prot_H-paniculata_contig49741.12173.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49741.12173.1
Unique Nameprot_H-paniculata_contig49741.12173.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length99
Homology
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: UPI000E6F524C (uncharacterized protein LOC113279956 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6F524C)

HSP 1 Score: 83.2 bits (204), Expect = 1.540e-18
Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 0
Query:    5 PKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVETELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSR 99
            PKS+R+ +  KY   + +AM  E+  L+E GT+  TELP G+KA+GSKW+ T K D++G +++ KAR V  GN QV G+DY++TFAP     T R
Sbjct:   18 PKSFREAM--KYPG-WKKAMAEEIRALEEQGTWDLTELPPGKKALGSKWIYTEKYDENGKLVRLKARLVIFGNHQVEGLDYNETFAPVANMTTVR 109          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5K282_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K282_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 2.510e-18
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+    +  P+ A
Sbjct:  118 VEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHLSSACPSAA 214          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5KPX2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPX2_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.540e-18
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:  104 VEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAA 200          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5JJW3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJW3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 5.870e-18
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM+ E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:   43 VEAVPMTYKDVICSKYKVFWEAAMEEEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAA 139          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5JUN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 7.480e-18
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G IL  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:   12 VEAVPMTYKDVMCSKYKVFWETAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLILDFKARVVARGFSQIPGIDFHRSSSACPSAA 108          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5K236_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K236_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 8.460e-18
Identity = 44/97 (45.36%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT + G I+  KAR V  G  ++ G+D+  + +  P+ A
Sbjct:   12 VEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTKEKGLIVDFKARMVARGFSRIPGIDFHHSSSACPSAA 108          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5JXX7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.750e-18
Identity = 46/97 (47.42%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +YRDV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:  304 VEAVPMTYRDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFYHSSSACPSAA 400          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5JRB0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRB0_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 9.820e-18
Identity = 46/97 (47.42%), Postives = 62/97 (63.92%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM  E+ G  + GTF +  ELP GRKAIGSKWVL+WKT + G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:  104 VEAVPMTYKDVMCSKYKVFWEAAMKNEIDGHDKTGTFTKVKELPEGRKAIGSKWVLSWKTSEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAA 200          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5K1I0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1I0_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.380e-17
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:  355 VEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAA 451          
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.390e-17
Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    1 VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVET-ELPVGRKAIGSKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATA 96
            VE  P +Y+DV+ SKYK  +  AM +E+ G  + GTF +  ELP GRKAIGSKWV +WKT++ G I+  KAR V  G  Q+ G+D+  + +  P+ A
Sbjct:  496 VEAVPMTYKDVMCSKYKVFWEAAMKKEIDGHDKTGTFTKVKELPEGRKAIGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAA 592          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49741.12173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000E6F524C1.540e-1847.37uncharacterized protein LOC113279956 n=1 Tax=Papav... [more]
A0A6H5K282_9PHAE2.510e-1846.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KPX2_9PHAE3.540e-1846.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JJW3_9PHAE5.870e-1846.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JUN0_9PHAE7.480e-1847.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K236_9PHAE8.460e-1845.36Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JXX7_9PHAE9.750e-1847.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JRB0_9PHAE9.820e-1847.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K1I0_9PHAE1.380e-1746.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JI74_9PHAE1.390e-1746.39Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 40..92
e-value: 8.9E-11
score: 41.9
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 5..91
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 5..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49741contigH-paniculata_contig49741:38..334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49741.12173.1mRNA_H-paniculata_contig49741.12173.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49741 38..334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49741.12173.1 ID=prot_H-paniculata_contig49741.12173.1|Name=mRNA_H-paniculata_contig49741.12173.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=99bp
VEEAPKSYRDVLESKYKSVFLEAMDREMIGLKEAGTFVETELPVGRKAIG
SKWVLTWKTDQDGFILKPKARFVCLGNLQVAGVDYDDTFAPTPATATSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like