prot_H-paniculata_contig4990.12203.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4990.12203.1
Unique Nameprot_H-paniculata_contig4990.12203.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length447
Homology
BLAST of mRNA_H-paniculata_contig4990.12203.1 vs. uniprot
Match: D7FSU1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSU1_ECTSI)

HSP 1 Score: 542 bits (1397), Expect = 1.420e-188
Identity = 280/415 (67.47%), Postives = 337/415 (81.20%), Query Frame = 0
Query:    6 SDTGSNSNSRGVESLSRDSRRGRDVKSAEVDLMGYQPLPGSVKLSHITEQVLRKAPFAVGSNKAMWRAFLTSRPYRELTTDGFWFVVAHELLGIPVDAEKSPRFSRMAHVYCHMFAHAPAVFKDVWGSYFFEAWALTLLLLLQEAFPKSKPTFSDPAFRMRLLDICAEWSLGVRPSFPLSGHWVLKFDKRPPTELELLKRRTFGAGLSGSVSTSAISPNGEGGGRTKA---AALTRRREKIPDHRLNYVPSRSVIEFGNSPLVTQHLKMLTSGGNPSVAPIRLQVTGEATRTLRPFQESYMQLRKSDKTARTNAWRAAQAVRFHSERAATVDVLSRVDRRREDLLRQHANSRTEARREISRLRADAKEDRISIATEASNLLSKGDVHQFSNFLVEDLSKA---TSRSAFTSGTTG 414
            S++GSNSNSR VE+LSRDSR GRDVKSAE+DL+ YQPLPGSV+L+ +TE+VLR+APFAVG +K MWR FLTSRP+ EL  DGFWFVVAHE+L +PVDA  SPRFSRMAHVY HMF +AP VFKD+WGSYFFEAWALTL++LLQE+FPKSK    +P+FRMRLLD+CAEW++G+RPSFPL+GHWVLKFDKRPPTELELLKRRTFGAGLSG+ S  A+ P G+    ++A       RRR  IP+HRLNYV +RS I+FGNSP V  HL++LT GG  SV PIRLQVTGEATRTLRPFQE  ++L  +D+  R+N WRAAQAVR  +ER ATVD+L+R+D+RRE L+RQH +S+ E R+EISR+R DA EDR SI TEA++LLSKGDVH+FSNFLV+  +K      R    SG+ G
Sbjct:   51 SESGSNSNSR-VETLSRDSRHGRDVKSAEIDLVRYQPLPGSVRLASVTEKVLREAPFAVGISKPMWRVFLTSRPFMELAADGFWFVVAHEILRMPVDAAHSPRFSRMAHVYSHMFTNAPPVFKDMWGSYFFEAWALTLIILLQESFPKSKSLVDEPSFRMRLLDLCAEWTMGIRPSFPLAGHWVLKFDKRPPTELELLKRRTFGAGLSGTSSMPAL-PQGDASKDSRANDTVPTARRRGGIPEHRLNYVATRSAIDFGNSPFVKHHLRVLTGGGKTSVTPIRLQVTGEATRTLRPFQEQSLRL-ANDRLLRSNTWRAAQAVRVRNERPATVDILTRIDQRREKLMRQHISSKRETRQEISRMRIDAAEDRSSIETEAADLLSKGDVHEFSNFLVKHQAKKYRKAERKLLGSGSMG 462          
BLAST of mRNA_H-paniculata_contig4990.12203.1 vs. uniprot
Match: F0YMC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMC1_AURAN)

HSP 1 Score: 105 bits (262), Expect = 5.220e-21
Identity = 64/196 (32.65%), Postives = 98/196 (50.00%), Query Frame = 0
Query:   18 ESLSRDSRRGRDVKSAEVDLMGY-QPLPGSVKLSHITEQVLRKAPFAVGSNKAMWRAFLTSRPYRELTTDGFWFVVAHEL--------LGIPVD----------AEKSPRFSRMAHVYCHMFAHAPAVFKDVWGSYFFEAWALTLLLLLQEAFPKSKPTF-SDPAFRMRLLDICAEWSLGVRPSFPLSGHWVLKFD 193
            E L   + R  D+K       G+ +PLP SV L  I + VLR+APF  G     WR+ + S+ ++ L+ D FW+  A+ +        +G   D           E+   FS MA  Y H+F       KD   + F+E  A T+LL+L  A+P+ +  F  D A +  L+D+CAEW++G++P      HW++K D
Sbjct:   21 ELLPSKTARSDDIKGFGRSGAGFGRPLPRSVHLPFIIDAVLREAPFVTGKRMQTWRSIIQSQDFQNLSVDSFWWFHANVIEPRDRGVDIGESTDIDEQLHGRNFTEEDALFSNMAFSYVHIFRKVQTQHKDSVINKFYEVMAYTILLILGAAYPRRRDHFLEDQALKRHLVDLCAEWTMGIQPRGLDGTHWIIKGD 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4990.12203.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FSU1_ECTSI1.420e-18867.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0YMC1_AURAN5.220e-2132.65Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 347..367
IPR029417FAM227 ProteinPFAMPF14922FWWhcoord: 40..188
e-value: 2.5E-31
score: 108.6
IPR029417FAM227 ProteinPANTHERPTHR33560FAMILY NOT NAMEDcoord: 40..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4990contigH-paniculata_contig4990:3857..10557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4990.12203.1mRNA_H-paniculata_contig4990.12203.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4990 3839..10575 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4990.12203.1 ID=prot_H-paniculata_contig4990.12203.1|Name=mRNA_H-paniculata_contig4990.12203.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=447bp
MGASLSDTGSNSNSRGVESLSRDSRRGRDVKSAEVDLMGYQPLPGSVKLS
HITEQVLRKAPFAVGSNKAMWRAFLTSRPYRELTTDGFWFVVAHELLGIP
VDAEKSPRFSRMAHVYCHMFAHAPAVFKDVWGSYFFEAWALTLLLLLQEA
FPKSKPTFSDPAFRMRLLDICAEWSLGVRPSFPLSGHWVLKFDKRPPTEL
ELLKRRTFGAGLSGSVSTSAISPNGEGGGRTKAAALTRRREKIPDHRLNY
VPSRSVIEFGNSPLVTQHLKMLTSGGNPSVAPIRLQVTGEATRTLRPFQE
SYMQLRKSDKTARTNAWRAAQAVRFHSERAATVDVLSRVDRRREDLLRQH
ANSRTEARREISRLRADAKEDRISIATEASNLLSKGDVHQFSNFLVEDLS
KATSRSAFTSGTTGGRRRRRRPPAIASSSSSPLPVGGGGDSGGAGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029417FAM227