGHCLVPDFCRWAPGSDQCGCLRN-GHCKAKWSAERAIFDNLVDQTHPSAEETISLDQ--------LDHLLDLLHPDENL-TEDDYDSAHVALRSSSR--YINWFQFNKWHTPYF 530
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A836CAC7_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC7_9STRA) HSP 1 Score: 280 bits (715), Expect = 7.490e-80 Identity = 178/513 (34.70%), Postives = 270/513 (52.63%), Query Frame = 1
Query: 58 VVNVFTWGSGEGGQLGYELNTCPISAKVPRPAFPVGSSEEANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKS-----------------------------------LVPRGAMAYPVPVKV-PAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQQ-ETPLQVSAGAEHSVALVDIRRPNNRREVV-AFAWGNPANGRLGSQRDQLHAS----PMEVENLTEALRRLKRKIVSLSAGGTHTLAVLR-SGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNG--CTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYKK-GGLLVYDTLKQTMTAQDLNPDWLDTPLEFFPGQP 1458
+VNVF+WGS GQLG+ +T + +PRP F +G++E +VI AA G RHSL LL +G VL+ G D+G+LG P G ++ P S P YP PV++ V+ L G A+S+ LT FG++++WG G+YG LGLG E + P R+ + P ++ ++AG+ H V + + Y+WGRN+ GQ + + + +P + + +TPLQ++ GA HS+ +V ++ PN + + + WG+ +GRLG+ + A+ P+E+E +T LR+ R +V+++AG H++AVL + EV AWG G YGQLG+G V GL V ++ AG RH+ A+ AG L++WG+N WGE G G CS P+ + GL +V V AG RH++ALT+G+AL +D YR F D GG + L++ M +DL+ D L+ P P QP
Sbjct: 20 LVNVFSWGSAADGQLGHG-DTSDVYQSLPRPIFSLGTAESGSVIAAAVGPRHSLLLLKNGFVLAMGAADNGRLGTA-APAASDSGDGLKVQAPSTVSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPMRQHNYPAPVRLLQPSHKVRALACGGAASYALTAFGDLYAWGCGRYGALGLGHEADAHAPTRVAIALSGRPLPIKAVAAGRSHCVVLAEGNRAYAWGRNDRGQVGVGGGAHAEAAPRAMGWSPATQTPLQIACGAHHSLCVVAVKAPNRKAAALRVYGWGDAGDGRLGAAAARSGAAFVDRPVEMEAVTALLRKSGRAVVAVAAGSAHSMAVLDVTREVIAWGQGLYGQLGEGSNRSTDIPVYVRGLSDVVTLVAGDRHNAAIC---AGGALYTWGWNNWGEAGVGTCSCLQTPKEVLGLAAYNTSVLSVAAGGRHTVALTSGRALLARDSPAYREFQDTLAAPGGYVARGALREAMRRRDLDSDLLERPSAPLPRQP 527
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A812V1E0_SYMMI (PRAF1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1E0_SYMMI) HSP 1 Score: 205 bits (521), Expect = 3.610e-55 Identity = 152/498 (30.52%), Postives = 228/498 (45.78%), Query Frame = 1
Query: 415 ELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRL-------TQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSVSAGTRHSLALA----VDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYKKGGL-LVYDTLKQTMTAQDLNPDWLDTPLEFFPGQPGMTKEECQKGAPEPHMEWCMDIAPPGKDTFDSL---RGGHEIVYVCRPCRRDRVCLACARRCHASHHIDPAYRLR-NSSKLCDCSATPGMCICKWSPMRDHFRRMT--AAGSKPGTSSLDEDGSLHPSELRELLQVVR 1854
+LVAG+ G ++S+G GK+G LG GDE+ P ++ V+Q++ GK+H +C T ++SWGRN GQ + KSP+E+ T +E L ++ G HS+A+V ++R +N + WG+ G+L S+G + L V +V WGGG YGQLGDG WD P + ++ V +SAG RHS +A +D +W WG N +G+LG GD +RL P + V V AGDRH++ +T+ K L +D R F ++G LV L + ++ LD P + Q G ++ E E +++CMD +++ L R G E Y C VC+ACARRC S + R R N S +CDC T G C C W+ +R+ R+ A +P DG + P +R++L +R
Sbjct: 24 DLVAGYG--------GNLFSFGLGKFGILGHGDEETWQLPRQVMSLQRHR---VKQVALGKFHALCTTYAGKLFSWGRNEKGQ-----LGRGHKSPMEVTPGLVADINTDREHTLDIACGLAHSLAIVRMKRRDNSVNDYVYGWGDYECGQL-------------------------------SSGFHNMLLVGPVRQVITWGGGLYGQLGDGFAWDNPRPQVVPNVKNVLQMSAGMRHSAVVAGVGGLDGI-PDVWVWGDNMYGQLGLGDLDIRLSPTIMTACRRMRVTGVSAGDRHTVFVTSHKPLVARDNPMLRDFFRILEEGASRLVRHRLGLELKRNGMDASLLDDPNKVMVDQAGKSEREICNEEFEVGLKYCMDT----RESLPQLQWRRKGLECAYECPALGLKAVCMACARRCVKSRKLFLYLRKRRNKSDVCDCR-TSGNCTCAWTLVREKIDRVVEEAVDGRP------TDGMIGPDSVRKVLVALR 462
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: F0YNA9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNA9_AURAN) HSP 1 Score: 194 bits (493), Expect = 1.020e-49 Identity = 177/637 (27.79%), Postives = 273/637 (42.86%), Query Frame = 1
Query: 61 VNVFTWGSGEGGQLGYELNTCPISAKVPRPAFPVGSSE----EANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGD-EDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVRSV------SAGTRHSLALAVDPAGTRLWSWGFNRWGELGCG--DCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKALRVKDLREYRGFIDAYKKGGLLVYDTLKQTMTAQDLNPDW--LDTPLEFFPGQPGMTKEECQKGAP-EPHMEWCMDIAPPGKD-TFDSLRGGHEIVYVCRPCRRDRVCLACARRCHASHHIDPAY-RLRNSSKLCDCSATPGMCICKWSPMRDHFRRMTAAGSKPGTSSLDEDGSLHPSELRELLQVVRGGAAFVTSDDVDDGLAQLTQG 1917
+ + WG E G+ G ++ ++ + FP E ++ R AAG HSLFLL +GD+ +CG+ D +P T AK + +V S + ++ G++++WGRG+YG LG D E + P R+ + TV +I+ G+WH V + + +WGRN+ GQ I +S PV I L + G R P+ V+A+AWG+P + RLG D H + ++ G +H L + +G + AWG G YGQLG G +WDR E V+ ++ +S + T S +LA +++WGFN +GELG G D +RLQP + L+ AG RHS+ LT+GK L G + D T + ++L D + ++F K P EP + +C+D P + + R +E V C PCR+ VC ACARRCH++H + R S C C A G C +S R F + + TSS +++ ++ RELL+++ ++ DD+D G L G
Sbjct: 1 MGAYAWGWAEDGRCGIGKK---LAIELKQTNFPAELCEFWDAHSHPQRCAAGQGHSLFLLPTGDLWACGIGTD------------EPRTVYH------------------------AK---QCIVLIDQSRYAISSLGDLYAWGRGRYGALGHDDGEQSHTLPTRLQGLKAN---TVNRIACGRWHCVALMSNDQLLTWGRNHCGQIGIGSVSRACTRPVLIEL-------EPGGG----------RSPS----VMAYAWGDPEDSRLGGV-DDSHEQTI------------------IACGVSHNLILTTAGRLLAWGCGRYGQLGYGDLWDREEPVVVPTVRSNQSPLMTEAKGSSTLCSSSLASAKKHGTIFAWGFNSFGELGLGAWDEDIRLQPVSVRALSSSNTLDCAAGARHSLVLTHGKTL-----------------SGGMHKDACLDTNSRRELRLDTKRVQEDAQYFEAL--RNKIVISYSLPFEPELRYCLDTIPADQGGLIFARRFTYESVVTCLPCRQLLVCRACARRCHSNHMTKVKFSRWTVSQNRCGC-ADSGRCRVVYSSERGIFDSLVDRSNVQVTSSENKE-TISMQFFRELLKLLH--PEGLSEDDIDSGEVALHSG 529
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A699YU27_HAELA (UV-resistance 8 protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YU27_HAELA) HSP 1 Score: 150 bits (378), Expect = 6.220e-36 Identity = 119/393 (30.28%), Postives = 184/393 (46.82%), Query Frame = 1
Query: 172 EEANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELV---AGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQ----QETP------LQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQG--VRSVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNGKAL 1305
EE ++ AAG HSL L G V S G +DGQLG G+S E++ P + + ++ K++ G S ++ EVWSWG G +G LG G+ +++ P+ I F+ +++++ G HT+ +T ++++GRN GQ + Q SP + Q Q P V+ GAEHS+A ++ +V + WG N G D+L +P + I ++ G H++AV G + A+G G YGQLG G D+P LQG V V G RH+LA D +G+ LW WG+N++G+LG GD R P + L+G + + +G RHS+A+T A+
Sbjct: 2 EEPYIVCIAAGASHSLALTDCGIVASWGKGEDGQLGH---------GSSAEVSSP-----------------QAVSSLLGKDICIVRCGAEYSLAVSKAHEVWSWGWGDFGRLGHGNTTDQFLPKPITFFSGM---IIKEVTCGDTHTLVVTDMGELFTFGRNQNGQLGLGHTED-QLSPQRVEALQVRSMQNWPGHGHCVASVAGGAEHSIAAT------SQGKVFGWGWGRYGNLGTGQLEDKLVPTPAIALDAVH--------ISKVNCGWRHSVAVSNHGVLYAFGWGKYGQLGHGDNTDQPTATPVAALQGKVVVEVVGGWRHTLA--TDSSGS-LWGWGWNKFGQLGLGDTVDRNTPCLVASLDGSGISLLASGWRHSLAVTQAGAV 347
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: R1D391_EMIHU (E3 ubiquitin ligase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D391_EMIHU) HSP 1 Score: 149 bits (377), Expect = 2.870e-35 Identity = 126/371 (33.96%), Postives = 173/371 (46.63%), Query Frame = 1
Query: 190 RAAAGGRHSLFLLHSGDVLSCGVWD--DGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDR--PEMVMTTGLQGVRSVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALT 1290
RAAAG HS+F+ G + SCG G LG + G ++ TP L G A V AG A S LT G WSWG G G LG GDE N+W P+ + FA V +SAG H++ +T V+SWG G+ Q P + + + V+AGA HS+AL + ++WG A+G+LG Q P +VE +++V++SAG H+LA+ V +WG G GQLG G + P+ + Q V +VSAG HSLA+A D A +WSWG +G LG G+ +L P++I G V V AG HS+A+T
Sbjct: 105 RAAAGESHSVFIDGVGRLSSCGSGAVYPGLLGHGE-------GVTRVNTP---TRLPLLGERAVSVS-------------AGSAHSLSLTAGGAAWSWGIGG-GYLGHGDEQNQWQPKEVEAFAGRR---VVAVSAGSDHSLALTTDGRVWSWGYGRDGRLGHGDEQR-QLLPKRVEAFAGQRVIVVTAGAYHSLALT--------ADGSVWSWGEGASGKLGHGDQQRQLLPKKVEAFAG------QRVVAVSAGTYHSLAITADSAVWSWGEGNSGQLGHGDQQRQLLPKKIEAFAGQRVVTVSAGVYHSLAIAADGA---VWSWGEGSYGRLGHGNEQRQLPPKKIEAFIGQHVVAVSAGAYHSLAIT 430
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: A0A7S0HGJ1_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HGJ1_9CRYP) HSP 1 Score: 143 bits (361), Expect = 3.820e-32 Identity = 118/412 (28.64%), Postives = 195/412 (47.33%), Query Frame = 1
Query: 67 VFTWGSGEGGQLGYELNTCPISAKVPRPAFPVGSSEEANVIRAAAGGRHSLFLLHSGDVLSCGVWDDGQLGCMDCPIVLQPGTSQEITPPVPKSLVPRGAMAYPVPVKVPAKIVVKELVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDGQMWDRPEMVMTTGLQGVR--SVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCGDCSVRLQPQRIGGLNGCTVQRVEAGDRHSIALTNG 1296
V++WG G GQLG+ K R V + NV + + G +H+ L+ +G+V + G + GQLG + T+ TP + +L + VK++ G+ + L D G++++WG G+YG LG GDE + P+ + E V ++AG +H+ I + N+ +WG +GQ + +K+P ++ QQ +V+ G H++ L + + WG+ G+LG ++ HA P+ + L ++ +S GG H+ A+ G + WGGG GQLG G + V+ L+G R VSAG H++AL +D A ++SWG +G LG D ++ P I L G V+ + +G HS+AL +G
Sbjct: 8 VYSWGQGVLGQLGHG------DEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRGNFGQLG-QGASV-----TANVSTPALVSALQGKH---------------VKQIACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVEALQGKE---VTFVAAGGFHSSVIIEGGNLLTWGGGYFGQLGHGDETD-RKAPKMVKGVQQCIAHEVACGTHHTLMLTQSQE--------VWTWGSGEFGKLGIGDEEKHAEPIMITALQGV------GVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEALRGKRVTRVSAGMHHTMAL-LDNAD--VYSWGSGEYGRLGHDDEQMQTTPFLIEQLIGKGVREISSGGFHSLALASG 371
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Match: R1BHG3_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BHG3_EMIHU) HSP 1 Score: 134 bits (338), Expect = 6.870e-32 Identity = 95/272 (34.93%), Postives = 139/272 (51.10%), Query Frame = 1
Query: 418 LVAGFASSFLLTDFGEVWSWGRGKYGCLGLGDEDNRWYPERIPLFAESEPETVEQISAGKWHTVCITQKKNVYSWGRNNWGQASIWKISACQKSPVEIRLTQQETPLQVSAGAEHSVALVDIRRPNNRREVVAFAWGNPANGRLGSQRDQLHASPMEVENLTEALRRLKRKIVSLSAGGTHTLAVLRSGEVAAWGGGGYGQLGDG--QMWDRPEMVMTTGLQGVRSVSAGTRHSLALAVDPAGTRLWSWGFNRWGELGCG-DCSVRLQPQRI 1224
+ AG + S LT G VWSWG G G LG GD+ + P+++ FA V +SAG H++ +T V+SWG ++GQ Q P I + + VSAG HS+AL + ++WG G+LG Q P +VE T ++++++SAGG H+LA+ G V +WG GG G+LG G Q P+ + + V +VSAG+ HSLALA D A +++WG G LG G D S +L P+++
Sbjct: 3 VTAGGSHSLALTADGAVWSWGWGNSGRLGHGDQQRQLLPKKVEAFAGRR---VVAVSAGVSHSLALTAGGAVWSWGDGDYGQLGHGDTQD-QLLPKRIEALAGQRVIAVSAGYSHSLALT--------ADGAVWSWGGGDYGKLGHGDQQSQLLPKKVEAFTG------QRVITVSAGGRHSLALAADGSVCSWGLGGDGRLGHGDEQRQLLPKKIEAFAGRRVVAVSAGSCHSLALAADGA---VYAWGEGEHGCLGHGEDLSNQLLPKKV 253 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig500.12230.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig500.12230.1 >prot_H-paniculata_contig500.12230.1 ID=prot_H-paniculata_contig500.12230.1|Name=mRNA_H-paniculata_contig500.12230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=671bp MRRVQKKKKKKELSGHDGNVVNVFTWGSGEGGQLGYELNTCPISAKVPRPback to top mRNA from alignment at H-paniculata_contig500:19374..23681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig500.12230.1 ID=mRNA_H-paniculata_contig500.12230.1|Name=mRNA_H-paniculata_contig500.12230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4308bp|location=Sequence derived from alignment at H-paniculata_contig500:19374..23681- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig500:19374..23681- >mRNA_H-paniculata_contig500.12230.1 ID=mRNA_H-paniculata_contig500.12230.1|Name=mRNA_H-paniculata_contig500.12230.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4026bp|location=Sequence derived from alignment at H-paniculata_contig500:19374..23681- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |