prot_H-paniculata_contig4980.12185.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4980.12185.1
Unique Nameprot_H-paniculata_contig4980.12185.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length185
Homology
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BLAST of mRNA_H-paniculata_contig4980.12185.1 vs. uniprot
Match: D8LEV4_ECTSI (C2 domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEV4_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.700e-36
Identity = 81/192 (42.19%), Postives = 109/192 (56.77%), Query Frame = 0 
Query:    1 MATTSIDLATIHNGYNYVSLFSTGPNSGKDEQVGGLLGQLILRLNWVEPGAGTNTEKRAE----YATLLIRGASSLATAKSHGASISHCVVKWRGMELGRTQSCRNTLDPHWGEEKFQLALSDHSIEETPA---LLMEVWAEDTRGNWRHFLGQVAIEAGEVESSTPGFRSLALTRKPAAELRPSAQKFVQG 185
            +A  S+D+  + +GYNYV LFS+G                       EPG G  +++       Y TL+I GAS LA A   G S  +CVVKW G+ELGRT++C NT +P WG+E+F+LAL      +      L++EVW ED  G    FLGQV ++A ++E   PG R + L+RKPAAEL+ S QK VQG
Sbjct: 4101 LAYASVDINAVRDGYNYVQLFSSGHRDDXXXXX------XXXXXXXAEPGEGGGSKEELGWGRGYTTLVIHGASGLAKADRLGDSDPYCVVKWGGVELGRTKTCPNTREPKWGDERFRLALPAEEPNDKKKHLPLILEVWDEDMPGTKGDFLGQVVLQANKLEDPAPGPRGIVLSRKPAAELKLSKQKLVQG 4286
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BLAST of mRNA_H-paniculata_contig4980.12185.1 vs. uniprot
Match: A0A6H5KK33_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK33_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.060e-8
Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0 
Query:  128 LLMEVWAEDTRGNWRHFLGQVAIEAGEVESSTPGFRSLALTRKPAAELRPSAQKFVQG 185
            L++EVW ED  G    FLGQV ++A ++E   PG R + L++KPAAEL+ S QK VQG
Sbjct: 1194 LILEVWDEDMPGTKGDFLGQVVLQANKLEDPAPGPRGIVLSKKPAAELKLSKQKLVQG 1251
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4980.12185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEV4_ECTSI1.700e-3642.19C2 domain containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KK33_9PHAE2.060e-851.72C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 61..164
e-value: 1.9E-4
score: 30.8
IPR000008C2 domainPFAMPF00168C2coord: 64..160
e-value: 5.4E-9
score: 36.3
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 63..174
e-value: 1.0E-11
score: 46.7
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 34..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4980contigH-paniculata_contig4980:4464..5548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4980.12185.1mRNA_H-paniculata_contig4980.12185.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4980 4464..5562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4980.12185.1 ID=prot_H-paniculata_contig4980.12185.1|Name=mRNA_H-paniculata_contig4980.12185.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=185bp
MATTSIDLATIHNGYNYVSLFSTGPNSGKDEQVGGLLGQLILRLNWVEPG
AGTNTEKRAEYATLLIRGASSLATAKSHGASISHCVVKWRGMELGRTQSC
RNTLDPHWGEEKFQLALSDHSIEETPALLMEVWAEDTRGNWRHFLGQVAI
EAGEVESSTPGFRSLALTRKPAAELRPSAQKFVQG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf