prot_H-paniculata_contig5.12218.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig5.12218.1
Unique Nameprot_H-paniculata_contig5.12218.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length415
Homology
BLAST of mRNA_H-paniculata_contig5.12218.1 vs. uniprot
Match: D7FQR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR9_ECTSI)

HSP 1 Score: 342 bits (876), Expect = 1.770e-110
Identity = 208/445 (46.74%), Postives = 265/445 (59.55%), Query Frame = 0
Query:   19 LLGCLSNAFVFPGTVFHQQPSRIGGRY--GGEQLKMSSSWSPEERLEIVRNLAEWQERD-STIALAGVKILAETSAPGVLARYYESLAAGSTEQIVLVAPSCSIEGGSTDVVERALSSACSSRVYHPESEAG-DRKAPHFALWHEA-PSDAFSPSSVLQEQTATMSEASVMEEVFLWLQRTLLGMVDEEEQVFVDLGRKLLTVHKYVVANATTEAELSRTFWAEAAELSRHGTIA------KDL---------------------------------MDEKASEEQEESG----------------------GVGGGNDPREDSVLLALPGFRFKDRMEFRDFVADKLAEPLKTLSPMGREGVALFAESYAGEDMKFPVILLFPFLQQFTTPEGGYKFINGRGEVQDADEYIRNSEEKLAQEAASKLQGELLI-NPFLGPFSLPP 396
            LL   S+AFV P             RY        +S +W P E+ EI+  L +WQERD   +  A ++IL E+S   VL RYYESLA G ++Q++LVAPSC IE G T  +E ALSS+C S+VYHP+ E G   KAPH ALWH+   ++  SPS+ L+++TA++S+ +VMEEVFLWLQRT+LGMVD+EE+ FV+LGRKLLTVH+YVV  ATTE ELS+ FW EA  L++HG  A      KD                                   D+  +E  E +G                      G+GGG+DPRE SVL+ALPGFRFKDR  F +FV +KL  PLKTLSP G EG  L A  YAGED+KFPV++L P L+ F  PEGGYKFI  RGE +DADEYIR  E K+A++A  + +   +  +P  GP S PP
Sbjct:   18 LLASPSHAFVAPSPCSSSANRHERHRYRVSNANTALSMAWGPAEKAEILSGLIDWQERDVDGVGAADIQILTESSPTAVLTRYYESLAKGESQQMLLVAPSCVIESGCTTALEAALSSSCISKVYHPDVEQGLGGKAPHLALWHQGVAAEELSPSNDLEQKTASLSKKAVMEEVFLWLQRTMLGMVDDEEEDFVELGRKLLTVHRYVVVKATTEVELSQAFWQEATALAKHGVEAAAEKKKKDAEXXXXXXXXXXXXXXXXXXXXXXXXXEAERPENTDDAKTESLEVTGSTKEKEVDTEEKXXXEDVLKKSGLGGGDDPREASVLMALPGFRFKDRAVFGEFVREKLVAPLKTLSPFGEEGTELSAVIYAGEDLKFPVMILSPQLKTFEAPEGGYKFIY-RGEEKDADEYIRAEELKMAEKATERRETVAVEQDPLFGPRSPPP 461          
BLAST of mRNA_H-paniculata_contig5.12218.1 vs. uniprot
Match: A0A6H5K0A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A5_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 6.220e-63
Identity = 137/332 (41.27%), Postives = 177/332 (53.31%), Query Frame = 0
Query:   19 LLGCLSNAFVFPG--TVFHQQPSRIGGRYGGEQLKMSSSWSPEERLEIVRNLAEWQERD-STIALAGVKILAETSAPGVLARYYESLAAGSTEQIVLVAPSCSIEGGSTDVVERALSSACSSRVYHPESEAG-DRKAPHFALWHEAPSDAFSPSSVLQEQTATMSEASVMEEVFLWLQRTLLGMVDEEEQVFVDLGRKLLTVHKYVVANATTEAELSRTFWAEAAELSRHGTIA----------------------------------------------------------KDLMDEKASEEQEE---SGGVGGGNDPREDSVLLALPGFR 285
            LL   S AFV P   +    +  R   R       +S +W P E+ EI+  L +WQERD   +  A ++IL E+S   VL RYYESLA G  +Q++LVAPSC+IE G T  +E ALSS+C S+VYHP+ E G   KAPH ALWH+                  +S+ +VMEEVFLWLQRT+LGMVD+EE+ FV+LGR+LLTVH+YVV  ATTE ELS+ FW EA  L++HG  A                                                          K  +D +  +E+E+     G+GGG+DPRE SVL+ALPGFR
Sbjct:   18 LLPSPSQAFVAPSPRSSSANRHERHRYRVSNANTALSMAWGPAEKAEILSGLIDWQERDVDGVGAADIQILTESSPTAVLTRYYESLAKGEAQQMLLVAPSCTIESGCTTALEAALSSSCISKVYHPDVEQGLGGKAPHLALWHQG-----------------VSKKAVMEEVFLWLQRTMLGMVDDEEEDFVELGRRLLTVHRYVVVKATTEVELSQAFWQEATALAKHGAEAAAEKKKKDAEXXXXXXXXXXXXXXXXVAAAEVDEEDAERPDNKDGAKTESLDVTGSTKKKEVDTEGKKEEEDVLKKSGLGGGDDPREASVLMALPGFR 332          
BLAST of mRNA_H-paniculata_contig5.12218.1 vs. uniprot
Match: A0A6V2RZP2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RZP2_HETAK)

HSP 1 Score: 110 bits (276), Expect = 1.170e-23
Identity = 103/289 (35.64%), Postives = 140/289 (48.44%), Query Frame = 0
Query:   63 EIVRNLAEWQERDSTIALAGVKILAETSAPGVLARYYESLAAGSTEQIVLVAPSCSIEGGSTDV--VERALSSACSSR-VYHPESEAGDRKAPHFALWHEAPSDAFSPSSVLQEQTATMSEASVMEEVFLWLQRTLLGMVDEEEQVFVDLGRKLLTVHKYVVANATTEAELSRTFWAEAAELSRHGTIAKDLMDEKASEEQEESGGVGGGNDPREDSVLLALPGFRFKDRMEFRDFVADKLAEPLK--TLSPMGREGVALFAESYAGED-MKFPVILLFPFLQQFTTPE 345
            E V     W E +   A + V+  A+T A GV+A +Y S++  + E +V VAP      G+  V  VE AL  A + R VYHPES     ++PHFAL H A   A +     Q      +   VME++F W Q  LL   D EE+ F+DLGRK++T+ + VV  A+TEA L    WAEAA LSR G   +      A+EE              E+SVL+  P F  K    F  FV      PL   T   MG     L   ++  ED ++ P++L+ P L +   PE
Sbjct:   52 EAVSAFEAWYEGE---APSIVESTADTVA-GVVADFYGSVSTAAGETVV-VAPRVGAGWGAAQVYAVEGALRPAAAFRAVYHPESHDEGLRSPHFALHHHAGLAAAAEPPASQPLP---TREDVMEDIFTWFQNQLLRE-DLEEEEFIDLGRKMITIQEVVVCGASTEAGLLSACWAEAARLSRPGAAIQ------ANEE--------------ENSVLIVAP-FLGKGGGAFAGFVQKAFGGPLAQVTAQGMGASDGVLVCHAFPAEDGLRHPMVLVHPVLVELEAPE 310          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig5.12218.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQR9_ECTSI1.770e-11046.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K0A5_9PHAE6.220e-6341.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6V2RZP2_HETAK1.170e-2335.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..414
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..26
score: 0.51
NoneNo IPR availableTMHMMTMhelixcoord: 12..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig5contigH-paniculata_contig5:44023..50178 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig5.12218.1mRNA_H-paniculata_contig5.12218.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig5 43564..50217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig5.12218.1 ID=prot_H-paniculata_contig5.12218.1|Name=mRNA_H-paniculata_contig5.12218.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=415bp
MTNLHPWRYTLLHAVAFCLLGCLSNAFVFPGTVFHQQPSRIGGRYGGEQL
KMSSSWSPEERLEIVRNLAEWQERDSTIALAGVKILAETSAPGVLARYYE
SLAAGSTEQIVLVAPSCSIEGGSTDVVERALSSACSSRVYHPESEAGDRK
APHFALWHEAPSDAFSPSSVLQEQTATMSEASVMEEVFLWLQRTLLGMVD
EEEQVFVDLGRKLLTVHKYVVANATTEAELSRTFWAEAAELSRHGTIAKD
LMDEKASEEQEESGGVGGGNDPREDSVLLALPGFRFKDRMEFRDFVADKL
AEPLKTLSPMGREGVALFAESYAGEDMKFPVILLFPFLQQFTTPEGGYKF
INGRGEVQDADEYIRNSEEKLAQEAASKLQGELLINPFLGPFSLPPSSAP
PEEESDSDKTLEDE*
back to top