mRNA_H-paniculata_contig4970.12167.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A0A6H5L845_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L845_9PHAE) HSP 1 Score: 333 bits (855), Expect = 3.650e-109 Identity = 155/248 (62.50%), Postives = 192/248 (77.42%), Query Frame = 2
Query: 263 VCFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPTIIQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEFRNQLAPFLASTIKNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTVPSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATFFNGRQRMG 1006
VCFE LC KGASVM DG F R++RLP+R+CRHF+C+ CAPTII +KCPVCRR++ +T DVPDP+A P WF ++D DQ+ I+K ELVDALKGMF VEP ALE+V+E NW WDTD+NGT+D EFRN+LAPFLA +I N+ +R+ + DL +PAEWF+ WDED SGSLER EIVRAL+KT+P F+G+D+GWL TF A+WS+ DPD DGSIT AEF+MP GLY+TLVA F R R+G
Sbjct: 49 VCFEHLCAKGASVMVDGSGHQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPIADPVRWFHVVDRDQNGSIEKSELVDALKGMFPVEPGALEEVIEMNWRSWDTDSNGTLDTAEFRNRLAPFLAQSIGNMRQRIIRQ--LPDLMNQPAEWFKHWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDGDGSITGAEFMMPGGLYETLVANFC--RHRLG 292
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: C1E6Q1_MICCC (Uncharacterized protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6Q1_MICCC) HSP 1 Score: 144 bits (363), Expect = 1.510e-35 Identity = 87/250 (34.80%), Postives = 129/250 (51.60%), Query Frame = 2
Query: 263 VCFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPT--IIQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEF--RNQLAPFLASTIKNLAKRLDEEEDFV-DLQTEPAEWFRKWDEDGSGSLERKEIVRALVKT------VPSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVAT 979
VCF+PLC + +V+T + R +R R C HF CA + KCP+CR + VP P P WF +D+D D + E+++AL+ + A+E+ + W +WD + +G ++ +E R L ++ K+ KR E + P EWF WDEDGSG LE++E+VRALVKT +PS + + AVW +FDPD G++ EF+M DGL DT+VA+
Sbjct: 98 VCFDPLCAQRTAVLTQEHGRG---MRKERT--RSCAHFFHLACANELRVHHAKCPICRAPFNGVLPVPSPGEDPDGWFAAVDVDGDGRLSPSEVLEALRAQIRCDWHAIERQLPKLWRRWDVNGDGYVEKNELVSRGGLIEYVT---KHFPKREHRERPPPPSIARAPNEWFEYWDEDGSGELEKEEVVRALVKTFGLGADMPSLRN-----IRQIVDAVWCVFDPDGSGAVDRREFLMRDGLADTIVAS 334
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: D7FYD7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD7_ECTSI) HSP 1 Score: 135 bits (340), Expect = 4.490e-35 Identity = 60/87 (68.97%), Postives = 72/87 (82.76%), Query Frame = 2
Query: 734 DLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTVPSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATFFNGR 994
DL+ +PAEWF+ WDED SGSLER EIVRAL+KT+P F+G+D+GWL TF A+WS+ DPDEDGSIT AEF+MP GLY+TLVA F R
Sbjct: 11 DLKDQPAEWFKYWDEDESGSLERPEIVRALIKTIPEFTGRDEGWLGGTFAAIWSIIDPDEDGSITGAEFMMPGGLYETLVANFCRHR 97
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A0A0G4H6Z1_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H6Z1_9ALVE) HSP 1 Score: 141 bits (356), Expect = 6.530e-34 Identity = 84/247 (34.01%), Postives = 131/247 (53.04%), Query Frame = 2
Query: 248 CPSKQVCFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPTII---QKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEFRNQLAPFLASTIKNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTVP-SFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVA 976
CP +CF+ L + +V+T +R +R C+H K C + QK CP+CRR+++ T DVPDP PR WF+++DLD + +D+ E+++ LK V+ + LE ++ W QWD D +G I E + L ++ R + D++ E + WFR WDE+ +GSL+++E+ RA +KT S + + A+W FDPD G I E EFV +GL DT++A
Sbjct: 182 CP---ICFDELYKEPQAVLT---------WRG----RRCCQHVFHKRCVGDMRRARQKHCPLCRRDFDDTLDVPDPTKDPRGWFRVVDLDGNGKLDRKEVIEVLKAALPVDWKKLEARLDNLWRQWDLDGSGFISEREMLDPQRGLLVWVRNHMDVRRNRGPP-PDIRREKSGWFRYWDENSNGSLDKEEVCRAFIKTFNLSRDSEKVAGVRALLDALWVEFDPDGSGGIDEGEFVQREGLADTILA 411
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A0A7J6M912_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6M912_PEROL) HSP 1 Score: 134 bits (338), Expect = 1.370e-30 Identity = 90/260 (34.62%), Postives = 122/260 (46.92%), Query Frame = 2
Query: 323 APSFFRSQRLP--------KRICRHFICKTCAPTIIQK--------------KCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEF---RNQLAPFLASTI-----KNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTV-------PSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATFFNG 991
A +F RLP KR C H+ C ++ K +CP+CR ++ +PD PR WFQL D+D +DK E++ AL + VE L + +E NW WD DN+G+I L EF R L +L +NL R D D DL + P EWF WD +G+GSLER EIVRA+V+T PSF D L E + +W E G +T EF P G+ D + + +G
Sbjct: 133 AVCYFELYRLPVGILRSQSKRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGTLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPD---DIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTFCVSPSGEPSFKRAFD--LREMALFIWDSLGYHEFGELTFEEFNAPFGVGDQIYHNYIHG 387
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A0A7J6NT57_PEROL (RING-type domain-containing protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NT57_PEROL) HSP 1 Score: 135 bits (339), Expect = 2.260e-30 Identity = 90/260 (34.62%), Postives = 122/260 (46.92%), Query Frame = 2
Query: 323 APSFFRSQRLP--------KRICRHFICKTCAPTIIQK--------------KCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEF---RNQLAPFLASTI-----KNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTV-------PSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATFFNG 991
A +F RLP KR C H+ C ++ K +CP+CR ++ +PD PR WFQL D+D +DK E++ AL + VE L + +E NW WD DN+G+I L EF R L +L +NL R D D DL + P EWF WD +G+GSLER EIVRA+V+T PSF D L E + +W E G +T EF P G+ D + + +G
Sbjct: 150 AVCYFELYRLPVGILRSQSKRACSHYFHTECIKRLVAKNAHEARNAGHAAVRECPICRAKFSDIKTLPDVFKDPRAWFQLCDIDCGGSLDKEEVLGALGAVLPVERDKLAEAIEENWVVWDPDNDGSITLTEFVEPRRGLREYLLRNFNVIKTENLNIRPD---DIPDLDSHPLEWFNFWDGNGNGSLERSEIVRAIVRTFCVSPSGEPSFKRAFD--LREMALFIWDSLGYHEFGELTFEEFNAPFGVGDQIYHNYIHG 404
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: D7FYD8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD8_ECTSI) HSP 1 Score: 122 bits (305), Expect = 4.800e-30 Identity = 51/83 (61.45%), Postives = 64/83 (77.11%), Query Frame = 2
Query: 263 VCFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPTIIQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQ 511
VCFE LC KGASVM DG Q F R++RLP+R+CRHF+C+ CAPTII +KCPVCRR++ +T DVPDP+ P WF ++D DQ
Sbjct: 17 VCFEHLCAKGASVMVDGSGQQAGFLRAERLPRRVCRHFLCQECAPTIIPRKCPVCRRDFVSTLDVPDPITDPVRWFHVVDRDQ 99
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A4S2X8_OSTLU (Uncharacterized protein n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S2X8_OSTLU) HSP 1 Score: 127 bits (320), Expect = 2.030e-29 Identity = 78/248 (31.45%), Postives = 129/248 (52.02%), Query Frame = 2
Query: 266 CFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPTI---IQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEF--RNQLAPFLASTIKNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTVPSFSGKDDGW----LSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATF 982
CFEPLC + +V D R C+HF+ + CA + I CP+CR + + VP P WF+L D+D + +DK +++ ++ V+ R +++ + + W++WD +++G + + + L F++ K RL E + V T+ WF+ WDED SG+LE+ E+VRAL+KT F KDD + ++W +FD D+ G I EF++ DGL D+++A F
Sbjct: 93 CFEPLCKERTAVFVDES------------GARTCKHFLHERCARAVCEHIGSVCPICRTAFASARGVPFPTEDANEWFRLCDVDGNGKLDKEQVLTVIRAQIPVDWRKIDKDLGSLWARWDPESSGALGKAQLVGADGLLEFVS---KKYPPRLREYK-HVPHVTDKRAWFKFWDEDDSGTLEKDEVVRALIKT---FGIKDDVAHIQDVRSMVESIWCVFDLDDSGGIDLTEFLLEDGLGDSIMAAF 321
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: A0A7J6LQN2_PERCH (RING-type domain-containing protein n=1 Tax=Perkinsus chesapeaki TaxID=330153 RepID=A0A7J6LQN2_PERCH) HSP 1 Score: 122 bits (306), Expect = 4.920e-26 Identity = 85/282 (30.14%), Postives = 124/282 (43.97%), Query Frame = 2
Query: 185 PLAADSRPESLLIMHMVGQSPCPSKQVC-FEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHFICKTCAPTIIQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEANWSQWDTDNNGTIDLDEF---RNQLAPFLASTIKNLAKRLDE--EEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTV-------PSFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVATFFNG 991
P R ESL I + VC FE L + + P +F ++ + + + ++ A ++CP+C + +PD PR WFQL D+D +D+ E++ AL + V L +E NW WD DN+G I L EF R L +L N+ D DL + P WF WD + +GSLER E+VRA++KT PSF+ D + E M +W E G +T EF P G+ D + F +G
Sbjct: 132 PTVLSRRYESLSIAERFNEC-----SVCYFELFRLPVGILRLQSRRACPHYFHTECIKRLVAKNASDARAAGYPSAQECPICGARFSEIKTLPDVFKDPRAWFQLCDIDSGGTLDQEEVLGALGAVLPVARDKLAVAIEDNWEVWDPDNDGVITLTEFVEPRRGLRQYLLRNFNNIKSDSVNLRPSDIPDLDSHPMAWFDFWDGNRNGSLERSEVVRAIIKTFCLNPGGEPSFARAFD--IRELAMDIWDSLGYHEFGELTFEEFNAPFGVGDQIYHNFIHG 406
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Match: K8EJF7_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EJF7_9CHLO) HSP 1 Score: 117 bits (294), Expect = 3.970e-25 Identity = 64/196 (32.65%), Postives = 107/196 (54.59%), Query Frame = 2
Query: 404 IQKKCPVCRREYEATFDVPDPLAQPRTWFQLIDLDQDDHIDKPELVDALKGMFSVEPRALEQVVEAN-WSQWDTDNNGTIDLDEFRNQ--LAPFLASTIKNLAKRLDEEEDFVDLQTEPAEWFRKWDEDGSGSLERKEIVRALVKTVP-SFSGKDDGWLSETFMAVWSLFDPDEDGSITEAEFVMPDGLYDTLVAT 979
I CP+CR + +VP P WF ++D+D D + +LV L+ F V+ R +E+ + W ++D +N+G I DE L +L T + +R + +L+ +P +WF WDED SG+L+ +E++RALVKT + + ++E+ +VW FD ++ G I+ EF+ P+GL ++VAT
Sbjct: 154 ISATCPICRVPVYGSVNVPSCSTNPNLWFDIVDIDDDGKVSPTDLVTILRAQFLVDWRTIEKKLTGEIWPKYDANNDGFISRDELLKPDGLLDYLLKTFETPKRRF---RNCPNLEMQPRKWFEYWDEDHSGTLDSEELIRALVKTFNLNAEVRSLRAMAESVRSVWGAFDQEDKGEISLDEFIAPEGLAQSIVAT 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4970.12167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4970.12167.1 >prot_H-paniculata_contig4970.12167.1 ID=prot_H-paniculata_contig4970.12167.1|Name=mRNA_H-paniculata_contig4970.12167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp MHMVGQSPCPSKQVCFEPLCLKGASVMTDGQYQAPSFFRSQRLPKRICRHback to top mRNA from alignment at H-paniculata_contig4970:5536..14506+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4970.12167.1 ID=mRNA_H-paniculata_contig4970.12167.1|Name=mRNA_H-paniculata_contig4970.12167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8971bp|location=Sequence derived from alignment at H-paniculata_contig4970:5536..14506+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4970:5536..14506+ >mRNA_H-paniculata_contig4970.12167.1 ID=mRNA_H-paniculata_contig4970.12167.1|Name=mRNA_H-paniculata_contig4970.12167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig4970:5536..14506+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |