mRNA_H-paniculata_contig4991.12205.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4991.12205.1
Unique NamemRNA_H-paniculata_contig4991.12205.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A6H5JJJ1_9PHAE (UBC core domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ1_9PHAE)

HSP 1 Score: 323 bits (827), Expect = 8.910e-107
Identity = 161/187 (86.10%), Postives = 173/187 (92.51%), Query Frame = 3 
Query:  183 PWQVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEYDEKAL 743
            P +VENIFTS ASS VLT+DLLDIQR EQELGMEV+AVDDNIFHWKVKINRVS++SPL +DL +LR  +AYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLE+LQLSKWSSVRGMK VL G+RTALETWGRLDL SELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHA+ + DE AL
Sbjct:   20 PKKVENIFTSEASSAVLTQDLLDIQRLEQELGMEVEAVDDNIFHWKVKINRVSDASPLREDLEKLRQTYAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEILQLSKWSSVRGMKGVLQGIRTALETWGRLDLGSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHASMQCDEDAL 206
[Close]
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: D7FMN8_ECTSI (Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 1.210e-97
Identity = 166/219 (75.80%), Postives = 184/219 (84.02%), Query Frame = 3 
Query:   87 SGRGPSGSIVEDLQPIRVENLSISGAFQRVFAPWQVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEYDEKAL 743
            +G G     + +      E  +   A ++   P +VENIFTS+ASS VLT+DLLDIQR EQELGMEV+AVDDNIFHWKVKINRVS++SPL +DL +LR  +AYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMK VL G+RTALETWGRLDL SELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHA+ + DE AL
Sbjct:  185 NGTGSKEKALREEMAANKEREAKENADKKGVKPKKVENIFTSKASSAVLTQDLLDIQRLEQELGMEVEAVDDNIFHWKVKINRVSDTSPLREDLEKLRQTYAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKGVLQGIRTALETWGRLDLGSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHASMQCDEDAL 403
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BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A8B6E229_MYTGA (Baculoviral IAP repeat-containing protein 6 (Apollon) n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6E229_MYTGA)

HSP 1 Score: 196 bits (498), Expect = 5.630e-52
Identity = 90/179 (50.28%), Postives = 127/179 (70.95%), Query Frame = 3 
Query:  195 ENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEYD 731
            ENIFTS A++G+LT DL+ I   EQEL    + +DDNI++W+VKI        L +DL Q++SKF Y Y+E+E+TF +DLYPFYPPLVK++RPR Q  MM R+T++EML+LS W   + MKSV+  ++T L+ W RL++NS  ND++ +P G+Y E+EH L+ L LV+E+ P     YD
Sbjct:  619 ENIFTSNAAAGILTNDLVRIMEEEQELSFTAEPIDDNIYNWRVKIFHFDAECGLAEDLLQIQSKFGYNYIELEMTFEIDLYPFYPPLVKVMRPRLQCSMMQRVTNMEMLKLSYWIPTKDMKSVIQDIKTFLQQWARLEVNSPRNDLLKYPYGAYVEIEHHLLTLALVSEVNPRVNYLYD 797
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BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A6J8EH44_MYTCO (BIRC6 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8EH44_MYTCO)

HSP 1 Score: 194 bits (494), Expect = 3.870e-51
Identity = 89/179 (49.72%), Postives = 127/179 (70.95%), Query Frame = 3 
Query:  195 ENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEYD 731
            ENIFTS A++G+LT DL+ I   EQEL    + ++DNI++W+VKI        L +DL Q++SKF Y Y+E+E+TF +DLYPFYPPLVK++RPR Q  MM R+T++EML+LS W   + MKSV+  ++T L+ W RL++NS  ND++ +P G+Y E+EH L+ L LV+E+ P     YD
Sbjct:  195 ENIFTSNAAAGILTNDLVRIMEEEQELSFTAEPIEDNIYNWRVKIFHFDAECGLAEDLLQIQSKFGYNYIELEMTFEIDLYPFYPPLVKVMRPRLQCSMMQRVTNMEMLKLSYWIPTKDMKSVIQDIKTFLQQWARLEVNSPRNDLLKYPYGAYVEIEHHLLTLALVSEVNPRVNYLYD 373
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BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A8B8CT61_CRAVI (Origin recognition complex subunit 1 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8CT61_CRAVI)

HSP 1 Score: 192 bits (488), Expect = 4.440e-50
Identity = 88/190 (46.32%), Postives = 127/190 (66.84%), Query Frame = 3 
Query:  159 GAFQRVFAPWQVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            GA   V A   V+ +FTS  ++G+LT DL+ I   E+++G   + ++DNI+HW+VKI      S LC DL  +   F Y Y+E+E+ F +DLYPFYPPLVK++RPR QGFMM R+T++EML+LS WS  + M+SV+  ++  L+ W RL++ SE NDV  +P G+Y E+EH L+ L LV+E+ P     Y
Sbjct:  191 GAVAAVPASAAVKTVFTSSGAAGILTNDLVRIMENEKQIGFTAEPIEDNIYHWQVKIFNFDPESELCQDLSIIEKNFGYNYIELEMMFQIDLYPFYPPLVKVMRPRLQGFMMQRVTNMEMLKLSYWSPTKDMQSVIQEIKAFLQQWARLEVESERNDVQKYPRGAYLEMEHHLLTLALVSEVVPRVNLRY 380
[Close]
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: UPI00148AB298 (baculoviral IAP repeat-containing protein 6 isoform X1 n=2 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148AB298)

HSP 1 Score: 191 bits (485), Expect = 6.380e-50
Identity = 87/190 (45.79%), Postives = 127/190 (66.84%), Query Frame = 3 
Query:  159 GAFQRVFAPWQVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            GA     A   V+++FTS  ++G+LT DL+ I   E+++G   + +DDNI+HW+VKI      S LC D+  +   F Y Y+E+E+ F +DLYPFYPPLVK++RPR QGFMM R+T++EML+LS WS  + M+SV+  ++  L+ W RL++ SE NDV  +P G+Y E+EH L+ L LV+E+ P     Y
Sbjct:  186 GAVAATPAMATVKSVFTSSGAAGILTNDLVRIMENERQIGFTAEPIDDNIYHWQVKIFDFDPQSELCQDMSVIEKNFGYNYIELEMMFQIDLYPFYPPLVKVMRPRLQGFMMQRVTNMEMLKLSYWSPTKDMQSVIQEIKAFLQQWARLEVESERNDVQKYPRGAYLEMEHHLLTLALVSEVVPRVNLRY 375
[Close]
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: UPI001458A714 (uncharacterized protein LOC117326577 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458A714)

HSP 1 Score: 189 bits (480), Expect = 5.200e-49
Identity = 86/178 (48.31%), Postives = 129/178 (72.47%), Query Frame = 3 
Query:  195 ENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            + IFTS A++G+LT DL+ I   EQE+G   + ++DNI++W+VKI   +ES  L  DLR+++ KF Y Y+E+E+TF +DLYPFYPPLVK++RPR QG MM R+T++E+L+LS W   + MK+V+  ++T L+ W RL+++SE ND+  +P G+Y E+EH L+ L LV+E+ P     Y
Sbjct:  196 KQIFTSNAAAGILTNDLVKIMEGEQEVGFTAEPIEDNIYNWRVKIFNFAESD-LAKDLREIKEKFGYNYIELEMTFEIDLYPFYPPLVKVMRPRLQGSMMQRVTNMELLKLSYWCPTKDMKTVIQEIKTFLQQWARLEVDSERNDLKRYPHGAYLEMEHHLLTLALVSEVVPRVNQRY 372
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BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A1S3KE17_LINUN (baculoviral IAP repeat-containing protein 6 isoform X1 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3KE17_LINUN)

HSP 1 Score: 187 bits (476), Expect = 1.130e-48
Identity = 86/180 (47.78%), Postives = 124/180 (68.89%), Query Frame = 3 
Query:  189 QVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            Q + IFTS A+SG+LT DL+ I   EQ LG     +DDNI+ W VK+    E S L  +L ++ ++  Y Y+E+++ F +DLYPFYPPLVK++RPR QG MM R+T++EML+LS W+  + MKSVL  ++  L+ W RL++NSE ND   +P G+Y ++EH L+RL LV+E+ P A  +Y
Sbjct:  199 QAKQIFTSSAASGILTNDLVKILEEEQNLGFSADPIDDNIYQWCVKLYTFQEDSDLARELAEICARDGYNYIELQMDFAIDLYPFYPPLVKVIRPRLQGSMMQRVTNMEMLKLSYWNPTKDMKSVLTDIKDFLQQWARLEVNSERNDPKRYPSGAYVDIEHHLLRLALVSEVNPRANFKY 378
[Close]
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: A0A8J1U8G5_OWEFU (Ofus.G111954 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U8G5_OWEFU)

HSP 1 Score: 183 bits (464), Expect = 2.010e-47
Identity = 85/180 (47.22%), Postives = 120/180 (66.67%), Query Frame = 3 
Query:  189 QVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            Q   IFT+ A+SG+LT DL+ I   E+ +G     +DDNI+ W VK+   +E+  L  DL ++   F Y  +E+E+ F +DLYPFYPPLVK++RPR QG MM R+T++EML+LS W+  + MK VL  ++  L+ W RL++NSE ND    P GSY E+EH L+RL LV+E+ P A  +Y
Sbjct:  194 QAGQIFTTNAASGILTNDLVKIMEVEESVGFTADPIDDNIYKWSVKLYNFAETCDLGKDLAEVNKLFGYNNIELEMDFAIDLYPFYPPLVKVIRPRLQGSMMQRVTNMEMLKLSYWNPAKDMKGVLSDIKNFLQQWARLEVNSERNDPKRFPTGSYVEIEHHLLRLALVSEVNPRANIKY 373
[Close]
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Match: UPI000C78891B (uncharacterized protein LOC111706168 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78891B)

HSP 1 Score: 182 bits (461), Expect = 1.230e-46
Identity = 87/180 (48.33%), Postives = 125/180 (69.44%), Query Frame = 3 
Query:  189 QVENIFTSRASSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDLRQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEMLQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELEHLLMRLGLVTEIRPHATAEY 728
            Q + +FTS A+SG+L  DL+ I +     G+    VDDNIF W VK++   + + L +DL ++  +F Y Y+E++L F+MDLYPF+PPLVK++RPR QG MM R+T++E+L+L+ W   R MKSVL  +R  L TW RLD++SE ND I +P G+Y ++EH L+RL LV+EI P A  +Y
Sbjct:  217 QPKQVFTSAAASGILINDLVAIMQTRGVQGVVADTVDDNIFQWNVKLSNF-QGTKLNEDLMKVNEEFGYDYIELQLDFSMDLYPFFPPLVKVIRPRLQGSMMLRVTTMEILKLTYWDPARDMKSVLTDIRNFLSTWARLDMHSERNDKIRYPNGAYIDIEHHLLRLALVSEIVPRANHKY 395
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4991.12205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJJ1_9PHAE8.910e-10786.10UBC core domain-containing protein (Fragment) n=1 ... [more]
D7FMN8_ECTSI1.210e-9775.80Survivin n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A8B6E229_MYTGA5.630e-5250.28Baculoviral IAP repeat-containing protein 6 (Apoll... [more]
A0A6J8EH44_MYTCO3.870e-5149.72BIRC6 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A8B8CT61_CRAVI4.440e-5046.32Origin recognition complex subunit 1 n=2 Tax=Crass... [more]
UPI00148AB2986.380e-5045.79baculoviral IAP repeat-containing protein 6 isofor... [more]
UPI001458A7145.200e-4948.31uncharacterized protein LOC117326577 n=1 Tax=Pecte... [more]
A0A1S3KE17_LINUN1.130e-4847.78baculoviral IAP repeat-containing protein 6 isofor... [more]
A0A8J1U8G5_OWEFU2.010e-4747.22Ofus.G111954 protein n=1 Tax=Owenia fusiformis Tax... [more]
UPI000C78891B1.230e-4648.33uncharacterized protein LOC111706168 n=1 Tax=Euryt... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4991contigH-paniculata_contig4991:1543..7706 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.2
Seed ortholog evalue5.3e-87
Seed eggNOG ortholog2880.D7FMN8
KEGG koko:K10582,ko:K10586
KEGG Pathwayko04120,ko04214,ko04215,map04120,map04214,map04215
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0895@2759,KOG0897@1,KOG0897@2759
EC2.3.2.23
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons6
Model size1244
Cds size1176
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930468.7890592-UTR-H-paniculata_contig4991:1542..16101622930468.7890592-UTR-H-paniculata_contig4991:1542..1610Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4991 1543..1610 +
1691481305.296207-UTR-H-paniculata_contig4991:1542..16101691481305.296207-UTR-H-paniculata_contig4991:1542..1610Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4991 1543..1610 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930468.8090923-CDS-H-paniculata_contig4991:1610..18621622930468.8090923-CDS-H-paniculata_contig4991:1610..1862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 1611..1862 +
1691481305.3099687-CDS-H-paniculata_contig4991:1610..18621691481305.3099687-CDS-H-paniculata_contig4991:1610..1862Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 1611..1862 +
1622930468.8219707-CDS-H-paniculata_contig4991:2120..22641622930468.8219707-CDS-H-paniculata_contig4991:2120..2264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 2121..2264 +
1691481305.3211486-CDS-H-paniculata_contig4991:2120..22641691481305.3211486-CDS-H-paniculata_contig4991:2120..2264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 2121..2264 +
1622930468.836715-CDS-H-paniculata_contig4991:3677..38291622930468.836715-CDS-H-paniculata_contig4991:3677..3829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 3678..3829 +
1691481305.3445652-CDS-H-paniculata_contig4991:3677..38291691481305.3445652-CDS-H-paniculata_contig4991:3677..3829Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 3678..3829 +
1622930468.8608623-CDS-H-paniculata_contig4991:4196..43701622930468.8608623-CDS-H-paniculata_contig4991:4196..4370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 4197..4370 +
1691481305.357764-CDS-H-paniculata_contig4991:4196..43701691481305.357764-CDS-H-paniculata_contig4991:4196..4370Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 4197..4370 +
1622930468.8846593-CDS-H-paniculata_contig4991:5559..58211622930468.8846593-CDS-H-paniculata_contig4991:5559..5821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 5560..5821 +
1691481305.3680007-CDS-H-paniculata_contig4991:5559..58211691481305.3680007-CDS-H-paniculata_contig4991:5559..5821Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 5560..5821 +
1622930468.9037437-CDS-H-paniculata_contig4991:7514..77061622930468.9037437-CDS-H-paniculata_contig4991:7514..7706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 7515..7706 +
1691481305.376977-CDS-H-paniculata_contig4991:7514..77061691481305.376977-CDS-H-paniculata_contig4991:7514..7706Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4991 7515..7706 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4991.12205.1prot_H-paniculata_contig4991.12205.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4991 1611..7706 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4991.12205.1

>prot_H-paniculata_contig4991.12205.1 ID=prot_H-paniculata_contig4991.12205.1|Name=mRNA_H-paniculata_contig4991.12205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=392bp
MAILNPSGRGPSGSIVEDLQPIRVENLSISGAFQRVFAPWQVENIFTSRA
SSGVLTKDLLDIQRREQELGMEVQAVDDNIFHWKVKINRVSESSPLCDDL
RQLRSKFAYGYVEMELTFTMDLYPFYPPLVKLVRPRFQGFMMGRITSLEM
LQLSKWSSVRGMKSVLLGVRTALETWGRLDLNSELNDVIVHPEGSYTELE
HLLMRLGLVTEIRPHATAEYDEKALWKAVGKEEEAQDKARRHWGQEKASE
SAERKRKRPAVAATGLGATTDDDDNNDDMDQNASGTDSGGGGVSGMGAWM
GSGVGSGAGGPVPMTKAQVTAATSQAKKVASGVAGAKAEVKSLVSDGAVT
VTGPEGSLLPPSGVEMGDSMVAPAMVVAGVGAVAAGGDAGGG
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mRNA from alignment at H-paniculata_contig4991:1543..7706+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4991.12205.1 ID=mRNA_H-paniculata_contig4991.12205.1|Name=mRNA_H-paniculata_contig4991.12205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6164bp|location=Sequence derived from alignment at H-paniculata_contig4991:1543..7706+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCCAAGGGAGACAACAAGAGGGGGCAGAAGAAGGTACAGTGGGTGCAGTA
CCCGGCTCGAGATGATGAATGGCTATTTTAAATCCTTCGGGACGCGGTCC
TTCTGGAAGCATCGTGGAGGATTTACAACCGATTCGTGTTGAAAATCTCA
GCATTTCTGGAGCGTTTCAACGTGTTTTCGCACCGTGGCAGGTCGAGAAC
ATATTCACATCCAGGGCGTCGTCGGGTGTGCTTACGAAAGATTTGCTGGA
CATTCAGCGCAGGGAGCAAGAATTGGGCATGGAGGTCCAAGCTGTTGATG
ACAACATTTTTCACTGGAAGGTACACAAGTATTAACTATTTTGGGTAAAT
ATCTTCGTCTGGGTACCTAATCATCCCCGAAATCCTGGTGGAGAGATGGA
TGTCCATTCGAAGGTGGACAGTCGTGGAGTTTTATCTGTTTGCTCCAGAA
CTCCTCCTCTCCTGGAGGACGAGACTCATGGTCACAAGAACGCTTGAATC
ATGAACTATATTTGATGGCAATGGAGTGGTGACCGTGGAGGCATGCCGTT
GAAACGTTATGGGATGCATTGGATCCAGGTGAAAATCAACCGTGTCAGTG
AATCGAGCCCACTGTGCGATGACCTTCGGCAGCTAAGATCGAAGTTCGCC
TACGGATATGTGGAGATGGAGCTGACCTTCACCATGGACCTGTATCCGTT
CTACCCGCCGCTCGTAAAGCTGGTGAGGAAAAGGGCAGTGGCCCCTCTCA
AAGGCAACACCTGAAAAAGGGAAGTTATCGCAAGAGCCGGAGATTGGTAT
CAACATCGTAACCGCTGTGGGAACTGTCTCGAAAACGGAGACAAAATCTC
ATACCGTCGAAAAAAACAATTCGCCAAATCGACAAAGATGTATCTCCGCA
AGACTATTATTTTTCTATTATAGTCGTTTTTCCGTAGCTTGCTAGCGCCG
TAGGTGTCGAGGTAGTCTGTCATAGCGTTTGAAATAGCGTTCGCTAGCAC
CCCGGTGATATCGATGCCTACACCCTTCGGGTTCCACGGTATTGTGGCCG
TTGGTAATTTAGAGAGGTGGATACACCACACCAATATGATGGTGCGTAAA
AACAGTTTGGGGTTGTATATCGGGGGTTCAAAACGATTCACCGTCGTATA
CGGATATGTTACGGATAAATTAGTAGTGTATCGTGCGAGCAAAGCGAGCC
GGCCACGCGAAGCAGGAGAGAGCGCTTTAGCGATGACCACAGCATGCCTA
TGCAGTCACTGAGTAGTCACTAGAGCGCACGGGGCAAAACACCGATATAG
CGTTGTCACCGGCGATCGATATGTTAAAAAAAAACGTGGAAAACATGCTG
TATCAATCGTCTTTCATACGACATAGCTCATACCGTGAAGTGTGTTGTTG
CCAATACACAGCCGTGGTGTGTTGTTGTTCACGTGTGGTCGTCTGTGTGC
GCTTGCTCGTTTTGTCCACAGTGTAGATTCAACTTGCTTAGGAACGGGGG
AGAGATTGACGTTTTGCTACCTCTCGCGACTTGGTCATGGTCTAGTCAGT
TATACAAAGTCATCATCCTATCATCCATAGCTATGATGGATTACTATACT
TGAGTGACGGTAAGATGATGACTCAAATGGAGCGGCGCGCGTTTTTCTAG
TAGGTTTAAGGTGTTACAGTTTGTTGTTCAGACAAGGCAGTACTTGTCGG
ATCTTTGGAAAAACCAAAGACAGGTGTATCCCTGGCTCCTCCTAGTCTCT
GGTCTTTCCACCCCATGCTTGTATAAAAGTGTGCTTGAACCGTTCTTTTG
CGGTCTCAACAAGTCACAGACAGGTCTGAGAAATGGAAGTTTGGAAGAAT
ATGTCAAGATTTCGGTGATTTGCACACGTTGCACAAGGAAAAACGGCATA
CTCGTTCCTCCAGGGCAGTCGTACGTACAGACGATATAACGTTCGTCCCA
GACAGAACCGGAGTAAGTAGCCTGAGATACACTACTGTACCCTCGTGCCC
AGTGAAATAAATCAACGGAGGAATAAAATAGAGTGTCTTATTTGTTTGTG
AGACACTTAACTCCGGTATATATTTCTGATGGGATCGGGTCATGTGGCGT
GTGCAATAATTAAAATTCTTGGGCTTGCTTTTTAGGTGAGGCCTCGTTTT
CAGGGCTTTATGATGGGCCGCATCACGAGCCTGGAGATGCTACAACTGTC
GAAATGGTCGAGCGTACGCGGAATGAAGAGCGTTTTGCTTGGCGTAAGGA
CCGCACTGGAGACGTGGGGACGCCTTGACTTGAACAGGTAGGCAACCCCT
TTAGCTAGTGATGAGAGTGTGGCACAATGTGCTATGTGCGCTTGGTATCT
GTAGCATCCTCACCCCCCCCAAAAACACCTATCATGAGTCAGCGGCAAGG
TGAGTTCCGCGTCTCCTATACATTCTTTACAAGACAGTGTCGACCCGGCC
CGTCTGTATGTTAATTGTTATTGAGTATATGTGACTCGTGTGACTCGTGT
GTTGTTGTTACTGTGGCATTTCAAAGTAAAAAGGTCACGTCCCACTGGTG
TAGGTACTGGCAGTATTGCATCAAGAGCTAATTTTTGTCGGAATTGTGTT
TCTCTCCTTTTTTTTTCTTTTTTTTTGCCATTTTGATTTCTGTTTTGTCA
TTAGTGAGCTTAACGACGTCATCGTCCATCCGGAAGGGTCCTACACTGAG
CTTGAGCATTTGCTCATGCGCCTCGGCCTGGTGACGGAGATACGGCCCCA
CGCCACGGCAGAGTACGACGAGAAGGCGCTCTGGAAGGCGGTGGGTAAGG
AAGAAGAAGCTCAAGACAAAGCCCGTAGGTGCGAGATGAAACGACGGTAC
GTGTTCGACTCAAGCCACATTGTGTTTCTTTCCGCGTTGGTTTTGCATAT
ATATATGTATATATATATATATTTAAAGAGAGAGATTTCCCCATATTATA
AGTCCCTCCGGACGCGCAAAATGTCTCCATATAAATATGGATCTTTTCGA
CGGGAGCAACAATGAATGATGTTTACTGGTGTAATGTATTACAGGTAATG
GATGTTACAAAAAACCGATTAATTGAATATGTGGGAATTGGAGGATTAAC
AAACTCTGGAGGAACCGGATCTCGGAACGACAAATTGCGCACCTCCCAGA
CAATTACGAATAATTGGCGTATCCGCCACGAAATTAGAAAGTATTTGCCT
GAGTTTCAGAATAAGCTCGTGTATTCTGTGTGCCCCGGACCATCCACGAC
TGCTAGTAATACTCGTAAATCGAATGGACAGGAGTGAATACTTTATTTCA
TGTGTCCGCTTATTCTGAAACTCAAGCGAATATTTTTTTACGTCCGTGGT
GAATACCCCAAGTAGTCGTATTTGTCCCGGGGGGTGAAATTGTGATGTGG
GCTCTATGACTCTCTTTTCTGTCCTTTTAGAACCCGGGAGAAGAAGGTAC
ATGATTTTACCGAGACTTGGACCCTGAGGCTTTCGTACGGTTATTCTCAC
TCGGCCGATTTCCGTTTCACGGAATTAGTCAAAACCCGAATGCAGTGTGC
GTTATGATATTGAGCGGCTGTTACTTGACGTGGGCTCCAATACAAGCACG
ATAAAGTGTGCTCAAGGAGTGTTCGCGTTTGAGTCCCATTTGCATCGTTT
GGGCGTTGGTCCGTCTGATGGAGGGCGGTGTTACTCGTTCGTTTTTTGGT
GTTGAGGGCAAAGCTCTTGTAGAGGTTAAAAATATATATGATTGTTAAAT
GAGCAGCAAGCGGACGGCTCCGGGTGGTAATCGTTGTACATCAATTTGGA
TAAGAACGAAAGCATGCGCGGCTAAAAACAAGCAAGGAAACCAGAGAGAA
AATGTGGCGGAAGATGATGTTCGGCTAGGTATAGCTATAATAGCTAGCTA
GACTCGCTAAATTGTTTCTAGTCATGGGCGTATAAAACATGTATGTTTTC
ATGGACGGGGAGGATGGATAACTAATACTATCCAACGTATGATTCGATGT
ACTATTGTAATGTCCAGGCATTGGGGACAGGAGAAGGCCTCGGAATCGGC
CGAACGCAAGCGTAAGCGCCCCGCTGTGGCCGCGACTGGCCTAGGCGCTA
CCACCGATGACGATGACAACAATGACGACATGGACCAAAACGCCTCTGGT
ACAGATAGCGGGGGAGGGGGAGTAAGCGGGATGGGGGCCTGGATGGGATC
AGGCGTGGGGTCGGGTGCGGGTGGGCCGGTTCCCATGACGAAAGCGCAGG
TTACAGCCGCTACTAGCCAGGCAAAGAAGGTTGGTTATTTGACCTGCTCT
ATTGTGGATACTGTAAGAGCCGTTGATATCACACTCCCTGATATTGTTTT
CCGAACCCGATTTTCTCGAGGAGCAAGAGCCTATGCTGCTGAGACAGCAG
GCCTATCGAAGGATCTCAAAAGGTGGTTCCAAGGATACCGCTACTGGTGT
GATAGGCACCGTCGTTGTTGAGAAAATTGAGTTTGAAGAGTGTTATAAGG
GGATGCGATATCAAAGGGTGACTATCACGGTGTTTCGGTATTGAGTTCAT
GTGGGGAATACATATGGTTTATTTGCTTCTGTACAGTTTTGTCGGGGTTG
AGGTTAGGGTGCCGGATCATGCATGGATAGATTGGATTGAGATTATGATG
ATGTAGGGGTATGTTATATGTGGGCTTGTCGGCCTGGTGTGCAGATGTAT
TCACATGGGGGTGATGGTATAGGCAGACTTGTGATGGAACACGGGGGGGG
GGGGCCTGTATTAATGTGGAAATATTCCCATCGATACATGGCAATGTGTA
TTACAATCGGTATATCTGGAAAATCGATATTTCGGTGTTTTTGGGTCATT
TTCGATCGAGCGTACATGTGTTGCTATAGTCATGATCCAATATCTGAACA
GTACTCAAGCAACAAGCAGATGAAGTCAGCATTATTAGCGGAATTGCTTT
TTGAACCTACAGGCGTCGTTTAACCGTTAGAACAAGGTGATGAAGTCCTA
TTTTGTTTTCAAGACCACGTTCTCCATTCTCGTTTTTTCTCGGATTTGTT
TTTTTGCTTGCATGAAAATGCAGAGCTCTGAGTGTACACTAGTCTTTCTC
GATTTTGAAGAAAGATGAAGCCGAAACGCGTGTTTTTTCTGGCCTCCGGT
GAGACCTCATGACCAGCTGGGGGAGGTGGAGGGAAGGGTTATTGCCTCGC
TACGATATATCGGTAAATGTACTCGTGCATTGGCTTCGCCAGCCCTGTAA
TATTGATGTATATAGTTGGGACGATCAATACAGACCCTGGAGAAAAGAAA
GTGGAAGATCCCACAATTGTCTTTGGTAGCCGACATTCGTCTCTTGACAG
ATTTATCGCCAGTGTAGATCCCTGACTGCGGGAGATCGCTAGGTGGTCAG
TTCGGATCCAACCTTGATCGCATGTTTTTTTGCTGTTTTTTTGTGTTCTT
TTTGCAAGATTAATCAATTAAGGCCGCAAAAAAGGTGGGTATCTGGCGGC
CAAAACTTGCCTTAACCCTGTCAGAACGCAGCAGCCCTCTGAAATCTGCT
CTCTAATACCATACTATCTGTTTTTGGGACATGTTTTTCTGCCATAACAG
AAAATTCGTAATATCAGACCTCGGGACGCCAACCCTCGCAGATCTGTTTC
GGGGCAGTCAGATCTGCTTTAGAAATTCTTCTGGAACGCTCGAAAAATCT
GCCGTTTTTAAGCGCTAATCGGATGTATGTTACGCATATTTCAAAGATGT
TTCGATAAGTATCGTGTTCCGAAGGGGTTTGCAGTTGTGGAGAGACGGTG
AGGAGGTGGTTTGCCCACCGACACGCGATACGTCAGAAGATGCAAAATCG
TAAGCATGGTGTCAGTTTTTCTCGTTACTGCCTCGTCCCATCGTCATCTT
TTACCCCTGCACCCTCGCTACTGTCATGTGGCGACTACTGCATGTCTCTC
TCTCCGTCATTGGTATTTGTAGGTAGCCTCGGGGGTGGCTGGAGCAAAGG
CCGAAGTCAAGAGCTTAGTCTCTGACGGCGCCGTGACCGTGACCGGGCCC
GAAGGGTCGTTGTTGCCTCCGTCTGGCGTGGAGATGGGTGATAGCATGGT
GGCCCCGGCGATGGTTGTGGCGGGCGTTGGTGCTGTTGCTGCGGGTGGTG
ATGCTGGTGGGGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig4991:1543..7706+

>mRNA_H-paniculata_contig4991.12205.1 ID=mRNA_H-paniculata_contig4991.12205.1|Name=mRNA_H-paniculata_contig4991.12205.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2352bp|location=Sequence derived from alignment at H-paniculata_contig4991:1543..7706+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTATTTTAAATCCTTCGGGACGCGGTCCTTCTGGAAGCATCGTGGA
GGATTTACAACCGATTCGTGTTGAAAATCTCAGCATTTCTGGAGCGTTTC
AACGTGTTTTCGCACCGTGGCAGGTCGAGAACATATTCACATCCAGGGCG
TCGTCGGGTGTGCTTACGAAAGATTTGCTGGACATTCAGCGCAGGGAGCA
AGAATTGGGCATGGAGGTCCAAGCTGTTGATGACAACATTTTTCACTGGA
AGATGGCTATTTTAAATCCTTCGGGACGCGGTCCTTCTGGAAGCATCGTG
GAGGATTTACAACCGATTCGTGTTGAAAATCTCAGCATTTCTGGAGCGTT
TCAACGTGTTTTCGCACCGTGGCAGGTCGAGAACATATTCACATCCAGGG
CGTCGTCGGGTGTGCTTACGAAAGATTTGCTGGACATTCAGCGCAGGGAG
CAAGAATTGGGCATGGAGGTCCAAGCTGTTGATGACAACATTTTTCACTG
GAAGGTGAAAATCAACCGTGTCAGTGAATCGAGCCCACTGTGCGATGACC
TTCGGCAGCTAAGATCGAAGTTCGCCTACGGATATGTGGAGATGGAGCTG
ACCTTCACCATGGACCTGTATCCGTTCTACCCGCCGCTCGTAAAGCTGGT
GAAAATCAACCGTGTCAGTGAATCGAGCCCACTGTGCGATGACCTTCGGC
AGCTAAGATCGAAGTTCGCCTACGGATATGTGGAGATGGAGCTGACCTTC
ACCATGGACCTGTATCCGTTCTACCCGCCGCTCGTAAAGCTGGTGAGGCC
TCGTTTTCAGGGCTTTATGATGGGCCGCATCACGAGCCTGGAGATGCTAC
AACTGTCGAAATGGTCGAGCGTACGCGGAATGAAGAGCGTTTTGCTTGGC
GTAAGGACCGCACTGGAGACGTGGGGACGCCTTGACTTGAACAGGTGAGG
CCTCGTTTTCAGGGCTTTATGATGGGCCGCATCACGAGCCTGGAGATGCT
ACAACTGTCGAAATGGTCGAGCGTACGCGGAATGAAGAGCGTTTTGCTTG
GCGTAAGGACCGCACTGGAGACGTGGGGACGCCTTGACTTGAACAGTGAG
CTTAACGACGTCATCGTCCATCCGGAAGGGTCCTACACTGAGCTTGAGCA
TTTGCTCATGCGCCTCGGCCTGGTGACGGAGATACGGCCCCACGCCACGG
CAGAGTACGACGAGAAGGCGCTCTGGAAGGCGGTGGGTAAGGAAGAAGAA
GCTCAAGACAAAGCCCGTAGTGAGCTTAACGACGTCATCGTCCATCCGGA
AGGGTCCTACACTGAGCTTGAGCATTTGCTCATGCGCCTCGGCCTGGTGA
CGGAGATACGGCCCCACGCCACGGCAGAGTACGACGAGAAGGCGCTCTGG
AAGGCGGTGGGTAAGGAAGAAGAAGCTCAAGACAAAGCCCGTAGGCATTG
GGGACAGGAGAAGGCCTCGGAATCGGCCGAACGCAAGCGTAAGCGCCCCG
CTGTGGCCGCGACTGGCCTAGGCGCTACCACCGATGACGATGACAACAAT
GACGACATGGACCAAAACGCCTCTGGTACAGATAGCGGGGGAGGGGGAGT
AAGCGGGATGGGGGCCTGGATGGGATCAGGCGTGGGGTCGGGTGCGGGTG
GGCCGGTTCCCATGACGAAAGCGCAGGTTACAGCCGCTACTAGCCAGGCA
AAGAAGGCATTGGGGACAGGAGAAGGCCTCGGAATCGGCCGAACGCAAGC
GTAAGCGCCCCGCTGTGGCCGCGACTGGCCTAGGCGCTACCACCGATGAC
GATGACAACAATGACGACATGGACCAAAACGCCTCTGGTACAGATAGCGG
GGGAGGGGGAGTAAGCGGGATGGGGGCCTGGATGGGATCAGGCGTGGGGT
CGGGTGCGGGTGGGCCGGTTCCCATGACGAAAGCGCAGGTTACAGCCGCT
ACTAGCCAGGCAAAGAAGGTAGCCTCGGGGGTGGCTGGAGCAAAGGCCGA
AGTCAAGAGCTTAGTCTCTGACGGCGCCGTGACCGTGACCGGGCCCGAAG
GGTCGTTGTTGCCTCCGTCTGGCGTGGAGATGGGTGATAGCATGGTGGCC
CCGGCGATGGTTGTGGCGGGCGTTGGTGCTGTTGCTGCGGGTGGTGATGC
TGGTGGGGGCGTAGCCTCGGGGGTGGCTGGAGCAAAGGCCGAAGTCAAGA
GCTTAGTCTCTGACGGCGCCGTGACCGTGACCGGGCCCGAAGGGTCGTTG
TTGCCTCCGTCTGGCGTGGAGATGGGTGATAGCATGGTGGCCCCGGCGAT
GGTTGTGGCGGGCGTTGGTGCTGTTGCTGCGGGTGGTGATGCTGGTGGGG
GC
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