mRNA_H-paniculata_contig11907.1222.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A6H5JX72_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX72_9PHAE) HSP 1 Score: 305 bits (780), Expect = 3.370e-94 Identity = 190/336 (56.55%), Postives = 222/336 (66.07%), Query Frame = 1 Query: 58 PRELVEREKERWGTGTARATERGLVDGKKEK------AATKARGGRSGKARGKKNDRGAGPMILRWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGM-PIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSS------------------AAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRKAC 990 PRE +ERE+ERWG GTARA ERG VD + K +ATK G R +A+G DRG GPM+L WRMFN+++ + DPGKD GVS LLAVV +LGI + E + TDVV+VRKSFDARTKKD EPRFSYT+DVRL A+KLRLR K+ GKLEPSP GP+FP S + D S+ + + P + TSA + A S ++P + G SVVIVGAGPAGLFAALELVE G+KPIIVERGMPVERRGR IGALF R IL+P+SNLCYGEGGAGTWSDGKLTTRIGRNS+NVRK C Sbjct: 74 PREFIERERERWGHGTARAVERG-VDNRSRKGGGRGGSATKKSGPRRPRAKG---DRGRGPMVLCWRMFNMELGVKVDPGKDFCGVSAELLAVVAGRLGI-KDEGVLADTDVVVVRKSFDARTKKDAEPRFSYTLDVRLSPKTARKLRLRTKQ-----GKLEPSPSGGPLFPASPSSDASVFSDISPDI--TSAAVSKMAALSDATPAAVAAXXXXXXXXXXXXXXXXXXXXXXXAGAPPLVTGRGGGGPSVVIVGAGPAGLFAALELVEVGMKPIIVERGMPVERRGREIGALFHRRILNPDSNLCYGEGGAGTWSDGKLTTRIGRNSDNVRKVC 397
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: D7FIX4_ECTSI (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX4_ECTSI) HSP 1 Score: 276 bits (707), Expect = 3.700e-84 Identity = 177/331 (53.47%), Postives = 203/331 (61.33%), Query Frame = 1 Query: 28 RSSGYRSDRPPRELVEREKERWGTGTARATERGLVD-----GKKEKAATKARGGRSGKARGKKNDRGAGPMILRWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRKACIVLCA 1005 RS + PPREL+ERE+ERWG GTARA ERG+ + G + +ATK G R +A K DRG GPM+L WRM+N+++ + DPGKD GVS LLAVV +LGI + E + TDVV+ RKSFDARTKKD EPRFSYT+DVRL A+KLRLR K+ D+ G P VAT XXX VV+VGAGPAGLFAALELVE G+KPIIVERGMPVERRGR IGALF R IL+P+SNLCYGEGGAGTWSDGKLTTRIGRNSENVRK L A Sbjct: 7 RSGTTSTPSPPRELIERERERWGHGTARAVERGMDNRSRKGGGRGGSATKKSGARRPRA---KADRGRGPMVLCWRMYNVELGVKVDPGKDFCGVSAELLAVVAGRLGI-KDEGMLADTDVVVARKSFDARTKKDAEPRFSYTLDVRLSPKTARKLRLRTKQG-----------------------DVMEGAGAPPVAT----------------------------------GXXXXXXXVVVVGAGPAGLFAALELVEVGMKPIIVERGMPVERRGREIGALFHRRILNPDSNLCYGEGGAGTWSDGKLTTRIGRNSENVRKVLETLVA 276
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A836CLD3_9STRA (DAO domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD3_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.890e-53 Identity = 119/250 (47.60%), Postives = 150/250 (60.00%), Query Frame = 1 Query: 223 MILRWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPES-NLCYGEGGAGTWSDGKLTTRIGRNS 969 M R +FNL++P+S DPGKDD G+ D +L+ ++ +LG++ ++ DV IVRKSFD R KKD EP+F YTVDVR++R A KL+LR+KE G++EP+ A +A +ST A V++VG+GPAGLFAAL L +AG KPII+ERG PVE RGR IGALFAR IL+ ES NLCYGEGGAGTWSDGKLTTRIG+NS Sbjct: 1 MKQRLELFNLEVPLSRDPGKDDIGIHDAVLSAISTRLGMRPDMPSLLSADVSIVRKSFDGRWKKDGEPKFVYTVDVRVDRGTAAKLKLRVKE-----GRMEPAXXXXXXXXXXXA-----------------SAVWST---------------------------EAAAPRVLVVGSGPAGLFAALALAQAGYKPIILERGQPVEVRGRDIGALFARKILNGESSNLCYGEGGAGTWSDGKLTTRIGKNS 201
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A7S1I2Y6_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I2Y6_9EUGL) HSP 1 Score: 166 bits (421), Expect = 1.740e-45 Identity = 109/254 (42.91%), Postives = 142/254 (55.91%), Query Frame = 1 Query: 232 RWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDAR-TKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKP--IIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRK 984 RWR+FN+D+ S DPGKD+ GV VL V +L ++ + + T + ++RKSFD R T+K+ EP+FSY VDV ++ D A K G+ +P P+ A P SL P C+ +VIVGAGPAGLFAAL LV+AG P +I+ERG PVE+RG+ IGALF R IL+ ESN+CYGEGGAGTWSDGKLT++IGRNS +VR+ Sbjct: 23 RWRVFNVDVTSSKDPGKDELGVHQVLHEAVCQRLRLECKD--LPVTSLTVIRKSFDGRNTRKNKEPKFSYVVDVTIDEDAAAK------------GRRKP--------PMELA---------------------------------PSESLPEPLRCAVTQR------KIVIVGAGPAGLFAALRLVDAGHGPGIVILERGQPVEKRGKDIGALFHRRILNRESNVCYGEGGAGTWSDGKLTSQIGRNSAHVRR 215
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A7S4LEA7_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LEA7_9EUGL) HSP 1 Score: 171 bits (434), Expect = 2.250e-45 Identity = 113/253 (44.66%), Postives = 146/253 (57.71%), Query Frame = 1 Query: 235 WRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDAR-TKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGV--KPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRK 984 WR+FN+D+P S DPGKDD V D L A + +LG+ TD+ +VRKSFDAR T+ EPRFSY VDV +++ L++K R + PP D++ P+V S++PP P+ D ++IVGAGP+GLFAAL LVEAG + I+ERG PVE+RGR IGALF RH+L+ ESN+CYGEGGAGT+SDGKLT+RIGRN+ VRK Sbjct: 201 WRLFNVDVPCSQDPGKDDLTVHDPLKAAIRKRLGV-------LPTDIALVRKSFDARITRHASEPRFSYVVDVVIDKALSRKARYK--------------PP----------MDLA-----PVV-------------DSTAPPPCPK---DL--------------GPIIIVGAGPSGLFAALRLVEAGAGDRVTIIERGQPVEQRGRDIGALFHRHVLNNESNVCYGEGGAGTYSDGKLTSRIGRNAVQVRK 387
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A2R6XDP4_MARPO (FAD_binding_3 domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XDP4_MARPO) HSP 1 Score: 171 bits (432), Expect = 6.040e-44 Identity = 126/322 (39.13%), Postives = 173/322 (53.73%), Query Frame = 1 Query: 67 LVEREKERWGTGTARATERGLVDGKKEKAATKARGGRSGKARGKKNDRGAGPMILR-----WRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRL------ERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRKACIVL 999 +VEREK ++ AR + D ++K RG+K D G + R WR+FN+D+P DPGKDD+ ++ L+ + L + + + ++ +VRKS DAR EP+F YTVD+ + E D + L + +K GK E + +S+ + +V + S+++ S S P++P D SS S+ A VV+VG+GPAGLFAAL LVE GV+ +VERG PVE RGR IGAL R ILDP SNLCYGEGGAGTWSDGKLTTRIG+NS +V+ L Sbjct: 119 IVEREKVKYSASEARRAQSKRGDSGRKKR------------RGEKKDSGTNSVNERSGDGHWRLFNIDVPFELDPGKDDFSLNGPLMDAIA--LLLSCRANRLHKSAFTLVRKSLDARK----EPKFVYTVDIDVRKFMETETDASSILSI-LKVVP---GKSE--------YSLSSRAPLDIVARLHDTEAVSSSSNVDERKSLSEIPSIP----DNTSSPSAPVRKGGNRAKVVVVGSGPAGLFAALTLVETGVEVTLVERGQPVETRGRDIGALMVRKILDPNSNLCYGEGGAGTWSDGKLTTRIGKNSSSVQTVLATL 406
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A0G4EJ48_VITBC (FAD_binding_2 domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EJ48_VITBC) HSP 1 Score: 164 bits (416), Expect = 3.810e-42 Identity = 114/287 (39.72%), Postives = 145/287 (50.52%), Query Frame = 1 Query: 160 KARGGRSGKARGKKNDRGAGPMILRWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQR----AEDAMTRTDVVIVRKSFDARTK-------KDVEP--RFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVR 981 K R GR+ + RG++ G + RWR+FN+ IP++ DPGKD V D LL V + G+Q + V IVRKSFDAR + D P F+Y VD+ + A +R R G EP+P G P S+A +S G+P VA +VG+GPAGLFAAL L E+G ++ERG PVERRGR IGA+ R +LD +SN C+GEGGAGTWSDGKLTTRIGRNS+ VR Sbjct: 53 KKRRGRARRPRGRRTAPTGGQRVTRWRLFNIQIPVADDPGKDSTAVWDGLLRAVAAQAGLQEDFFLGQGGAEDVKVEIVRKSFDARPRVLRRTREADGTPLLHFNYVVDIEVPLQDAVNVRRRP-------GLCEPAPQVGDRLPPSSASPLSA--GLPPVA---------------------------------------------VVGSGPAGLFAALRLAESGHPVTLIERGQPVERRGRDIGAMIHRGVLDADSNFCFGEGGAGTWSDGKLTTRIGRNSQQVR 285
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A7S0T6K1_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T6K1_9CHLO) HSP 1 Score: 153 bits (387), Expect = 1.500e-40 Identity = 114/269 (42.38%), Postives = 148/269 (55.02%), Query Frame = 1 Query: 235 WRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGI----QRAEDAMTRTD-----VVIVRKSFDARTKKDVEPRFSYTVDVRLERDLA-----------KKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVR 981 WR++++ + + DPGKD + V+ L A LG+ +R + + D V IVRKS DAR+ + P FSY +DV D+A K L++RI+ K E PPD + + D++ + A +A A A + T+P G D V+IVG GPAGLFAAL LVEAGV ++ERG PVE RGR IGALFAR +LD +SNLCYGEGGAGTWSDGKLTTRIGRNS++VR Sbjct: 29 WRLYDVKLDLEVDPGKDSFEVTSELRAAAAAMLGLPSNRKREDGSPLLKDGEGYGVRIVRKSCDARS---IPPVFSYILDVD---DIAINSATVYSGSMKPLKIRIRPK-----KFERVPPDWDLRDTTLPIDVTNPQSLQRHAPNAADAAAGPAIVAG---TIPGGGSDGDID-----------KRVLIVGLGPAGLFAALALVEAGVPVTVIERGQPVEGRGRDIGALFARRLLDGDSNLCYGEGGAGTWSDGKLTTRIGRNSDDVR 272
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: A0A7R9Y6W1_9VIRI (Hypothetical protein n=2 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y6W1_9VIRI) HSP 1 Score: 157 bits (397), Expect = 1.420e-39 Identity = 117/272 (43.01%), Postives = 152/272 (55.88%), Query Frame = 1 Query: 193 GKKNDRGAGPM-ILRWRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRLERDLAKKLRLRIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAAXXXXGAASVVIVGAGPAGLFAALELVEAG-------VKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVRK 984 G K GA P + WR+F +++ DPGKD++GVS+ LL + +LG DA T + RKS DAR K P FSY VDV L+ LR AR +L P P+ +A D+S A +A S+A S + P+ D +S A VV++GAGPAGLFAALEL EA V+ ++ERG VE+RGR+IGALF+R +LD +SN+CYGEGGAGTWSDGKLTTRIGRN+ +VR+ Sbjct: 33 GSKGGNGAVPKDVAAWRIFGVEVSPEDDPGKDEYGVSEELLCALQARLGANAPPDAATCR---VARKSVDARRGK--RPTFSYVVDVSLDG-------LRTCGAR----RLRAGPRQQPL----SAEDVSAA------AFCAADVRESSAGSPGDADSHPED--DVQTSV---------AKDVVVIGAGPAGLFAALELAEAAAAARGSNVRIRLLERGKGVEKRGRSIGALFSRRVLDADSNVCYGEGGAGTWSDGKLTTRIGRNAASVRR 267
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Match: D8S019_SELML (FAD_binding_3 domain-containing protein n=5 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S019_SELML) HSP 1 Score: 151 bits (382), Expect = 1.360e-37 Identity = 106/255 (41.57%), Postives = 144/255 (56.47%), Query Frame = 1 Query: 235 WRMFNLDIPISADPGKDDWGVSDVLLAVVTDKLGIQRAEDAMTRTDVVIVRKSFDARTKKDVEPRFSYTVDVRLERDLAKKLRL-----RIKEAR*NNGKLEPSPPDGPVFPVSTARDISLVTGMPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSS-CSSAAXXXXGAASVVIVGAGPAGLFAALELVEAGVKPIIVERGMPVERRGRAIGALFARHILDPESNLCYGEGGAGTWSDGKLTTRIGRNSENVR 981 WR L++ + DPGKD + +S LL V++ ++G + A ++R + +VRKSFDAR K +EPRF YTVD+ + R ++++ R R+K+ + G +E F A + LV + G FPS C S+ V++VG+GPAGLFAAL L E GV+ +VERG PVE RGR IG+L R IL +SN CYGEGGAGTWSDGKLTTRIG+NSE+V+ Sbjct: 33 WRFSRLEVAVENDPGKDCYDISPGLLQVLSKRIGCKSAH--LSRDALSVVRKSFDAR--KVIEPRFVYTVDLNVTRLVSEQPRSWSFLSRMKQ---DPGVVE--------FLKRGAAAMDLVEMAQL------------------------GGKGFPSHHCPSSKTR------VLVVGSGPAGLFAALALAEMGVQVTLVERGYPVETRGRHIGSLMVRRILKEDSNFCYGEGGAGTWSDGKLTTRIGKNSEDVQ 242 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11907.1222.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11907.1222.1 >prot_H-paniculata_contig11907.1222.1 ID=prot_H-paniculata_contig11907.1222.1|Name=mRNA_H-paniculata_contig11907.1222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp MPIVATTSATATYSTAPSSSSPPTLPQGSLDFPSSCSSAASSSAGAASVVback to top mRNA from alignment at H-paniculata_contig11907:2942..7651+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11907.1222.1 ID=mRNA_H-paniculata_contig11907.1222.1|Name=mRNA_H-paniculata_contig11907.1222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4710bp|location=Sequence derived from alignment at H-paniculata_contig11907:2942..7651+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11907:2942..7651+ >mRNA_H-paniculata_contig11907.1222.1 ID=mRNA_H-paniculata_contig11907.1222.1|Name=mRNA_H-paniculata_contig11907.1222.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig11907:2942..7651+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |