prot_H-paniculata_contig4961.12154.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4961.12154.1
Unique Nameprot_H-paniculata_contig4961.12154.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A151S498_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151S498_CAJCA)

HSP 1 Score: 63.9 bits (154), Expect = 1.850e-10
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    7 RRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDE 49
            R KLD K++VGVFLGY+ +S  YRIYNP +K + +SRNV+FDE
Sbjct:   57 RDKLDQKSKVGVFLGYNNNSKGYRIYNPTSKKILVSRNVKFDE 99          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: UPI00098D91DB (uncharacterized protein LOC109813272 n=1 Tax=Cajanus cajan TaxID=3821 RepID=UPI00098D91DB)

HSP 1 Score: 63.9 bits (154), Expect = 1.890e-10
Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    7 RRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDE 49
            R KLD K++VGVFLGY+ +S  YRIYNP +K + +SRNV+FDE
Sbjct:  103 RDKLDQKSKVGVFLGYNNNSKGYRIYNPTSKKILVSRNVKFDE 145          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A7S1T3E5_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T3E5_9CHLO)

HSP 1 Score: 57.8 bits (138), Expect = 2.490e-9
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    6 QRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDVVT 54
            QRRKLDD+A  GVF+GY  +SP++ +YNP  +    SRNV FDE  V++
Sbjct:   48 QRRKLDDRAWKGVFVGYASESPAWLVYNPVTRRAVSSRNVVFDEAAVLS 96          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A371GUU3_MUCPR (Uncharacterized protein (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371GUU3_MUCPR)

HSP 1 Score: 56.6 bits (135), Expect = 4.560e-9
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    4 SQQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDV 52
            +Q R KL D++   VF+GYD +S  Y++YNP N  + +S++V FDEEDV
Sbjct:   39 NQGRSKLHDRSMKIVFIGYDANSKGYKLYNPNNGKIIISKDVEFDEEDV 87          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A1R3HQR7_COCAP (Integrase catalytic domain-containing protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3HQR7_COCAP)

HSP 1 Score: 60.1 bits (144), Expect = 4.840e-9
Identity = 26/48 (54.17%), Postives = 35/48 (72.92%), Query Frame = 0
Query:    7 RRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDVVT 54
            R KLD+KA++GVF+GY  +   YRIYNP    V LSR+V+FDE  V++
Sbjct:  475 RGKLDEKAQIGVFVGYSIEVKGYRIYNPTTNKVYLSRDVKFDENAVLS 522          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A329R541_9STRA (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329R541_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 6.040e-9
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    5 QQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDVVTGHRGQL 60
            ++R K D KAR G+FLGY+E S +YR+Y+ E   V +SR+V FDE  +V+  R Q+
Sbjct:  115 EKRLKWDPKARAGLFLGYEEVSKAYRLYDIEAGQVVISRDVTFDESSLVSQRRAQV 170          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A6H5FV69_9HEMI (Uncharacterized protein n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FV69_9HEMI)

HSP 1 Score: 59.7 bits (143), Expect = 6.620e-9
Identity = 27/48 (56.25%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    4 SQQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEED 51
            S +RRKLD +A V +FLGY  +S +YR+YNP N+ V LSR+VRF E +
Sbjct:  218 SDRRRKLDKRATVCIFLGYSLESKAYRLYNPANRRVFLSRDVRFSESE 265          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: UPI0009047AD4 (uncharacterized protein LOC109237395 n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=UPI0009047AD4)

HSP 1 Score: 59.3 bits (142), Expect = 8.100e-9
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    5 QQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDV 52
            ++R KLDDK+   VF+GYD+ S  Y++YNP+N  V +SR+V FDE++ 
Sbjct:  182 EKRSKLDDKSERYVFIGYDQSSKGYKLYNPKNGKVTISRDVEFDEDNA 229          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA)

HSP 1 Score: 59.3 bits (142), Expect = 8.900e-9
Identity = 23/47 (48.94%), Postives = 36/47 (76.60%), Query Frame = 0
Query:    5 QQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEED 51
            ++R KLDDK+   +F+GYD +S  Y++YNP N+ + +SR+V FDEE+
Sbjct:  116 ERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEE 162          
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Match: A0A314LHB3_NICAT (Putative mitochondrial protein n=1 Tax=Nicotiana attenuata TaxID=49451 RepID=A0A314LHB3_NICAT)

HSP 1 Score: 59.3 bits (142), Expect = 8.920e-9
Identity = 24/48 (50.00%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    5 QQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEEDV 52
            ++R KLDDK+   VF+GYD+ S  Y++YNP+N  V +SR+V FDE++ 
Sbjct:  100 EKRSKLDDKSERYVFIGYDQSSKGYKLYNPKNGKVTISRDVEFDEDNA 147          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4961.12154.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A151S498_CAJCA1.850e-1062.79Retrovirus-related Pol polyprotein from transposon... [more]
UPI00098D91DB1.890e-1062.79uncharacterized protein LOC109813272 n=1 Tax=Cajan... [more]
A0A7S1T3E5_9CHLO2.490e-953.06Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A371GUU3_MUCPR4.560e-948.98Uncharacterized protein (Fragment) n=1 Tax=Mucuna ... [more]
A0A1R3HQR7_COCAP4.840e-954.17Integrase catalytic domain-containing protein n=1 ... [more]
A0A329R541_9STRA6.040e-948.21Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5FV69_9HEMI6.620e-956.25Uncharacterized protein n=2 Tax=Nesidiocoris tenui... [more]
UPI0009047AD48.100e-950.00uncharacterized protein LOC109237395 n=1 Tax=Nicot... [more]
A0A540MM95_MALBA8.900e-948.94Integrase catalytic domain-containing protein n=1 ... [more]
A0A314LHB3_NICAT8.920e-950.00Putative mitochondrial protein n=1 Tax=Nicotiana a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4961contigH-paniculata_contig4961:1558..1740 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4961.12154.1mRNA_H-paniculata_contig4961.12154.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4961 1558..2355 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4961.12154.1 ID=prot_H-paniculata_contig4961.12154.1|Name=mRNA_H-paniculata_contig4961.12154.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
MFQSQQRRKLDDKARVGVFLGYDEDSPSYRIYNPENKSVQLSRNVRFDEE
DVVTGHRGQLE
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