prot_H-paniculata_contig4970.12166.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4970.12166.1
Unique Nameprot_H-paniculata_contig4970.12166.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length212
Homology
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BLAST of mRNA_H-paniculata_contig4970.12166.1 vs. uniprot
Match: D7FYD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYD9_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 2.780e-23
Identity = 79/211 (37.44%), Postives = 94/211 (44.55%), Query Frame = 0 
Query:    1 MDSSYDLRSALADALPAAGPSRATVKAMDDVGFKSDPKNNDMKQLFVCLDLASTSGANPGGEGTALGDDGLLTMGAGSGIAAPSASQTLLDYRREKKAAQEAAEAETAKRLAAGSGKEFDKKISLSSSPARGVGLARAAGVGGQELDEAASDERHLRKVNQSRTAAKMSTKQKRRIKSGKQHGTSYEEKYEGKVMNKTKRKGRMAAMKQMY 211
            MD+SYDLRSALADALPAAGP+RA VKAMDD+GFK+DPKNNDMK+LFV LD+A                                                +A                                         + L  A  D   L++ N S+TAAKMS              T+YEEKY GKV+N++KRKGRM AMKQMY
Sbjct:    1 MDNSYDLRSALADALPAAGPTRAAVKAMDDIGFKADPKNNDMKELFVGLDIAQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQA-----------------------------------------KNLLAAGKDPASLKRANLSKTAAKMSXXXXXXXXXXXXXXTNYEEKYAGKVVNRSKRKGRMLAMKQMY 170
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4970.12166.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYD9_ECTSI2.780e-2337.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 89..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4970contigH-paniculata_contig4970:2486..4349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4970.12166.1mRNA_H-paniculata_contig4970.12166.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4970 1149..4641 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4970.12166.1 ID=prot_H-paniculata_contig4970.12166.1|Name=mRNA_H-paniculata_contig4970.12166.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp
MDSSYDLRSALADALPAAGPSRATVKAMDDVGFKSDPKNNDMKQLFVCLD
LASTSGANPGGEGTALGDDGLLTMGAGSGIAAPSASQTLLDYRREKKAAQ
EAAEAETAKRLAAGSGKEFDKKISLSSSPARGVGLARAAGVGGQELDEAA
SDERHLRKVNQSRTAAKMSTKQKRRIKSGKQHGTSYEEKYEGKVMNKTKR
KGRMAAMKQMY*
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