prot_H-paniculata_contig4966.12159.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4966.12159.1
Unique Nameprot_H-paniculata_contig4966.12159.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A6H5JUJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ5_9PHAE)

HSP 1 Score: 500 bits (1288), Expect = 3.240e-178
Identity = 255/271 (94.10%), Postives = 265/271 (97.79%), Query Frame = 0
Query:    2 ERNAEDTALVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEES 272
            ER AEDT LVLQLTNPDQREGALLELSKKREAFTDLAPILWHS+GTISALLQE+VAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YIC TAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPD+LR+NTFTNVLKDDVSVKRWLT LLFN+TE++
Sbjct:    6 ERTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDSLRNNTFTNVLKDDVSVKRWLTSLLFNLTEQT 276          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: D7FW54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW54_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 2.440e-177
Identity = 256/272 (94.12%), Postives = 264/272 (97.06%), Query Frame = 0
Query:    2 ERNAEDTALVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEESQ 273
            ER AEDT LVLQLTNPDQREGALLELSKKREAFTDLAPILWHS+GTISALLQE+VAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YIC TAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALR+NTFTNVLKDDVSVKRWLT LLFN+TE  +
Sbjct:   63 ERTAEDTQLVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTESKE 334          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A836CJ98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ98_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 6.260e-167
Identity = 240/261 (91.95%), Postives = 253/261 (96.93%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITE 270
            LV QLTNP+QREGALLELSKKREAF+DLAPILWHSFGTISALLQEIVAIYP+LSPPTLTPHASNRVCNALALLQCVASHPETRA+FL AHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDDSDVI FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD++GL YICATAERFYAVSTVL NMVAVLVE+PSVRLLKH+VRCYLRLSDNLRAREALRQCLPDALRD TF + LKDDVSVKRWL+QLL+NI+E
Sbjct:   30 LVGQLTNPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRAVFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDSDVITFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDELGLNYICATAERFYAVSTVLSNMVAVLVEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDALRDATFASALKDDVSVKRWLSQLLYNISE 290          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A7S2V242_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V242_9STRA)

HSP 1 Score: 462 bits (1190), Expect = 7.340e-163
Identity = 236/261 (90.42%), Postives = 248/261 (95.02%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITE 270
            LV+QLT+PDQRE ALLELSKKREAF DLAPILWHSFGTISALLQEIVAIYPLLSPPTL+  ASNRVCNALALLQCVASH ETRALFL AH+PLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVI+FLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+MGL YICATAERFYAVSTVL NMVAVL E+PSVRLLKH+VRCYLRLSDNLRAREALRQCLP+ LRD+TFT VLKDDV+V+RWL QLLFNI E
Sbjct:   25 LVVQLTDPDQRETALLELSKKREAFADLAPILWHSFGTISALLQEIVAIYPLLSPPTLSAQASNRVCNALALLQCVASHQETRALFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVIHFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLAEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPEGLRDSTFTGVLKDDVTVRRWLAQLLFNINE 285          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A7S2S6Y0_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2S6Y0_9STRA)

HSP 1 Score: 458 bits (1179), Expect = 1.950e-161
Identity = 234/263 (88.97%), Postives = 248/263 (94.30%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEES 272
            LVLQLTNP+QRE ALLELSKKREAF+DLAPILWHSFGTISALLQEI++IYP+LSPP L   ASNRVCNALALLQCVASHPETR+LFL AHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDS+VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLD+MGL YICATAERFYAVSTVL NMVAVLVE PSVRLLKH+VRCYLRLSDNLRAREALRQCLPD+LRD TF   L+DDV+VKRWL+QLL NI+E S
Sbjct:   15 LVLQLTNPEQRESALLELSKKREAFSDLAPILWHSFGTISALLQEIMSIYPMLSPPNLPHGASNRVCNALALLQCVASHPETRSLFLSAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLVEQPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDSLRDATFNVALRDDVTVKRWLSQLLINISENS 277          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: F0Y9A1_AURAN (Uncharacterized protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y9A1_AURAN)

HSP 1 Score: 448 bits (1152), Expect = 3.490e-157
Identity = 225/266 (84.59%), Postives = 244/266 (91.73%), Query Frame = 0
Query:   10 LVLQLTNPDQ---REGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEES 272
            LVLQLT PD    RE ALLELSKKRE FTDLAPILWHSFGT+  LLQEIV+IYP+LSPP LT HASNRVCNALALLQCVASHPETR LFL AH+PLYLYPFLNTVSKNRPFEYLRLTSLGV+GALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGL Y+CATAERFYAVSTVL NMV  LVE PS+RLLKH+VRCYLRLSDNLRAREALRQCLP++LRD+TF   +KDD++VKRWL+ LL+NI+E++
Sbjct:   12 LVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLRDHTFAGHIKDDLTVKRWLSSLLYNISEQA 277          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: R1C1A7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C1A7_EMIHU)

HSP 1 Score: 447 bits (1151), Expect = 3.860e-157
Identity = 227/264 (85.98%), Postives = 241/264 (91.29%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEESQ 273
            LVL+LTNP+QRE ALLELSK+RE F DLAPILWHSFGTISALLQEIVAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNT+SK RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YICATAERFYAVSTVLGN+V  LV+ PS RLLKH+VRCYLRLSDN RAREALRQCLPD LRD TF+  LKDDV+ KRWLTQLLFNITE +Q
Sbjct:   23 LVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTISKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLRDATFSACLKDDVTTKRWLTQLLFNITESTQ 286          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A7S0DZ44_9EUKA (Hypothetical protein n=3 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0DZ44_9EUKA)

HSP 1 Score: 446 bits (1148), Expect = 2.030e-156
Identity = 226/264 (85.61%), Postives = 241/264 (91.29%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEESQ 273
            LV +LTNP+QRE ALLELSK+RE F DLAPILWHSFGTISALLQEIVAIYPLLSPP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD+DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YICATAERFYAVSTVLGN+V  LVE PS RLLKH+VRCYLRLSDN RAREALRQCLP+ LRD TF+  LKDDV+ KRWLTQLLFNI+E +Q
Sbjct:   40 LVAELTNPEQRESALLELSKRRETFVDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGTLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPEPLRDATFSGCLKDDVTTKRWLTQLLFNISESAQ 303          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A7S3AUU1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AUU1_9EUKA)

HSP 1 Score: 445 bits (1145), Expect = 3.780e-156
Identity = 226/261 (86.59%), Postives = 238/261 (91.19%), Query Frame = 0
Query:   10 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITE 270
            LVL+LTNPDQRE ALLELSK+RE F DLAPILWHSFGT+SALLQEIVAIYPLL+PP+LT  ASNRVCNALALLQCVASHPETR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD+DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YICATAERFYAVSTVLGN+V  LVE PS RLLKH+VRCYLRLSDN RAREALRQCLPDALRD TF   LKDDV  KRWLTQLLFNI +
Sbjct:   29 LVLELTNPDQRESALLELSKRRETFADLAPILWHSFGTVSALLQEIVAIYPLLAPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDALRDATFQGCLKDDVITKRWLTQLLFNIND 289          
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Match: A0A0M0K0H5_9EUKA (Cell differentiation protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0H5_9EUKA)

HSP 1 Score: 445 bits (1145), Expect = 3.780e-156
Identity = 230/274 (83.94%), Postives = 244/274 (89.05%), Query Frame = 0
Query:    4 NAEDT----ALVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISALLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNVLKDDVSVKRWLTQLLFNITEESQ 273
            NAE+T     LVL+LTNPDQRE ALLELSK+RE F DLAPILWHSFGT+SALLQEIVAIYPLLSPP LT  ASNRVCNALALLQCVASHP+TR LFL AHIPL+LYPFLNTVSK RPFEYLRLTSLGVIGALVK+DD+DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQKILLD+ GL YICATAERFYAVSTVL N+V  LVE PS RLLKH+VRC+LRLSDN RAREALRQCLPDALRD TF+  LKDDV+ KRW TQLLFNITE  Q
Sbjct:   17 NAEETDKIFVLVLELTNPDQRETALLELSKRRETFPDLAPILWHSFGTVSALLQEIVAIYPLLSPPALTAQASNRVCNALALLQCVASHPDTRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLANLVGALVEQPSGRLLKHIVRCFLRLSDNARAREALRQCLPDALRDATFSACLKDDVTTKRWHTQLLFNITESVQ 290          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4966.12159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUJ5_9PHAE3.240e-17894.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW54_ECTSI2.440e-17794.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CJ98_9STRA6.260e-16791.95Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V242_9STRA7.340e-16390.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2S6Y0_9STRA1.950e-16188.97Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
F0Y9A1_AURAN3.490e-15784.59Uncharacterized protein n=3 Tax=Pelagomonadales Ta... [more]
R1C1A7_EMIHU3.860e-15785.98Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S0DZ44_9EUKA2.030e-15685.61Hypothetical protein n=3 Tax=Prymnesiophyceae TaxI... [more]
A0A7S3AUU1_9EUKA3.780e-15686.59Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0K0H5_9EUKA3.780e-15683.94Cell differentiation protein n=1 Tax=Chrysochromul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF04078Rcd1coord: 10..268
e-value: 2.7E-130
score: 433.3
NoneNo IPR availablePANTHERPTHR12262UNCHARACTERIZEDcoord: 5..272
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..270
e-value: 1.6E-135
score: 452.2
IPR007216CCR4-NOT transcription complex subunit 9PANTHERPTHR12262:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 9coord: 5..272
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 71..269

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4966contigH-paniculata_contig4966:2988..3812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4966.12159.1mRNA_H-paniculata_contig4966.12159.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4966 1848..9258 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4966.12159.1 ID=prot_H-paniculata_contig4966.12159.1|Name=mRNA_H-paniculata_contig4966.12159.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MERNAEDTALVLQLTNPDQREGALLELSKKREAFTDLAPILWHSFGTISA
LLQEIVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHI
PLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVINFLLQTEIIP
LCLRIMETGSELSKTVATFIVQKILLDDMGLTYICATAERFYAVSTVLGN
MVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRDNTFTNV
LKDDVSVKRWLTQLLFNITEESQT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR007216CNOT9
IPR016024ARM-type_fold