prot_H-paniculata_contig49968.12210.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49968.12210.1
Unique Nameprot_H-paniculata_contig49968.12210.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length56
Homology
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BLAST of mRNA_H-paniculata_contig49968.12210.1 vs. uniprot
Match: D7FYB5_ECTSI (Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYB5_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 2.430e-12
Identity = 37/54 (68.52%), Postives = 39/54 (72.22%), Query Frame = 0 
Query:    1 MADAVLLMPPYSSFGD--GGL-----ADEEGTEAFLRKALKGCQLPVFLYSLPG 47
            +ADAVL+MPP SSFG   GG       DE GTEAFLRKAL GCQLPVFLYS  G
Sbjct:  118 LADAVLVMPPCSSFGGYPGGRETERGGDERGTEAFLRKALGGCQLPVFLYSAAG 171
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49968.12210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYB5_ECTSI2.430e-1268.52Dihydrodipicolinate synthetase n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49968contigH-paniculata_contig49968:230..397 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49968.12210.1mRNA_H-paniculata_contig49968.12210.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49968 224..397 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49968.12210.1 ID=prot_H-paniculata_contig49968.12210.1|Name=mRNA_H-paniculata_contig49968.12210.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=56bp
MADAVLLMPPYSSFGDGGLADEEGTEAFLRKALKGCQLPVFLYSLPGERS
EKRACE
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