mRNA_H-paniculata_contig4987.12196.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4987.12196.1
Unique NamemRNA_H-paniculata_contig4987.12196.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: D7FL07_ECTSI (DUF2012 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL07_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 1.970e-83
Identity = 128/164 (78.05%), Postives = 141/164 (85.98%), Query Frame = 3 
Query:  105 MPDTFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQTGIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQKAVA-GAANMSFSDMLSNALAG 593
            MPD  VVPTTKVVLNGGQH++ TARDGSFAFRDV  GVYLLEVLS  FH+S +KIKVDD TGIIAIEYKYPGA RKE +HPL L AH KW+HFEK+EGMK+GGMFKSPMTIIM+LS  +MF LPKMMANLDPEQLEEI+ QQKAV    AN+SFS +LSNALAG
Sbjct:    1 MPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVAAGVYLLEVLSPNFHFSAMKIKVDDMTGIIAIEYKYPGAPRKEAIHPLLLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAG 164
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A7S0CGJ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGJ2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.260e-36
Identity = 68/148 (45.95%), Postives = 101/148 (68.24%), Query Frame = 3 
Query:  141 VLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKV------DDQTGIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQKAVAGAANMSFS 566
            +LN G+++ +T RDG+F   +V+PGV+LL+V S T  +S VKI++      DD+ G+  IEY YPGA+++ + HPL L AHA++ +FE ++G  IG +FK+PM I+M+ S GLMF +PKMM NLD EQ E++Q Q +  +    M  S
Sbjct:    1 MLNDGEYSTYTQRDGAFVLYNVLPGVHLLDVQSHTHLFSQVKIQLLEATETDDEMGLKCIEYAYPGASKQAIPHPLILTAHAQYQYFEPRQGFSIGTIFKNPMLIMMLFSVGLMFFMPKMMENLDDEQKEQMQKQMELQSDPTKMLSS 148
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A836CIT1_9STRA (DUF2012 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT1_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.450e-36
Identity = 72/171 (42.11%), Postives = 114/171 (66.67%), Query Frame = 3 
Query:   36 MLLGFFFVMCSGVGAEEIRGTLAMPD-TFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQT---GIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKI-GGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQK 533
            +LL  F  +C+ V    I+G L++P+    + TT++ LNGG+ + ++   G+F F  V PGVY+L+V ST++H+S +KIKV ++    GI A+E+ YPGA +K+  HPL L AHA++++FE +E   +   M ++PM IIM L+ G M L+PK+M  +DPE L++ Q +QK
Sbjct:   14 LLLAAFIHVCAAV---SIQGKLSLPEGAGPLETTRLTLNGGERSTYSQASGAFVFHGVGPGVYVLDVQSTSYHFSQMKIKVPEEGEGGGIQALEFVYPGAPKKDAPHPLALAAHAQYAYFEPREAFNVLTAMRRNPMLIIMALAMGAMALMPKLMEGMDPELLKQAQAEQK 181
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BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A7S2P968_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P968_9STRA)

HSP 1 Score: 134 bits (338), Expect = 2.240e-35
Identity = 75/191 (39.27%), Postives = 114/191 (59.69%), Query Frame = 3 
Query:   30 LAMLLGFFFVMCSGVGAEEIRGTLAMPDTFV-VPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKV--DDQTGIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQKAVAGAANMSFSDMLSNALAG 593
            L+++LG      S      I+G L +PD+   + +T++ LN G  T +T  +G F F  V PGV+LL+V S   H+S VKI++  D       IEY YPGA ++ + HPL L AHA + ++EK++G  I  +FK+PM ++M+ + G++FL+PKMM ++DPEQ E +Q Q +          S MLS+ L G
Sbjct:   15 LSLILGCISASSSSPPTASIQGRLRLPDSAASLNSTRITLNDGSFTTYTQPNGDFIFHRVPPGVHLLDVQSRQHHFSQVKIQLLEDAMDSPKCIEYVYPGAPKQAMPHPLELTAHASYEYYEKRQGFSIFSIFKNPMILMMLFTGGMLFLMPKMMEDMDPEQKEMMQKQMEF-----QQDPSKMLSSMLKG 200
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A7S2CRA1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CRA1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.080e-34
Identity = 66/149 (44.30%), Postives = 97/149 (65.10%), Query Frame = 3 
Query:   87 IRGTLAMPDTFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKV--DDQTGIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQ 527
            + G L  PD    PTTK+ LN G++  F+  DGSF F DV PGVYLL+VLSTT  +S VK+ +  D +  +  +EY+YPGA ++ + +PL L+AH K  +FE +E   I  + K+PM+ + I S   + + PKMM ++DPEQ++E+Q Q
Sbjct:   33 VEGRLLFPDKSTPPTTKLTLNAGEYETFSRFDGSFTFHDVKPGVYLLDVLSTTVMFSQVKLNLPNDPEGKVRCLEYRYPGAMKQPISYPLDLMAHVKIKYFEVRESFGIHTILKNPMSYMAIFSLFFIIVFPKMMNSMDPEQMKEMQDQ 181
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A6V2I1F6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I1F6_9STRA)

HSP 1 Score: 132 bits (331), Expect = 2.230e-34
Identity = 68/172 (39.53%), Postives = 106/172 (61.63%), Query Frame = 3 
Query:   87 IRGTLAMPDTFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQT--GIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQKAVAGAANMSFSDMLSNALAGP 596
            I+G L +PD   + TT++ LN G+ T +T  DG+F F  V PGV+LL+V S  +H+S VK+++ +++      IEY +PGA +    +P+ L AHAK+ +FEK++G     + K+PM ++MI S GLMF++P MM NLDPE  E +Q Q +  +    M  S+++      P
Sbjct:   30 IQGQLLLPDGSDLNTTRITLNDGEQTTYTRPDGTFTFYHVPPGVHLLDVQSQFYHFSQVKVQLLEESMDAPKCIEYAFPGAPKTVAPYPILLTAHAKYEYFEKQQGFAFSSILKNPMMLMMIFSVGLMFVMPMMMDNLDPEDKERMQKQMEMQSDPQKM-LSELMGGLTGAP 200
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: F0Y411_AURAN (DUF2012 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y411_AURAN)

HSP 1 Score: 126 bits (316), Expect = 4.260e-33
Identity = 60/137 (43.80%), Postives = 96/137 (70.07%), Query Frame = 3 
Query:  123 VPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQTG--IIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQ 527
            +PTT+VVLNGG++  +T  DG F F DV PGVYLL+VLS  + +S VK+ +    G  I  +EY+YPGAA++ + +PL L AH K  +FE +E   +  +F++PM ++++ +  ++ L+PKMM N+DPE+++++Q Q
Sbjct:    3 LPTTEVVLNGGEYRTYTRPDGGFVFHDVEPGVYLLDVLSVDYIFSQVKLNLPKAGGEAIRCLEYRYPGAAKQPMAYPLELAAHVKQQYFEVRETPGLHTLFRNPMMLMLLFTGAVVVLMPKMMDNMDPEEMKKMQEQ 139
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A6H5JWY4_9PHAE (DUF2012 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY4_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 1.060e-32
Identity = 64/93 (68.82%), Postives = 72/93 (77.42%), Query Frame = 3 
Query:   18 WAGWLAMLLGFFFVMC-SGVGAEEIRGTLAMPDTFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQTGI 293
            W   + ++LG  + MC S   AEEI GTLAMPD  VVPTTKVVLNGGQH++ TARDGSFAFRDV  GVYLLEVLS  FH+S +KIKVDD TGI
Sbjct:    7 WKRLVTVVLGLAWSMCWSLCAAEEILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVAAGVYLLEVLSPNFHFSAMKIKVDDMTGI 99
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: B8C2T8_THAPS (DUF2012 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2T8_THAPS)

HSP 1 Score: 127 bits (319), Expect = 1.970e-32
Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 3 
Query:   87 IRGTLAMPDT-FVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQT--GIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQK 533
            I+G L +PD    + +T++ LN G +T +T  DGSF F  V PGV+LL+V     H+S VKI++ ++       IEY YPGA ++ + +PL L AHA + +FE ++G  I  +FK+PM ++M+   G+MF++PKMM  LDPEQ E++Q Q +
Sbjct:   34 IQGKLRLPDPKLTLNSTRITLNDGSYTTYTQPDGSFIFHRVPPGVHLLDVQCRQHHFSQVKIQLLEEAMDSPKCIEYIYPGAPKQAIPYPLELTAHASYEYFEPRKGFSIFRIFKNPMLLMMVFMGGMMFMMPKMMEGLDPEQKEQMQRQME 185
[Close]
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Match: A0A7S2SSA1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSA1_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.580e-31
Identity = 76/206 (36.89%), Postives = 115/206 (55.83%), Query Frame = 3 
Query:    6 ATRRWAGWLAMLLGFFFVM----CSGVGAEE--------IRGTLAMPDTFVVPTTKVVLNGGQHTAFTARDGSFAFRDVMPGVYLLEVLSTTFHYSTVKIKV--DDQTGIIAIEYKYPGAARKEVVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMMANLDPEQLEEIQGQQKAVAGAANMSFSDMLSN 581
            A R   GW  +  GF  V+    C+   A+         + G L  PD  V   T+V LNGG+    +  DGSF F  V PG+YLL+VLS    +S VKI +  D    I  +EY++PGA ++ + +PL L AHAK  +FE++E + I    ++PM+ +++    ++ + PKM+ N+DPEQL+E+Q  Q  +AGA +    +ML N
Sbjct:   12 ARRAAMGWGRVCEGFLVVLAATLCTVTAADTHNPATSFPVEGRLFFPDHTVPHATRVTLNGGEFETLSLVDGSFVFHHVPPGIYLLDVLSGAALFSQVKINLPSDPDGKIKCLEYRFPGAQKQPMSYPLDLQAHAKLKYFEEREKIGIHTFLRNPMSYMVLFGLFVIVVFPKMIGNMDPEQLKEMQEMQSQMAGAQDPM--EMLKN 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4987.12196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL07_ECTSI1.970e-8378.05DUF2012 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S0CGJ2_9STRA2.260e-3645.95Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A836CIT1_9STRA3.450e-3642.11DUF2012 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S2P968_9STRA2.240e-3539.27Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S2CRA1_9STRA1.080e-3444.30Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6V2I1F6_9STRA2.230e-3439.53Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
F0Y411_AURAN4.260e-3343.80DUF2012 domain-containing protein (Fragment) n=1 T... [more]
A0A6H5JWY4_9PHAE1.060e-3268.82DUF2012 domain-containing protein n=1 Tax=Ectocarp... [more]
B8C2T8_THAPS1.970e-3242.76DUF2012 domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S2SSA1_9STRA1.580e-3136.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4987contigH-paniculata_contig4987:6766..10369 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score259.2
Seed ortholog evalue1.7e-66
Seed eggNOG ortholog2880.D7FL07
Preferred nameEMC7
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003779,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0008092,GO:0012505,GO:0016020,GO:0016021,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032991,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0072546,GO:0098796,GO:0098827
EggNOG free text desc.carbohydrate binding
EggNOG OGsKOG3306@1,KOG3306@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size737
Cds size672
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4987.12196.1prot_H-paniculata_contig4987.12196.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4987 6801..10339 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930467.573734-UTR-H-paniculata_contig4987:6765..68001622930467.573734-UTR-H-paniculata_contig4987:6765..6800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4987 6766..6800 +
1691481304.75833-UTR-H-paniculata_contig4987:6765..68001691481304.75833-UTR-H-paniculata_contig4987:6765..6800Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4987 6766..6800 +
1622930467.695416-UTR-H-paniculata_contig4987:10339..103691622930467.695416-UTR-H-paniculata_contig4987:10339..10369Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4987 10340..10369 +
1691481304.8354154-UTR-H-paniculata_contig4987:10339..103691691481304.8354154-UTR-H-paniculata_contig4987:10339..10369Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4987 10340..10369 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930467.5871637-CDS-H-paniculata_contig4987:6800..68261622930467.5871637-CDS-H-paniculata_contig4987:6800..6826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 6801..6826 +
1691481304.774681-CDS-H-paniculata_contig4987:6800..68261691481304.774681-CDS-H-paniculata_contig4987:6800..6826Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 6801..6826 +
1622930467.6084063-CDS-H-paniculata_contig4987:7548..76241622930467.6084063-CDS-H-paniculata_contig4987:7548..7624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 7549..7624 +
1691481304.788117-CDS-H-paniculata_contig4987:7548..76241691481304.788117-CDS-H-paniculata_contig4987:7548..7624Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 7549..7624 +
1622930467.626639-CDS-H-paniculata_contig4987:8084..82581622930467.626639-CDS-H-paniculata_contig4987:8084..8258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 8085..8258 +
1691481304.8000202-CDS-H-paniculata_contig4987:8084..82581691481304.8000202-CDS-H-paniculata_contig4987:8084..8258Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 8085..8258 +
1622930467.644746-CDS-H-paniculata_contig4987:8826..88881622930467.644746-CDS-H-paniculata_contig4987:8826..8888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 8827..8888 +
1691481304.808152-CDS-H-paniculata_contig4987:8826..88881691481304.808152-CDS-H-paniculata_contig4987:8826..8888Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 8827..8888 +
1622930467.6631553-CDS-H-paniculata_contig4987:9341..94801622930467.6631553-CDS-H-paniculata_contig4987:9341..9480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 9342..9480 +
1691481304.8162544-CDS-H-paniculata_contig4987:9341..94801691481304.8162544-CDS-H-paniculata_contig4987:9341..9480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 9342..9480 +
1622930467.682768-CDS-H-paniculata_contig4987:10144..103391622930467.682768-CDS-H-paniculata_contig4987:10144..10339Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 10145..10339 +
1691481304.8251452-CDS-H-paniculata_contig4987:10144..103391691481304.8251452-CDS-H-paniculata_contig4987:10144..10339Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4987 10145..10339 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4987.12196.1

>prot_H-paniculata_contig4987.12196.1 ID=prot_H-paniculata_contig4987.12196.1|Name=mRNA_H-paniculata_contig4987.12196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
MLLGFFFVMCSGVGAEEIRGTLAMPDTFVVPTTKVVLNGGQHTAFTARDG
SFAFRDVMPGVYLLEVLSTTFHYSTVKIKVDDQTGIIAIEYKYPGAARKE
VVHPLRLVAHAKWSHFEKKEGMKIGGMFKSPMTIIMILSFGLMFLLPKMM
ANLDPEQLEEIQGQQKAVAGAANMSFSDMLSNALAGPPPQQQTAGPGAAQ
SQRGGGSSRGGSGGGHRTKRSKG*
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mRNA from alignment at H-paniculata_contig4987:6766..10369+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4987.12196.1 ID=mRNA_H-paniculata_contig4987.12196.1|Name=mRNA_H-paniculata_contig4987.12196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3604bp|location=Sequence derived from alignment at H-paniculata_contig4987:6766..10369+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATAGCCACGCGAAGATGGGCAGGATGGCTGGCTATGCTATTAGGGTTT
TTTTTCGTAATGTGAGCGATTCGATTAATGTGCCAATTGATCGACGGATG
ATGATATTCCAACTGTTCCCTACCCTACAGAGTACATAAGCAATAGCCCA
CCGCGACCTCACTCTACTGTGGTGTATTCTACAGTCTTGGTGGGGACGTA
TAAATAGTCATGAGCTTATGTAAGCATGTATGAACTACCTGTTGATATGT
GTTTAAGTTCGATCGTATGTCGGCGAGATGCTTCTTATGGGTGCTCTTCT
GGTGTGTAGAGGAAAAGAGTCCGCGATTTCCTGTAGTGGGGAAGTGATCT
GTTGGTTCTATACAAAGATGTAGTCAGGAACGACAGACAGCAGTGTAGGC
AATGGCAGCTTGGAGTCTTGTAATGAAATGGGAACATGCGGCAAAGCTCC
GTTCCTGCTTTGTATTGGCCAAAGGAGATCGTCTTGCAGGAGGTCAATGT
ATGTATAATCCTCATTTTAAGCTTATTACTCGCTTCGTGTGTCTGGTTAT
GGCGGCTCCCGGCGACGCACGACGTGACTACTGGAGGTACACCTTCAGCT
GTCCGCGAGGTAGTGCGTGCTATGACAGGGCAGGACGTGTTCTTGCCGTG
TCGGAAATGCCCACAGATCAAGCATATGACTTTTTACAATGATCAGATAG
TAGCCCTACTTACGGTCCCAAGTGGTGTTGCTATCACATCATTGTACGTT
GTGGATACTCTGCTTGGTGCGACGGTTTTTCAGGTGCTCGGGAGTAGGTG
CTGAGGAGATCAGGGGTACCCTTGCCATGCCCGATACATTCGTCGTGCCC
ACCACCAAGGTCAGCGCAAGAAAAAGATGTTCTGCTCTAGTCTCTTCCTT
CATGCAAGGTTGCGCGTGCGCGTTTACCGTTCGACTCTGAGTTGTGGTCT
CGTTCATCCCCGACTGTCAGTAGAACCAGCACGAGCTTGGTCTACTTGAG
CACATGACTAGATATGCCAGTAGAAACGCGTCGTAGACCACCGCTTTTGC
GTTTATTCTACCGTCTTTGTAAGTATTTACTATTTTTCGGTATCCCCTCG
AAACCTGGAAATGTTGCCAACAAAAGGCCTTCCAGATCATACGGTATCCG
CGCTCTTTCTGAGTCTCGATCATGCTGAGGGTGATGAGTTGCCTGCTCCA
CTCTTCACACATCTGATGAAGAGGGGAATATTACAGCACCTGCTGACCAT
CTGCTTACAGCCAGGTTCTCGACGTATTCGGCCTCGATGCCCCCCCCCCC
CCCCTCGACACTCCGATAGGTGGTGCTGAACGGCGGCCAGCACACCGCCT
TCACGGCTAGGGACGGTTCGTTCGCGTTTCGCGACGTGATGCCCGGAGTA
TACCTGCTAGAGGTGTTATCAACCACTTTCCACTACAGCACCGTGAAGAT
CAAGGTAGACGATCAAACTGGCATCATTGCCATCGAATACAAGGTAAATA
CTGTATTCCCTCACGGCTGTGTTGTTTTTGTTCTGCGAGGAAATATGAGA
CAAGCGCCGCACAGGCTCAGCCTGAGCACGTTCTAGATGTGTATGGCCCG
ACACACCTGTTAGTATGTCATGTCTGTCTCAAGATGACCTACGTGGTATT
GCTGTTGGAAGTAAACCACAGTAGAGTGGGGCAGCAGTTGGGTCACGCTC
GTGCAGCCGCCGCTGTTTGGTCACTGTGCGTAGCCCATAGATGTACAAGC
CCCGTGACGCGCTCAGTGTTGTTTTTGTGCGGAAACCCCAATTTAGAACA
CGTGAGCAGCGCATGAGTAGCTGACCCGAAAAGTACAACCACGAGGACGG
AATCATGAACAGGTACAGTATGGTGAAACCTTCCTTCGGATGTAGTAAAC
ACCTCCCAAGATCCACCACTAGATACCAGAAAGTCGAATTGAGGTACATT
CGGGTGGTACGGGGAATATCTCGGTGCCCCGGACGGGCTTTTGACGCCTG
CGCTTTTGTGTCCTCCGTCTGCCTGTTCCCCTCTTTTTCACGGTATGAAT
TTGTGTTACAGTACCCCGGCGCGGCGCGGAAAGAAGTGGTACATCCCCTG
CGTCTGGTGGCGCACGCCAAGTGGTGGGTTGAGTGGTCGACGTATTCATC
TTCTGCGTCTTGAAAGAATAATGAAAAGAATAACTAACGAAATTGGGAGA
TGTCATATCGAGGGGTGCTGTGCATTCCAAGAACAACGGCTCACATCGTC
GTTCTGAAAGTTTCGGCGCGCGATGCGGTCGCCGTGGGCGAAGCTAGAGC
TTTGCCACTATCTGATTGGGTAGTGATGTGTTAAAGCTCTAAAAGAGCAT
ATACGCACGTCTGAGTTACAGTATTGCTGAACTTGTAGATCATTGGGAAT
CCGAATGCATGATATATGCAGTTTAACCTTGCTTGTGTCATTTTCTTCGT
TTCAGCCGAGAAGGCGTATGCACACGTTTTTCTCACGGCGAGCTGTGCTG
ATGGCAGTTTGTGATGTGGAAATTTATCCATCTCCGTTGTTTGCTCCCTC
GTTTCCTTGTCCATATACCCGAGCAGGAGTCACTTCGAGAAGAAGGAAGG
CATGAAAATAGGAGGGATGTTCAAAAGCCCTATGACCATCATAATGATCC
TCTCGTTCGGACTGATGTTTTTGCTTCCGAAGATGATGGCTAACCTTGAC
CCGGAACAGCTGGAGGTGAGCGACCGGGGTGACCCCTTATATACTGTGCC
GTCGTTGGCATATAGTATATGGTATATCACGTTATACAACACCGATGATG
ACATTTTTCAAACCCGATCTTCTTGAAAACTAATGTGTTGATGGGAAGAT
GCATAGGTGTGCTCTTTAGGCCATGTAAGGTCTTGCTTTTTCCCTCTTCC
AGCTGTGGTGGGCAAAACATTTATTGCTCAGGTGATGATATCCCCTCTAT
CTACGGTACAACTTTGTAACGCCCTTCATCGCCACGGACCTACACCCGAA
CGGGTAGGGTAGCTCGTGAACTGAGCATGACTGGAAGTCTAGTCAGAGGT
CTTTTAGTGGATGCAACCCCCCCACTGCCTACTTAGTTCGACCGAATTGG
GGTGGCGCCTACCCCGCAAAGGAACAAATAACTCTGTCCTGTTGAAGGAA
ATGTAGAAATACCTTGGTAGAAATACTGCGGTATGGAAGCATCGGATAGA
GGTTTTAGCCCTAGCCTTCCCGGGGTTAAAAAAAAAATCCGTCGAACTGT
ACAAGGCGTATCGACACTGTCAATAACGCTCGTTGTCTCCTACAAGCGAA
AACTAATGTAGTAGGCCGAATGATAATCTGAACTTTCTCACTATGTTGAT
TCCTTTGTGACCAAACCGGATATACACAGGAAATACAAGGGCAACAGAAG
GCAGTCGCAGGCGCAGCGAACATGTCCTTTTCGGACATGCTTTCAAACGC
CCTGGCCGGACCTCCGCCGCAGCAGCAGACCGCAGGGCCCGGGGCTGCGC
AAAGCCAGAGGGGAGGAGGGAGTAGCAGGGGGGGTAGCGGCGGGGGACAC
CGCACTAAACGTTCCAAGGGCTGAGCGTTCTGTTGTGAATGGTTACCATT
GCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig4987:6766..10369+

>mRNA_H-paniculata_contig4987.12196.1 ID=mRNA_H-paniculata_contig4987.12196.1|Name=mRNA_H-paniculata_contig4987.12196.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1344bp|location=Sequence derived from alignment at H-paniculata_contig4987:6766..10369+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTATTAGGGTTTTTTTTCGTAATATGCTATTAGGGTTTTTTTTCGTA
ATGTGCTCGGGAGTAGGTGCTGAGGAGATCAGGGGTACCCTTGCCATGCC
CGATACATTCGTCGTGCCCACCACCAAGGTGCTCGGGAGTAGGTGCTGAG
GAGATCAGGGGTACCCTTGCCATGCCCGATACATTCGTCGTGCCCACCAC
CAAGGTGGTGCTGAACGGCGGCCAGCACACCGCCTTCACGGCTAGGGACG
GTTCGTTCGCGTTTCGCGACGTGATGCCCGGAGTATACCTGCTAGAGGTG
TTATCAACCACTTTCCACTACAGCACCGTGAAGATCAAGGTAGACGATCA
AACTGGCATCATTGCCATCGAATACAAGGTGGTGCTGAACGGCGGCCAGC
ACACCGCCTTCACGGCTAGGGACGGTTCGTTCGCGTTTCGCGACGTGATG
CCCGGAGTATACCTGCTAGAGGTGTTATCAACCACTTTCCACTACAGCAC
CGTGAAGATCAAGGTAGACGATCAAACTGGCATCATTGCCATCGAATACA
AGTACCCCGGCGCGGCGCGGAAAGAAGTGGTACATCCCCTGCGTCTGGTG
GCGCACGCCAAGTGTACCCCGGCGCGGCGCGGAAAGAAGTGGTACATCCC
CTGCGTCTGGTGGCGCACGCCAAGTGGAGTCACTTCGAGAAGAAGGAAGG
CATGAAAATAGGAGGGATGTTCAAAAGCCCTATGACCATCATAATGATCC
TCTCGTTCGGACTGATGTTTTTGCTTCCGAAGATGATGGCTAACCTTGAC
CCGGAACAGCTGGAGGAGTCACTTCGAGAAGAAGGAAGGCATGAAAATAG
GAGGGATGTTCAAAAGCCCTATGACCATCATAATGATCCTCTCGTTCGGA
CTGATGTTTTTGCTTCCGAAGATGATGGCTAACCTTGACCCGGAACAGCT
GGAGGAAATACAAGGGCAACAGAAGGCAGTCGCAGGCGCAGCGAACATGT
CCTTTTCGGACATGCTTTCAAACGCCCTGGCCGGACCTCCGCCGCAGCAG
CAGACCGCAGGGCCCGGGGCTGCGCAAAGCCAGAGGGGAGGAGGGAGTAG
CAGGGGGGGTAGCGGCGGGGGACACCGCACTAAACGTTCCAAGGGCTGAG
AAATACAAGGGCAACAGAAGGCAGTCGCAGGCGCAGCGAACATGTCCTTT
TCGGACATGCTTTCAAACGCCCTGGCCGGACCTCCGCCGCAGCAGCAGAC
CGCAGGGCCCGGGGCTGCGCAAAGCCAGAGGGGAGGAGGGAGTAGCAGGG
GGGGTAGCGGCGGGGGACACCGCACTAAACGTTCCAAGGGCTGA
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