prot_H-paniculata_contig49849.12192.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig49849.12192.1
Unique Name	prot_H-paniculata_contig49849.12192.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	118

Homology

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6H5KAI3_9PHAE (Chromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI3_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.120e-20
Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMRLDASTRAALKAKYNIV 116
            V++IV G  +++HV R+R YAD+ L V  D++ VF  +  QGE ++  IL+I  + D  G Y+V V W G   +E +W+P++ I++D PQ+L+++L+KM+L    +  +K +Y IV
Sbjct:   56 VQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 170

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 7.040e-19
Identity = 45/116 (38.79%), Postives = 76/116 (65.52%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMRLDASTRAALKAKYNIV 116
            V++IV G  +++HV R+R YAD+ L V  D++ VF  +  QGE ++  IL+I  + D  G Y+V V W G   +E +W+P++ I++D PQ+L+++L+KM+L    +  +K +Y IV
Sbjct: 1534 VQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEVKDNIKKEYGIV 1648

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6H5JVS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 1.170e-18
Identity = 45/116 (38.79%), Postives = 75/116 (64.66%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMRLDASTRAALKAKYNIV 116
            V++IV G  +++HV R+R YAD+ L V  D++ VF  +  QGE ++  IL+I  + D  G Y+V V W G   +E +W+P++ I++D PQ+L+++L+KM+L    +  +K  Y IV
Sbjct:  311 VQNIVNGQVRDVHVARLRFYADSELNVTSDLKDVFQHSFGQGEHEMESILNIGPAHDGSG-YLVRVRWAGFEEDEDTWQPLSDIYQDAPQFLKQELRKMKLSKEIKDNIKKDYGIV 425

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 8.460e-18
Identity = 44/117 (37.61%), Postives = 78/117 (66.67%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMRLDASTRAALKAKYNIVM 117
            V++IV+G  +++HV R+R YADA+L +  +++ VF  A  QGEF+++ I+D+S + D  G + V VEW+G   EE +WE ++ + +  PQ+++ +L+++ L    RA LK +Y I +
Sbjct: 1613 VQNIVSGEVRDVHVARLRFYADAALEITAELKEVFQHAFTQGEFEMAAIVDMSVAEDGPG-FDVEVEWVGFDKEENTWEELSKMWDAAPQFVKSELRRLGLQKKVRAQLKQQYGIAL 1728

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A2P4XSG7_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG7_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 6.990e-10
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMRLDAST 105
            +E+++TG ++E+H  R++ YAD+SL V +D+    A   H  E  + D L  +    ++ ++ + V W GL   E SWEP AV+ +DVP  ++  +K  R D S+
Sbjct:  363 IENLITGERREVHASRLKFYADSSLEVTEDLLRHVA---HNSEGHVVDSLLAARYNAQEKRHELKVHWRGLAEAEDSWEPAAVLLQDVPVAVKAFVKAHRKDESS 464

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6H5L994_9PHAE (Chromo domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L994_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 3.530e-9
Identity = 31/78 (39.74%), Postives = 49/78 (62.82%), Query Frame = 0

Query:    7 GAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVI 84
            G  +++HV R+R YADA+L +  ++   F  A  QG F+++ I+D+SES D  G + V VEW+G   +E  WE ++ I
Sbjct:    4 GEVRDVHVKRLRFYADAALEITAELNDDFQHAFTQGAFEMAAIVDVSESEDGPG-FDVEVEWVGFDKDENIWEELSKI 80

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A0G4IUJ7_PLABS (Chromo domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUJ7_PLABS)

HSP 1 Score: 58.2 bits (139), Expect = 7.420e-8
Identity = 31/99 (31.31%), Postives = 54/99 (54.55%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKM 99
            +ED++T  + + H  R+R YADA L +  +++        Q  F + D+LD     + + +  + V W G    E +WEP A+I EDVPQ + + ++K+
Sbjct:   75 LEDLLTARRFQAHTQRIRRYADADLNITTEIKQHLERLDQQ--FHVDDLLDCRIDRETQ-ELQIKVAWSGFDPSEATWEPAALIAEDVPQLVEQLIRKL 170

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A225W9T8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W9T8_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.190e-5
Identity = 29/90 (32.22%), Postives = 53/90 (58.89%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQ-ISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVP 89
            +E +VTG   ++H  R++ YADA+L     ++ +      QG    +   ++   +P++ G++ +LV W+GL A E SWEP++ + +DVP
Sbjct:  175 IEHLVTGRVYDVHGSRLKFYADAAL---NTMEELLELVSSQGMLLGVDKFIEHRYNPER-GRWELLVSWLGLQAIEDSWEPLSTLLQDVP 260

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A225VA87_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VA87_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.490e-5
Identity = 29/90 (32.22%), Postives = 53/90 (58.89%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQ-ISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVP 89
            +E +VTG   ++H  R++ YADA+L     ++ +      QG    +   ++   +P++ G++ +LV W+GL A E SWEP++ + +DVP
Sbjct:  531 IEHLVTGRVYDVHGSRLKFYADAAL---NTMEELLELVSSQGMLLGVDKFIEHRYNPER-GRWELLVSWLGLQAIEDSWEPLSTLLQDVP 616

[Close]

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Match: A0A6A3DMZ5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DMZ5_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.730e-5
Identity = 30/89 (33.71%), Postives = 46/89 (51.69%), Query Frame = 0

Query:    1 VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDILDISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVP 89
            +E ++TGA + +H  R++ YAD+SL V +++  +   A       +         P     Y VL  W GL   E SWEP+ ++HEDVP
Sbjct:   45 IEHLLTGAIRTVHASRLKRYADSSLDVNEEI--LEHVANQDVYLTVEAFKHHRTHPTHF--YEVLTGWEGLEDIEDSWEPIKIMHEDVP 129

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig49849.12192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12


Match Name	E-value	Identity	Description
A0A6H5KAI3_9PHAE	1.120e-20	38.79	Chromo domain-containing protein n=1 Tax=Ectocarpu...	[more]
A0A6H5L7F6_9PHAE	7.040e-19	38.79	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JVS6_9PHAE	1.170e-18	38.79	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K5A5_9PHAE	8.460e-18	37.61	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A2P4XSG7_9STRA	6.990e-10	34.29	Uncharacterized protein n=1 Tax=Phytophthora palmi...	[more]
A0A6H5L994_9PHAE	3.530e-9	39.74	Chromo domain-containing protein n=2 Tax=Ectocarpu...	[more]
A0A0G4IUJ7_PLABS	7.420e-8	31.31	Chromo domain-containing protein n=1 Tax=Plasmodio...	[more]
A0A225W9T8_9STRA	1.190e-5	32.22	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
A0A225VA87_9STRA	1.490e-5	32.22	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
A0A6A3DMZ5_9STRA	2.730e-5	33.71	Uncharacterized protein n=4 Tax=Phytophthora fraga...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 43..96 e-value: 0.0043 score: 26.3
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 44..107 score: 10.892
None	No IPR available	GENE3D	2.40.50.40		coord: 29..99 e-value: 9.8E-8 score: 33.7
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 39..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig49849	contig	H-paniculata_contig49849:972..1325 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig49849.12192.1	mRNA_H-paniculata_contig49849.12192.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig49849 972..1325 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig49849.12192.1 ID=prot_H-paniculata_contig49849.12192.1|Name=mRNA_H-paniculata_contig49849.12192.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp
VEDIVTGAKKEIHVVRMRPYADASLVVGKDVQAVFAAAQHQGEFQISDIL
DISESPDKKGKYVVLVEWMGLGAEERSWEPVAVIHEDVPQYLRRKLKKMR
LDASTRAALKAKYNIVM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000953	Chromo/chromo_shadow_dom
IPR016197	Chromo-like_dom_sf