prot_H-paniculata_contig50.12224.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig50.12224.1
Unique Nameprot_H-paniculata_contig50.12224.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length497
Homology
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BLAST of mRNA_H-paniculata_contig50.12224.1 vs. uniprot
Match: D7FUD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD4_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 5.190e-42
Identity = 95/158 (60.13%), Postives = 108/158 (68.35%), Query Frame = 0 
Query:    7 VPFDFLLGEQYSGYFQAINASRDLKVTPSKLPKLFWGLSHEQRRRLATKMLE-GHIGDDLENAIRAYVGDDC--RRRPRGPTNVQPWITA---DGGEVVSLNGRGADGRPISPLRYRPRAPFLTVNSEEACLHLSDRRVEKPQERAECGPARKRREIQ 158
            VPF FLLGE+YSGY QAIN SR+LK  PSKLPKLFWGLS EQRR LA +MLE GH GD LE AIR  +  +   RR  R P+  QPW      +GG    LNG G DGRPI P R+RPR PFL V ++E     +  RVEKP ERA+CGPAR+RR IQ
Sbjct:   26 VPFGFLLGERYSGYKQAINTSRNLKPMPSKLPKLFWGLSTEQRRVLAARMLEAGHSGDSLERAIRLAIWGESSSRRSMRVPSRSQPWDNPHKIEGG----LNGIGPDGRPIVPERFRPREPFLLVKADEVHTFDAGHRVEKPHERADCGPARRRRVIQ 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig50.12224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUD4_ECTSI5.190e-4260.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig50contigH-paniculata_contig50:6174..15575 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig50.12224.1mRNA_H-paniculata_contig50.12224.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig50 5782..15721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig50.12224.1 ID=prot_H-paniculata_contig50.12224.1|Name=mRNA_H-paniculata_contig50.12224.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=497bp
MGKGDWVPFDFLLGEQYSGYFQAINASRDLKVTPSKLPKLFWGLSHEQRR
RLATKMLEGHIGDDLENAIRAYVGDDCRRRPRGPTNVQPWITADGGEVVS
LNGRGADGRPISPLRYRPRAPFLTVNSEEACLHLSDRRVEKPQERAECGP
ARKRREIQIGRWERDVLRAIRDKTDERQRPSAAFSGAGDPYRLDGRSSKN
VDLNRALGLLGVVESFARDPPYQPPDPKIVENVERVDQTYRKQVRGEGTG
GEIDPTNSRNIDDNIIRPTFQPSRSLEIEVTDDRNTKEIGQAVPVVEKVK
ALSSAPASVVTPDADPEDSVRQTVQTLLRVSSTVAMVTARPLGIKLPPIL
AVDKDEMRASALTRAKTTGRPSSYSFPERRSPLLHVFRGGGYRNSQRTRS
SCVARGSSSSCIERAIPERRLPFQDWPSTSAILDLGALSAAGSDVAPRVA
PACPSGRFAPMTEEEIALFLPNRILVQKAMRPSGNEQLDLSAAAPA*
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