mRNA_H-paniculata_contig4984.12191.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4984.12191.1
Unique NamemRNA_H-paniculata_contig4984.12191.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KR59_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR59_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 3.460e-72
Identity = 131/331 (39.58%), Postives = 194/331 (58.61%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            GV DAARAL  D+ +P N++T+ ++ A        + ++   +A I     E   G        T   P+   ++ +RR++ S +GN    FSHL+ I++   G E F + +   WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+  RR I    G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:   25 GVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEA-IAASRTEEEEGSAPRWRPETEFDPQVLLQVINRRSSNSGAGNDGQRFSHLKSIVNNKIGREEFSNAMSPLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGARRTIECKGGVQQGDGMGPPLFCFILVPIILKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 354          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.790e-70
Identity = 133/331 (40.18%), Postives = 197/331 (59.52%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            GV DAARAL  D+ +P N++T+ ++ A        + ++   +A I     E   G        T   P+   ++ +RR++ S +GN    FSHL+ I++T  G E F + + S WRR ++   AFPPEFW L  QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L   ++T E+++    LV EL A
Sbjct:  302 GVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEA-IAASRTEEEEGSAPRWRPETEFDPQVLLQVVNRRSSNSGAGNDGPRFSHLKSIVNTKIGREEFSNAMSSLWRRLIKDPHAFPPEFWTLLKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEA 631          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 2.920e-70
Identity = 132/330 (40.00%), Postives = 196/330 (59.39%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAE----MPPGGQSTSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            GV DAARAL  D+ +P N++T+ ++ A        + ++   +A       E     P     T   P+   ++ + R++ S +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:  324 GVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEAKAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 653          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 244 bits (624), Expect = 5.100e-69
Identity = 133/331 (40.18%), Postives = 197/331 (59.52%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            GV DAARAL  D+ +P N++T+ ++ A        + ++   +A I     E   G        T   P+   ++ + R++ S +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++ I  LV EL A
Sbjct:  303 GVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEA-IAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEA 632          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.040e-67
Identity = 107/242 (44.21%), Postives = 157/242 (64.88%), Query Frame = 3
Query:  282 RNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLR 1004
            R++ S +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+ +S+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E+++
Sbjct:   12 RSSNSGAGNDGQRFSHLKSIVNTKTGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKRSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENIQ 253          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 4.610e-66
Identity = 115/259 (44.40%), Postives = 167/259 (64.48%), Query Frame = 3
Query:  267 RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLV-LAIGELTEEDLRAIHFLVHELHA 1037
            R+ + R++ S +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD++ L    +T E+++ I  LV EL A
Sbjct:    6 RVINSRSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEA 264          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 5.670e-66
Identity = 112/253 (44.27%), Postives = 159/253 (62.85%), Query Frame = 3
Query:  282 RNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            R++ S +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+N  N+  R AI+     + P L   +A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E ++ I  LV EL A
Sbjct:   57 RSSNSGAGNDGQRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEA 308          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5JH58_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH58_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 5.790e-65
Identity = 129/329 (39.21%), Postives = 191/329 (58.05%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHEL 1031
            GV DAARAL  +  +P N++T+ ++ A      S   ++    A I   + E   G            P+    + + R++ S +GN    FSHL+ I +T  G E F   + S WRR +   + FPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VRQ++PKLE    E  Q+GVAV+GG E + + A+   Q G+W+I  DC+NAFN+  R AI+     + P L  ++A+CY E PA  + +MD+ ERR +   +G+ QGD +GP LF + + PI+ + Q ++  LGV   AY+DD+ L + +LTEE ++A+  LV EL
Sbjct:  473 GVKDAARALLAEPRSPGNDETWERLKAKFPLEDSAAVEQAVADA-IAESITEEENGSAPRWRPEEEFDPQVLIEVINSRSSNSGAGNDGQRFSHLKSITNTKIGREDFCGAMSSLWRRLVNDPNTFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVRQWKPKLEEMFREANQFGVAVAGGVERVAMEAQLVHQTGNWIIQTDCSNAFNTGKRTAIMAQAAKSLPDLVGYIARCYDEIPATAVYEMDSGERRTLECTSGVQQGDGMGPPLFSLILIPIILKLQDKYKPLGVAFKAYMDDITLHLKDLTEESVQAMTDLVDEL 800          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 1.180e-60
Identity = 132/387 (34.11%), Postives = 195/387 (50.39%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQC-ILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGL-------------------------------------------------------GAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLRAIHFLVHELHA 1037
            GV DAARAL  D+ +P N++T+ ++ A        + ++   +A I     E   G        T   P+   ++ + R++ S +GN   CFSHL   I++T  G E F + + S WRR +   +AFPPEFW L+ QS+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVA +G  E + +                                                       G +   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ ERR I   +G+ QGD +GP LFC  + PI+ + +A+++ LGV L AY+DD+ L    +T E ++ I  LV+EL A
Sbjct:  273 GVKDAARALLADQPSPGNDETWARLKAKFPHEDPVQVEQAIAEA-IAASRTEEEEGSAPRWRPETEFDPQVLLQVINSRSSNSGAGNDGQCFSHLNXSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKQSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAAAGVVEQVAMDAQLVHQTGHWVVQTDCSNXFGKRTNSEWRCYDQIPAKAIYAMDSGERPTIECKSGVQQGXQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEA 658          
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Match: A0A6H5KA96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA96_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 2.520e-60
Identity = 116/297 (39.06%), Postives = 174/297 (58.59%), Query Frame = 3
Query:   63 GVSDAARALWLDELAPANEDTFGKVSANLARRMSPRWQRP*QQAGIRLPMAEMPPGGQ-----STSIAPKR**RL*SRRNTLSASGNVSLCFSHLQCILSTSAGNEGFGSVVVSFWRRSMEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRPKLEVNLSEW-QYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNRAAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQGDRLGPALFCMPVRPILRRCQAQFNALG 935
            GV DAARAL  D+ +P N++T+ ++ A   R    + ++   +A I     E   G        T   P+   ++ + R++   +GN    FSHL+ I++T  G E F + + S WRR +   +AFPPEFW L+  S+L  LGEKCRP C+G   R ++AAG VR+++PKLE    E  Q+GVAV+GG E + + A+   Q GHW++  DC+NAFN+  R AI+     + P L  ++A+CY E PA  I  MD+ E R I   +G+ QGD +GP LFC  + PI+ + +A+++ LG
Sbjct:  310 GVKDAARALLADQPSPGNDETWARLKAKFTREDPVQVEQANAEA-IAASRTEEEEGSAPRWRPETEFDPRVLLQVINSRSSNFGAGNDGRRFSHLKSIVNTKIGREEFSNAMSSLWRRLINDPNAFPPEFWTLWKLSSLIALGEKCRPVCIGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGEHRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLG 605          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4984.12191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KR59_9PHAE3.460e-7239.58Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE1.790e-7040.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE2.920e-7040.00Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE5.100e-6940.18Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L4Y4_9PHAE1.040e-6744.21Reverse transcriptase domain-containing protein n=... [more]
A0A6H5LL14_9PHAE4.610e-6644.40Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KT19_9PHAE5.670e-6644.27Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JH58_9PHAE5.790e-6539.21Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE1.180e-6034.11Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KA96_9PHAE2.520e-6039.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4984contigH-paniculata_contig4984:12716..13801 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score82.4
Seed ortholog evalue2.8e-13
Seed eggNOG ortholog400682.PAC_15725343
Hectar predicted targeting categoryother localisation
EggNOG OGs2D43P@1,2STRT@2759,3AAAX@33154
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size1086
Cds size636
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4984.12191.1prot_H-paniculata_contig4984.12191.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4984 13120..13755 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930467.0479176-UTR-H-paniculata_contig4984:12715..131191622930467.0479176-UTR-H-paniculata_contig4984:12715..13119Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4984 12716..13119 +
1691481304.5126195-UTR-H-paniculata_contig4984:12715..131191691481304.5126195-UTR-H-paniculata_contig4984:12715..13119Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4984 12716..13119 +
1622930467.0735815-UTR-H-paniculata_contig4984:13755..138011622930467.0735815-UTR-H-paniculata_contig4984:13755..13801Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4984 13756..13801 +
1691481304.5410998-UTR-H-paniculata_contig4984:13755..138011691481304.5410998-UTR-H-paniculata_contig4984:13755..13801Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4984 13756..13801 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930467.0594203-CDS-H-paniculata_contig4984:13119..137551622930467.0594203-CDS-H-paniculata_contig4984:13119..13755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4984 13120..13755 +
1691481304.5303876-CDS-H-paniculata_contig4984:13119..137551691481304.5303876-CDS-H-paniculata_contig4984:13119..13755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4984 13120..13755 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4984.12191.1

>prot_H-paniculata_contig4984.12191.1 ID=prot_H-paniculata_contig4984.12191.1|Name=mRNA_H-paniculata_contig4984.12191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MEQSDAFPPEFWELFLQSNLTTLGEKCRPTCVGFMVRHILAAGVVRQYRP
KLEVNLSEWQYGVAVSGGAELMGLGAKSHLQLGHWLIALDCTNAFNSVNR
AAILEDVVITTPGLTTFVAKCYGEKPADIISQMDTAERRRISSNTGIHQG
DRLGPALFCMPVRPILRRCQAQFNALGVELLAYLDDLVLAIGELTEEDLR
AIHFLVHELHA*
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mRNA from alignment at H-paniculata_contig4984:12716..13801+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4984.12191.1 ID=mRNA_H-paniculata_contig4984.12191.1|Name=mRNA_H-paniculata_contig4984.12191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1086bp|location=Sequence derived from alignment at H-paniculata_contig4984:12716..13801+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGGGGAGCACATCAACGGCGGACAGATACAGGAAGGCGGCAGCTGCGTG CAGGCACAAAGGGGGGTCTCTGACGCAGCGAGAGCGTTGTGGTTGGATGA ACTCGCGCCTGCCAATGAGGATACCTTCGGCAAAGTCAGCGCGAATTTGG CCAGGAGGATGAGCCCGCGCTGGCAGCGGCCATAGCAGCAAGCCGGAATT CGCCTGCCAATGGCGGAGATGCCGCCTGGAGGCCAGTCGACGAGTATCGC CCCGAAACGCTGATAGCGGTTATGAAGTCGAAGAAACACCCTGTCCGCGT CGGGTAACGTTAGCCTGTGTTTCTCCCATCTGCAGTGCATCCTGAGTACC TCCGCGGGTAATGAAGGTTTTGGCTCTGTTGTCGTGTCTTTCTGGCGGCG CTCCATGGAGCAATCCGACGCCTTCCCGCCGGAGTTCTGGGAGTTGTTCC TCCAAAGCAACCTCACGACGCTCGGGGAGAAGTGCCGCCCGACCTGCGTG GGATTTATGGTGAGGCATATTTTGGCCGCTGGAGTGGTCAGGCAGTACAG GCCGAAACTGGAGGTCAACTTGTCGGAGTGGCAATACGGGGTAGCGGTTT CGGGTGGCGCGGAGCTCATGGGCCTCGGCGCAAAATCACACCTCCAACTG GGGCATTGGCTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCAA TCGGGCGGCGATCTTGGAAGACGTGGTAATCACCACCCCAGGATTGACAA CTTTCGTAGCTAAATGCTATGGGGAGAAGCCGGCAGACATCATTTCCCAG ATGGACACCGCTGAACGTAGGAGAATTTCCTCGAACACGGGAATCCACCA GGGCGACAGACTGGGACCCGCCCTCTTCTGCATGCCCGTGCGACCGATCT TGCGCAGGTGCCAAGCACAATTCAACGCTTTGGGGGTAGAGCTGTTGGCC TACCTGGACGATCTAGTGCTGGCAATAGGGGAGCTGACGGAAGAAGACTT ACGGGCGATTCATTTCCTCGTGCACGAGCTACACGCATAGGTGTGCAGAT GAACAAGGCTAAGATGAAACAGTGCCCCCAATGAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig4984:12716..13801+

>mRNA_H-paniculata_contig4984.12191.1 ID=mRNA_H-paniculata_contig4984.12191.1|Name=mRNA_H-paniculata_contig4984.12191.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at H-paniculata_contig4984:12716..13801+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGCAATCCGACGCCTTCCCGCCGGAGTTCTGGGAGTTGTTCCTCCA
AAGCAACCTCACGACGCTCGGGGAGAAGTGCCGCCCGACCTGCGTGGGAT
TTATGGTGAGGCATATTTTGGCCGCTGGAGTGGTCAGGCAGTACAGGCCG
AAACTGGAGGTCAACTTGTCGGAGTGGCAATACGGGGTAGCGGTTTCGGG
TGGCGCGGAGCTCATGGGCCTCGGCGCAAAATCACACCTCCAACTGGGGC
ATTGGCTTATCGCCCTCGACTGTACCAATGCATTCAACTCCGTCAATCGG
GCGGCGATCTTGGAAGACGTGGTAATCACCACCCCAGGATTGACAACTTT
CGTAGCTAAATGCTATGGGGAGAAGCCGGCAGACATCATTTCCCAGATGG
ACACCGCTGAACGTAGGAGAATTTCCTCGAACACGGGAATCCACCAGGGC
GACAGACTGGGACCCGCCCTCTTCTGCATGCCCGTGCGACCGATCTTGCG
CAGGTGCCAAGCACAATTCAACGCTTTGGGGGTAGAGCTGTTGGCCTACC
TGGACGATCTAGTGCTGGCAATAGGGGAGCTGACGGAAGAAGACTTACGG
GCGATTCATTTCCTCGTGCACGAGCTACACGCATAGATGGAGCAATCCGA
CGCCTTCCCGCCGGAGTTCTGGGAGTTGTTCCTCCAAAGCAACCTCACGA
CGCTCGGGGAGAAGTGCCGCCCGACCTGCGTGGGATTTATGGTGAGGCAT
ATTTTGGCCGCTGGAGTGGTCAGGCAGTACAGGCCGAAACTGGAGGTCAA
CTTGTCGGAGTGGCAATACGGGGTAGCGGTTTCGGGTGGCGCGGAGCTCA
TGGGCCTCGGCGCAAAATCACACCTCCAACTGGGGCATTGGCTTATCGCC
CTCGACTGTACCAATGCATTCAACTCCGTCAATCGGGCGGCGATCTTGGA
AGACGTGGTAATCACCACCCCAGGATTGACAACTTTCGTAGCTAAATGCT
ATGGGGAGAAGCCGGCAGACATCATTTCCCAGATGGACACCGCTGAACGT
AGGAGAATTTCCTCGAACACGGGAATCCACCAGGGCGACAGACTGGGACC
CGCCCTCTTCTGCATGCCCGTGCGACCGATCTTGCGCAGGTGCCAAGCAC
AATTCAACGCTTTGGGGGTAGAGCTGTTGGCCTACCTGGACGATCTAGTG
CTGGCAATAGGGGAGCTGACGGAAGAAGACTTACGGGCGATTCATTTCCT
CGTGCACGAGCTACACGCATAG
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