prot_H-paniculata_contig4987.12197.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4987.12197.1
Unique Nameprot_H-paniculata_contig4987.12197.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length117
Homology
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 1.040e-32
Identity = 58/85 (68.24%), Postives = 73/85 (85.88%), Query Frame = 0
Query:    1 MKSWFPNIVMAMTKAPSKTAVVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVT 85
            ++SWFPN+VMAM   PS++    QA F++ PKMTKWEV+EYLTKIY+VPVKKVMTQNF+GKRKR++GKR I+ YKR +FK+AIVT
Sbjct:    3 IRSWFPNMVMAMISGPSRSRPA-QASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVT 86          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 104 bits (260), Expect = 6.220e-27
Identity = 56/92 (60.87%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    1 MKSWFPNIVMAMTKAPSKTAVVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLDAGKLS 92
            +K WFP+  M +   P++    +QA FRV PKMTK EV+EYL K+Y VPVKKVMTQNF GKRKR+ G R II+YKR  FK+AIVTLD  K+S
Sbjct:    3 VKEWFPSFFMQLVTMPTRGRP-QQAAFRVSPKMTKLEVKEYLLKVYGVPVKKVMTQNFLGKRKRIQGSRSIISYKRPDFKKAIVTLDLEKMS 93          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A7S3QJC9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJC9_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 2.260e-20
Identity = 50/93 (53.76%), Postives = 63/93 (67.74%), Query Frame = 0
Query:    4 WFPN--IVMAMTKAPSKTAVVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLDAGKLSIE 94
            W PN  I++   K  +KTA    A FRV PKMTK E++EYLTKIY++PVKKV T NF GKRKR +G++KI+ YK   FK+A VT D     +E
Sbjct:   13 WMPNMPILLDGAKNATKTAPAT-ATFRVKPKMTKHEIKEYLTKIYNLPVKKVNTANFAGKRKRAMGRQKIVEYKYKDFKKAFVTFDDSLKEVE 104          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A6U3SB59_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB59_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.250e-19
Identity = 47/86 (54.65%), Postives = 62/86 (72.09%), Query Frame = 0
Query:    1 MKSWFPNIVMAMTKAPSKTAV-VKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVT 85
            ++ W PN+ + +  A + T      A FRV PKMTK EV+E+LTKIY++PV KV TQN+ GKRKR++GKR+I  YK A FK+AIVT
Sbjct:   11 LRVWMPNMPIVLLSARNATETSAATATFRVLPKMTKHEVKEHLTKIYNLPVAKVNTQNYLGKRKRVVGKRRIAYYKNADFKKAIVT 96          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A7S4IBC0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IBC0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 4.780e-19
Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 KSWFPNIVMAMTKAPSKT-AVVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLD 87
            + W P + + + KA S   +    A+FRV PKMTK E++EYLTKIY++PVKKV T N+ GKRKR++GKR I  YK   FK+AIV  D
Sbjct:   11 RMWMPTMPITLVKARSANESQSAMAVFRVMPKMTKHEIKEYLTKIYNLPVKKVNTMNYLGKRKRVIGKRGIAYYKYRDFKKAIVKFD 97          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: B7FPJ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPJ8_PHATC)

HSP 1 Score: 84.3 bits (207), Expect = 1.750e-18
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 0
Query:    2 KSWFPNIVMAMTKAPSKTAVVKQ-AIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLD 87
            + W P++ + M  A S TA     AIFR  P+MTK E++EYLTKIYD+PVKKV T N++GKRKRL+    I  +K  +FK+A+VT D
Sbjct:   16 RMWMPSMPLTMVSARSATANGPAFAIFRTVPRMTKHEIKEYLTKIYDLPVKKVNTMNYEGKRKRLISNSGIAYFKYKNFKKAVVTFD 102          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A4D9DHX4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DHX4_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 2.440e-18
Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0
Query:   10 MAMTKAPSKTAVVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTL 86
            MA+ +AP++ A   QA+FRV P M K E+REYLTKIY + V+KVMT N  G+RKR++G R+I+ YKR  FK+A VTL
Sbjct:    1 MALIRAPTQ-ATPYQAVFRVSPSMNKPEIREYLTKIYGLNVRKVMTANMAGRRKRIMGSRRILRYKRPDFKKAYVTL 76          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A448YYR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYR3_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.870e-18
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 0
Query:    2 KSWFPNIVMAMTKAPSKTA-VVKQAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLD 87
            + W PN+ M +  A + TA    +A FRV P+MTK E++EYLTKIY +PV+KV T N+ GKRK + G R++I YK A FK+A+V+ D
Sbjct:   10 RMWMPNMPMMLVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVQKVNTANYLGKRKLVRGSRQVIRYKYADFKKAVVSFD 96          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A7S2AAI8_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAI8_TRICV)

HSP 1 Score: 82.4 bits (202), Expect = 5.610e-18
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    1 MKSWFPNIVMAMTKAPSKTAVVK-QAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLDAGKLSIEGGSGSSATSEYQD 107
            +K + P + M +  A + T      A+FRV P+MTK E++EYL+KIY +PVKKV T N+ GKRKR+ G+RKI  YK   FK+AIV  D     +  G G+   SE Q+
Sbjct:    9 LKVFLPTMPMTLVSARNPTLTKNASAVFRVEPRMTKHEIQEYLSKIYQLPVKKVNTMNYMGKRKRVFGRRKIAYYKYRDFKKAIVIFDDSLRDV--GLGTRIISEEQE 114          
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Match: A0A7S0ABN5_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ABN5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 6.070e-18
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 0
Query:    2 KSWFPNIVMAMTKAPSKTAVVK-QAIFRVPPKMTKWEVREYLTKIYDVPVKKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLD 87
            + W P + + +  A + T     QA FRV P+MTK E++E+L KIYD+PVKKV T N+ GKRKR+ G+RK+  YK   FK+AIVT D
Sbjct:   11 RQWMPTMPIVLVDAVNATERANAQATFRVLPRMTKHEIKEHLQKIYDLPVKKVHTMNYLGKRKRVYGERKVAYYKYRDFKKAIVTFD 97          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4987.12197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL11_ECTSI1.040e-3268.24Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YVT8_9STRA6.220e-2760.87Ribosomal protein L23/L15e core domain-containing ... [more]
A0A7S3QJC9_9STRA2.260e-2053.76Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A6U3SB59_9STRA1.250e-1954.65Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S4IBC0_9STRA4.780e-1952.87Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
B7FPJ8_PHATC1.750e-1851.72Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A4D9DHX4_9STRA2.440e-1857.14Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A448YYR3_9STRA2.870e-1850.57Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S2AAI8_TRICV5.610e-1845.37Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S0ABN5_9STRA6.070e-1850.57Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..111
e-value: 3.3E-23
score: 84.4
IPR013025Ribosomal protein L25/L23PFAMPF00276Ribosomal_L23coord: 21..89
e-value: 3.0E-16
score: 59.5
NoneNo IPR availablePANTHERPTHR12059RIBOSOMAL PROTEIN L23-RELATEDcoord: 3..88
NoneNo IPR availablePANTHERPTHR12059:SF539S RIBOSOMAL PROTEIN L23, MITOCHONDRIALcoord: 3..88
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 6..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4987contigH-paniculata_contig4987:11351..13870 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4987.12197.1mRNA_H-paniculata_contig4987.12197.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4987 10504..14010 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4987.12197.1 ID=prot_H-paniculata_contig4987.12197.1|Name=mRNA_H-paniculata_contig4987.12197.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bp
MKSWFPNIVMAMTKAPSKTAVVKQAIFRVPPKMTKWEVREYLTKIYDVPV
KKVMTQNFDGKRKRLLGKRKIINYKRASFKRAIVTLDAGKLSIEGGSGSS
ATSEYQDMKQLPSSSA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR013025Ribosomal_L25/23
IPR012678Ribosomal_L23/L15e_core_dom_sf