prot_H-paniculata_contig4984.12191.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4984.12191.1
Unique Nameprot_H-paniculata_contig4984.12191.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length212
Homology
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 190 bits (482), Expect = 4.590e-57
Identity = 90/197 (45.69%), Postives = 131/197 (66.50%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLR 200
            +AFPPEFW L+ +S+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++
Sbjct:   57 NAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.190e-56
Identity = 96/208 (46.15%), Postives = 135/208 (64.90%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+  RR I    G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:  147 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 354          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 8.650e-56
Identity = 97/209 (46.41%), Postives = 138/209 (66.03%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLV-LAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD++ L    +T E+++ I  LV EL A
Sbjct:   56 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEA 264          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 1.550e-55
Identity = 95/208 (45.67%), Postives = 133/208 (63.94%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+N  N+  R AI+     + P L   +A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E ++ I  LV EL A
Sbjct:  102 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEA 308          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KDD0_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDD0_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.430e-55
Identity = 95/208 (45.67%), Postives = 135/208 (64.90%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E  A  I  MD+ ERR I   +G+ QGD +GP LF   + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:   13 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAKAAKSVPNLVGYIARCYDEISAKSIYAMDSGERRTIECKSGVQQGDGMGPPLFFFILFPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQVIPDLVDELEA 220          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 5.300e-55
Identity = 97/208 (46.63%), Postives = 137/208 (65.87%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:  446 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 653          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 1.200e-54
Identity = 97/208 (46.63%), Postives = 137/208 (65.87%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:  425 NAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 632          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 2.240e-54
Identity = 96/207 (46.38%), Postives = 135/207 (65.22%), Query Frame = 0
Query:    6 AFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            AFPPEFW L  QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L   ++T E+++    LV EL A
Sbjct:  425 AFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEA 631          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 1.130e-53
Identity = 92/205 (44.88%), Postives = 132/205 (64.39%), Query Frame = 0
Query:    8 PPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 211
            PPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC++AFN+  R  I+     + P +  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A ++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:   52 PPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEA 256          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 1.530e-53
Identity = 94/206 (45.63%), Postives = 136/206 (66.02%), Query Frame = 0
Query:    5 DAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHEL 209
            + FPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VRQ++PKLE    E  Q+GVAV+GG E + + A+   Q G+W+I  DC+NAFN+  R AI+     + P L  ++A+CY E PA  + +MD+ ERR +   +G+ QGD +GP LF + + PI+ + Q ++  LGV   AY+DD+ L + +LTEE ++A+  LV EL
Sbjct:  595 NTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDEL 800          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4Y4_9PHAE4.590e-5745.69Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KR59_9PHAE1.190e-5646.15Reverse transcriptase domain-containing protein (F... [more]
A0A6H5LL14_9PHAE8.650e-5646.41Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KT19_9PHAE1.550e-5545.67Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KDD0_9PHAE3.430e-5545.67Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE5.300e-5546.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE1.200e-5446.63Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KKQ2_9PHAE2.240e-5446.38Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE1.130e-5344.88Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JH58_9PHAE1.530e-5345.63Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 49..196
e-value: 5.3E-13
score: 49.0
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..211
score: 8.999

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4984contigH-paniculata_contig4984:13120..13755 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4984.12191.1mRNA_H-paniculata_contig4984.12191.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4984 12716..13801 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4984.12191.1 ID=prot_H-paniculata_contig4984.12191.1|Name=mRNA_H-paniculata_contig4984.12191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRP
KLEVNLSEWQYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNR
AAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQG
DRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLR
AIHFLVHELHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom