prot_H-paniculata_contig4973.12171.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4973.12171.1
Unique Nameprot_H-paniculata_contig4973.12171.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length572
Homology
BLAST of mRNA_H-paniculata_contig4973.12171.1 vs. uniprot
Match: D7FYV2_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV2_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 9.860e-173
Identity = 334/568 (58.80%), Postives = 393/568 (69.19%), Query Frame = 0
Query:    8 GSDEVDTDWDREFF----GAGGKGESSPNDARDITRANIAKGLKGLLGGGTS----QVDSEDAKTGGAGDTLTGVPDKCRVVGRMLRGGKAGPAVTIVKYPRACHLICLRVGAGPDGEEAGGSSVASPDLNRGDLSIGGLASSPIVGESLTPSNSKAQGRAMHGQRMVEWLESLISKRAASHRSKAELKAANARLVRALQVMEKKKLTSRNTKVFLECSISTWRLGERESCVSVLKSFFHILRAQSRSISRKSVQGLGSPST-SSDTGHDTYTMFRHTIKMLEIASLLLKPESSLWVLHMRLGSQSRNVGVNLSRSSRGVFGDMLRIACSAFPSYREAFSLVELRAIAHHLGDIVDAGGTSN-TDSSDSDSSMGRFTN-GVHGVREH------VVGSWDSYDEEEG--GVGYSWSAQGGSGRHQAPTLVTRMPQAICNNYLRVYARAVRGRSEPSGGPGSGSVYRGSM-DPVRGGARSPVIPSPNTLLQRSLSSSSAVSRVSSHFSHFTSSSSPVQLMLPP-FNQRSSGVADDDALPGRPGNSNGGSRGRDGKSSAALDAHAARVKYL 554
            GSD+ DTDWD E      G G  GE SPN+ARD+ RANIA+GLK LL G       Q  + DA+ G     LTGVPDKCRVVGR+L+GG+AGP VTIVKYPRACHL+CLRV    D + AG ++  +             A +   G +LTP  SK +GRAMHGQRMVEWLE+LISKRA  +R+K EL+AAN+RLV+ LQVMEK+ L  RNTKVFLECS+STWRLGERESCVSVLKS+F ILR QSR+ +RK+ QG G  +   SDT  DTYTMF+HT+KMLEIASLLL+P SSLW+L M++ SQ +     + RS+RGVFGDMLRIACSAFPSYREAFSLVELRA  HHLGDIV AG  +  ++   SDS MG F + G+HG            G WD  +++ G  GV Y+WSAQGG+GRHQAPTLV RMPQAIC NYLRVYARAVRG S+ SGGPGS         D  RGGARSP +PSPNTLL RSLSSSSA+SRVSSHFSHF S+ +PV+L LP  F +R +G   ++A          G            DA AAR KYL
Sbjct:  519 GSDDADTDWDLELGLVGPGTGRTGEPSPNNARDVKRANIAEGLKALLRGAPQGCKHQSGASDARQG-----LTGVPDKCRVVGRLLKGGRAGPDVTIVKYPRACHLLCLRVSVEQDSKTAGATAAPTD------------AGASFAG-ALTP--SKGKGRAMHGQRMVEWLETLISKRADLYRTKNELRAANSRLVKGLQVMEKR-LNPRNTKVFLECSMSTWRLGERESCVSVLKSYFQILRMQSRTNARKAAQGGGGTTPLGSDTTKDTYTMFQHTLKMLEIASLLLRPNSSLWLLRMQINSQHQFTAGGVERSARGVFGDMLRIACSAFPSYREAFSLVELRATVHHLGDIVAAGAEAGGSEDGSSDSGMGDFADYGMHGAAGRGGGXXKAGGRWDGSEDDSGDWGVEYTWSAQGGAGRHQAPTLVDRMPQAICTNYLRVYARAVRGGSDRSGGPGSSXXXXXXXTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNVTPVELQLPATFRRRGNGADGEEAARAF----GAGXXXXXXXXXXXXDARAARAKYL 1061          
BLAST of mRNA_H-paniculata_contig4973.12171.1 vs. uniprot
Match: A0A6H5KJE7_9PHAE (DENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJE7_9PHAE)

HSP 1 Score: 550 bits (1417), Expect = 1.130e-171
Identity = 340/568 (59.86%), Postives = 392/568 (69.01%), Query Frame = 0
Query:    8 GSDEVDTDWDREFF----GAGGKGESSPNDARDITRANIAKGLKGLLGG----GTSQVDSEDAKTGGAGDTLTGVPDKCRVVGRMLRGGKAGPAVTIVKYPRACHLICLRVGAGPDGEEAGGSSVASPDLNRGDLSIGGLASSPIVGESLTPSNSKAQGRAMHGQRMVEWLESLISKRAASHRSKAELKAANARLVRALQVMEKKKLTSRNTKVFLECSISTWRLGERESCVSVLKSFFHILRAQSRSISRKSVQG-LGSPSTSSDTGHDTYTMFRHTIKMLEIASLLLKPESSLWVLHMRLGSQSRNVGVNLSRSSRGVFGDMLRIACSAFPSYREAFSLVELRAIAHHLGDIVDAGGTSN-TDSSDSDSSMGRFTN-GVHGVREHVVG------SWDSYDEEEG--GVGYSWSAQGGSGRHQAPTLVTRMPQAICNNYLRVYARAVRGRSEPSGGPGSGSVYRGSM-DPVRGGARSPVIPSPNTLLQRSLSSSSAVSRVSSHFSHFTSSSSPVQLMLPP-FNQRSSGVADDDALPGRPGNSNGGSRGRDGKSSAALDAHAARVKYL 554
            GSD+ DTDWD E      G G  GE SPN+ARD+ RANIA+GL+ LL G    G  Q  + DA+ G     LTGVPDKCRVVGR+LRGG+AGP VTIVKYPRACHL+CLRV    D    G  + A P   RG  + G L              SK +GRAMHGQRMVEWLE+LISKRA  +RSK EL+AAN+RLV+ LQVMEK+ L   NTKVFLECS+STWRLGERESCVSVLKS+F ILR QSR+ +RK+ QG  G+    SDT  DTYTMF+HT+KMLEIASLLL+P SSLW+L M++ SQ +     + RS+RGVFGDMLRIACSAFPSYREAFSLVELRA  HHLGDIV AG  +  +      S MG F + G+HG      G       WD  ++  G  GV Y+WSAQGG+GRHQAPTLV RMPQAIC NYLRVYARAVRG S+ SGGPGS         D  RGGARSP +PSPNTLL RSLSSSSA+SRVSSHFSHF S+ +PV+L LP  F +R SG   ++A         GG+R     SS ALDA AAR KYL
Sbjct:  147 GSDDADTDWDLELGLVGPGTGRTGEPSPNNARDVKRANIAEGLRALLRGAPQGGKHQPGASDARQG-----LTGVPDKCRVVGRLLRGGRAGPDVTIVKYPRACHLLCLRVSVEQDNTTTG--ATAPPTDARGSFA-GALTL------------SKGKGRAMHGQRMVEWLETLISKRADLYRSKNELRAANSRLVKGLQVMEKR-LNPCNTKVFLECSMSTWRLGERESCVSVLKSYFQILRMQSRTNARKAAQGGSGTTPLGSDTTKDTYTMFQHTLKMLEIASLLLRPNSSLWLLRMQINSQHQFTAGGVERSARGVFGDMLRIACSAFPSYREAFSLVELRATVHHLGDIVAAGAEAGGSXXXXXXSGMGDFADYGMHGAAGRGGGFGKAGRGWDGSEDNSGDWGVEYTWSAQGGAGRHQAPTLVDRMPQAICTNYLRVYARAVRGGSDRSGGPGSSXXXXXXXTDGFRGGARSPGLPSPNTLLLRSLSSSSAISRVSSHFSHFNSNVTPVELQLPATFRRRGSGADGEEAARAFGA---GGARXXX-XSSGALDALAARAKYL 689          
BLAST of mRNA_H-paniculata_contig4973.12171.1 vs. uniprot
Match: A0A836CI77_9STRA (DENN domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI77_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.050e-25
Identity = 130/493 (26.37%), Postives = 199/493 (40.37%), Query Frame = 0
Query:   15 DWDREFFGAGGKGESSPNDARDITRANIAKGLKGLLGG--GTSQVDSEDAKTGGAGDTLTG-VPDKCRVVGRMLRGGKAGPAVTIVKYPRACHLICLRVGAGPDGEEAGGSSVASPDLNRGDLSIGGLASSPIVGESLTPSNSKAQGRAMHGQRMVEWLESLISKRAASHRSKAELKAANARLVRALQVMEKK--KLTSRNTKVFLECSISTWRLGERESCVSVLKSFFHILRAQSR---SISRKSVQGLGSPSTSSDTGHDTYTMFRHTIKMLEIASLLLKPESSLWVLHMRLGSQSRNVGVNLSRSSR-----------------------------------------GVFGDMLRIACSAFPSYREAFSLVELRAIAHHLGDIVDAGGTSNTDSSDSDSSMGRFTNGVHGVREHVVGSWD-----------SYDEEEGGVG------------YSWSAQGGSGRHQAPTLVTRMPQAICNNYLRVYARA 435
            DW+RE  GA        +D+ + TRA +AKG + LL G  G +Q  + +A T       +G VPD CR+  ++LRG   G  V I++YPRACHL+ L+   G                                           QGRAMHG  ++EWL +L+ +  A+  +K + +A        L  +E K  +L      + LE   +  R G+  + ++V   +  +L  Q R   +++  + +  G P       H  + + R T++MLE+ +L  +P      L+ R G ++   G   S ++                                          G F +MLR AC  FP+YR+ F+L+ELRA+AHH  +IV A      DS D D      + G  G      GS             S ++ EG  G            + W AQ  +      T +  + Q +C NYL +YARA
Sbjct:  203 DWEREAVGA--------SDSPETTRAIMAKGFRLLLKGSLGDAQAGNNNASTASVTGQASGAVPDSCRLADKLLRGDP-GQTVRIIRYPRACHLVTLKALEG-------------------------------------------QGRAMHGPALIEWLTTLVQRHVAADAAK-DARAQRRASAEVLLSLEAKSARLDVTAAHMLLESCAAAVRAGDDAAALNVTWRYLRVLDQQHRPSAAVAESARRFGGDPDD-----HSQFALLRLTLQMLELVAL--RPN-----LYERSGVRADGAGGGGSTAAAKSVAGSTSNPHLRGAAELRAPVRPPDKPPPVAASAAQPAAPGSFAEMLRTACQVFPAYRDCFALLELRAVAHHFREIVQAAEAEADDSGDGDD----VSEGGSGEDSCATGSEAGNARGQQRGARSANKGEGRAGSARLSLRSRPGHFLWVAQ--TADKLVHTKLRYLAQTVCANYLELYARA 624          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4973.12171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYV2_ECTSI9.860e-17358.80PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5KJE7_9PHAE1.130e-17159.86DENN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CI77_9STRA1.050e-2526.37DENN domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 184..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4973contigH-paniculata_contig4973:2456..10161 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4973.12171.1mRNA_H-paniculata_contig4973.12171.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4973 2456..10161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4973.12171.1 ID=prot_H-paniculata_contig4973.12171.1|Name=mRNA_H-paniculata_contig4973.12171.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=572bp
SSLAGASGSDEVDTDWDREFFGAGGKGESSPNDARDITRANIAKGLKGLL
GGGTSQVDSEDAKTGGAGDTLTGVPDKCRVVGRMLRGGKAGPAVTIVKYP
RACHLICLRVGAGPDGEEAGGSSVASPDLNRGDLSIGGLASSPIVGESLT
PSNSKAQGRAMHGQRMVEWLESLISKRAASHRSKAELKAANARLVRALQV
MEKKKLTSRNTKVFLECSISTWRLGERESCVSVLKSFFHILRAQSRSISR
KSVQGLGSPSTSSDTGHDTYTMFRHTIKMLEIASLLLKPESSLWVLHMRL
GSQSRNVGVNLSRSSRGVFGDMLRIACSAFPSYREAFSLVELRAIAHHLG
DIVDAGGTSNTDSSDSDSSMGRFTNGVHGVREHVVGSWDSYDEEEGGVGY
SWSAQGGSGRHQAPTLVTRMPQAICNNYLRVYARAVRGRSEPSGGPGSGS
VYRGSMDPVRGGARSPVIPSPNTLLQRSLSSSSAVSRVSSHFSHFTSSSS
PVQLMLPPFNQRSSGVADDDALPGRPGNSNGGSRGRDGKSSAALDAHAAR
VKYLGPEAAAGGAAGGDSGSGG
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