prot_H-paniculata_contig5.12219.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5.12219.1
Unique Nameprot_H-paniculata_contig5.12219.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length512
Homology
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BLAST of mRNA_H-paniculata_contig5.12219.1 vs. uniprot
Match: A0A6H5K1Y5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K1Y5_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 4.290e-108
Identity = 209/500 (41.80%), Postives = 295/500 (59.00%), Query Frame = 0 
Query:   39 VGGKRGSFGLLRRAFQEVKRVGAAIDPNAMAEVEKAWSDLTPEIRKAAGELAQAKDQIAGLKKEVGDAWSAARRTGRGS---ETRVXXXXXXXXXXXXXXXXXMAMFDVGQLAKDAAVAAKGIVGDVLXXXXXXXXXXXEDTLDFALSEGNLREASKAWRNLLETPGVMLIARDRSMWAGAEKAMQRHLQSYMSKKSMMKAEKLMNATANYALHFAGLGRNAAKSDYEIFQELSSKMCHLQGAAEKLWPMTSRALPFLGYNDYISSMEKALRAHVVSRLTLTVTAGALLGLNPRNDPFLMTLIAAFSLGHLTKDVAVNLAIFFQKAVVET----SPSFHQRPAGSDQP--ISALDLIGELVSGTATCQEMGHRAFQFFEVMKRAV-----SSVPESA---------ASKAHTVLLTS----DVLATRVVARPAGELRMDGRMLGLTLWIASTVDRFPYDPRLL---LLVFCSVLFCLVWGW-WKLYRWSYGRRQVRRSAK 507
             GG+RG  GLL RAFQ+ KR+G  ++P+A+A  E+AW +L P++R+AA +                D W        G    ET                           L KD   AA+G+ GDV            E  L  ALSEGN+R AS+ WR LL+TPGV L+A+DR +WAGAEKA++R+L  ++S+KS  +A++ +NATA++ALHFAGL RNAAKSD+E+F+ELS K+CHLQGAAEKLWP+   ALP LGY DY   +E A+R++ +SR+T TV+A  LLGLNPR DPFL+TLIA+FSLGHL+KDVA N+A FFQK +V+      P   Q  + ++    +S +DL  ELV+GT TCQE+GH+AF FF+V++RA+     S V ES          +++A T L         L  R   R   +L+++G +L   +W+A+ +D   +   +L   L+V C ++F  +W   W+  R   GR ++ +  +
Sbjct:   10 AGGRRG--GLLGRAFQQAKRIGEIVNPDAVANAEQAWKELAPDLRQAADDXXXXXXXXXXXXXXARDIWXXXXXXXSGFGAVETDRTAADSSATFAQEREEGGSVTVGWEGLKKDIERAAQGVFGDVFGEAADEVLASFETRLSEALSEGNVRAASQLWRRLLDTPGVQLLAQDRRLWAGAEKAVRRYLSGFLSEKSAKEAQRAVNATADFALHFAGLSRNAAKSDHEVFEELSHKLCHLQGAAEKLWPLAVLALPLLGYQDYAKKLESAIRSNALSRVTQTVSATVLLGLNPR-DPFLLTLIASFSLGHLSKDVAQNMAAFFQKVLVDQVRFDQPQTKQSLSDAEGAPLLSPVDLATELVTGTKTCQELGHQAFAFFKVVQRALEGSSPSFVVESVDVNDNGVHPSTEASTALQEGRPPPQPLQQRGPRRTPRKLKLEGIVLRQAIWVAAVIDSKYFSLEVLVVCLVVGCVLVFGSIWVCCWRGLRDKRGRPRMIKKGR 506
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5.12219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K1Y5_9PHAE4.290e-10841.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 82..102
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 473..493
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..472
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 494..511
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..25
score: 0.775
NoneNo IPR availableTMHMMTMhelixcoord: 474..493

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5contigH-paniculata_contig5:51391..57720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5.12219.1mRNA_H-paniculata_contig5.12219.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5 51024..57843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5.12219.1 ID=prot_H-paniculata_contig5.12219.1|Name=mRNA_H-paniculata_contig5.12219.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=512bp
MKTRKGSIFLVILLACGDAVPRVAAEQGGEDERSPKGDVGGKRGSFGLLR
RAFQEVKRVGAAIDPNAMAEVEKAWSDLTPEIRKAAGELAQAKDQIAGLK
KEVGDAWSAARRTGRGSETRVGEGDLEGGGEGGLEEGGMAMFDVGQLAKD
AAVAAKGIVGDVLGDVTSEIASSLEDTLDFALSEGNLREASKAWRNLLET
PGVMLIARDRSMWAGAEKAMQRHLQSYMSKKSMMKAEKLMNATANYALHF
AGLGRNAAKSDYEIFQELSSKMCHLQGAAEKLWPMTSRALPFLGYNDYIS
SMEKALRAHVVSRLTLTVTAGALLGLNPRNDPFLMTLIAAFSLGHLTKDV
AVNLAIFFQKAVVETSPSFHQRPAGSDQPISALDLIGELVSGTATCQEMG
HRAFQFFEVMKRAVSSVPESAASKAHTVLLTSDVLATRVVARPAGELRMD
GRMLGLTLWIASTVDRFPYDPRLLLLVFCSVLFCLVWGWWKLYRWSYGRR
QVRRSAKIKVL*
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