mRNA_H-paniculata_contig496.12151.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig496.12151.1
Unique NamemRNA_H-paniculata_contig496.12151.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: D7FUZ5_ECTSI (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ5_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 4.750e-67
Identity = 115/146 (78.77%), Postives = 128/146 (87.67%), Query Frame = 1
Query:   16 MLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            MLDI++RC+  DR +GGAG+ RV RIDG  SDLERQ TI  FN +  I VCLVSTGAGGTGITLTGADRV+L DPSWNPADDMQAVDRAYRIGQ +DV+VYRMIAAGTVEEKMYEKQ+FKDGLRRT+MGG+ KRKK+VRYFSR EL
Sbjct:    1 MLDILERCINEDRGKGGAGL-RVCRIDGGHSDLERQHTIARFNANNKISVCLVSTGAGGTGITLTGADRVILSDPSWNPADDMQAVDRAYRIGQKRDVIVYRMIAAGTVEEKMYEKQIFKDGLRRTVMGGTVKRKKNVRYFSRSEL 145          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A6H5KIE9_9PHAE (Helicase C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE9_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 4.200e-62
Identity = 99/123 (80.49%), Postives = 108/123 (87.80%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQV 369
            SRF+RMLDI++RC+  DR EGGAG+ RV RIDG  SDLERQ TI  FN +  I VCLVSTGAGGTGITLTGADRV+LFDPSWNPADDMQAVDRAYRIGQ +DV+VYRMIAAGTVEEKMYEKQV
Sbjct:   58 SRFVRMLDILERCINDDRGEGGAGL-RVCRIDGGHSDLERQHTIARFNANNKISVCLVSTGAGGTGITLTGADRVILFDPSWNPADDMQAVDRAYRIGQKRDVIVYRMIAAGTVEEKMYEKQV 179          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A836CB04_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB04_9STRA)

HSP 1 Score: 176 bits (446), Expect = 3.040e-48
Identity = 93/153 (60.78%), Postives = 113/153 (73.86%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMG--GSDKRKKSVRYFSRKEL 453
            S+ +R+LD++QRCLE+          R  RIDGSSSD++R + I SFN    + VCL+ST  GG GITLTGA+RVV++DPSWNPA+D QAVDRA+RIGQT+DVVVYRMI AGTVEEKMYEKQ+FKDGLR T++   G   R      FSR EL
Sbjct:  600 SQSVRVLDMLQRCLES-------AAMRFVRIDGSSSDMDRARCISSFNADASLAVCLLSTKVGGYGITLTGANRVVVYDPSWNPAEDRQAVDRAFRIGQTRDVVVYRMITAGTVEEKMYEKQIFKDGLRHTVLDNKGGSARGWGAGLFSRAEL 745          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A7S3Y346_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y346_HETAK)

HSP 1 Score: 158 bits (399), Expect = 3.770e-46
Identity = 89/152 (58.55%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCL-EADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            S+ +RMLDII+ C  E D      G+  + RIDGS SD+ERQ  I  FN        L+ST  GG GITLTGA RVV++DPSWNPA+D QAVDRA+RIGQ K+V+VYRMI +GTVEEKMYEKQV+KDGLRRT++      K   RYFS  +L
Sbjct:   37 SQSVRMLDIIEECFKETD------GLKSL-RIDGSHSDVERQYQIDLFNSDERYKAFLLSTKVGGFGITLTGASRVVIYDPSWNPAEDSQAVDRAFRIGQQKNVIVYRMITSGTVEEKMYEKQVYKDGLRRTVVEA----KNQQRYFSSNDL 177          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A7S0CH49_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CH49_9STRA)

HSP 1 Score: 151 bits (381), Expect = 6.250e-40
Identity = 83/152 (54.61%), Postives = 107/152 (70.39%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNG-STDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            S+  RMLDII+R L            ++ RIDGS+ +  RQ+ +  FN  ++DI   ++ST A G GITLTGADR +++DPSWNPADD QAVDR YRIGQTK V VYR+IAAGTVEE+MYEKQV KDGL+ T++  S+  + + RYF + EL
Sbjct:  293 SQSTRMLDIIERVLSP---------RKLLRIDGSTKEKNRQKNVDKFNEKNSDIVAMILSTKAAGLGITLTGADRAIVYDPSWNPADDAQAVDRCYRIGQTKSVTVYRLIAAGTVEERMYEKQVHKDGLKHTVL--SNDGRTTRRYFDKTEL 433          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A1Z5KQS8_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQS8_FISSO)

HSP 1 Score: 149 bits (376), Expect = 7.930e-39
Identity = 85/152 (55.92%), Postives = 108/152 (71.05%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIP-VCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            S+  +ML+IIQR L      G   +S VSRIDG + +  RQQ +  FN    +  V L+ST AGG GITLTGADRV+LFDPSWNP++D QA+ RAYRIGQT++V V+RMI AGTVEEKMYE+Q++KDG+RR ++   D+     RYF R EL
Sbjct:  541 SQSTKMLNIIQRALL-----GKLHLS-VSRIDGDTKESVRQQLVDDFNNPKSLQKVFLLSTKAGGVGITLTGADRVILFDPSWNPSEDDQAIGRAYRIGQTREVTVFRMITAGTVEEKMYERQLYKDGIRRVVLTIGDE---VQRYFERSEL 683          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A7S1IQI0_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IQI0_9EUGL)

HSP 1 Score: 148 bits (374), Expect = 1.480e-38
Identity = 82/152 (53.95%), Postives = 103/152 (67.76%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGS-SSDLERQQTIKSFNGSTDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            SR ++MLDI+Q  LE           R SR+DGS     ERQQ +  FN +  I  CL+++  GG G+TLTGADRV++ DPSWNPA+D QAVDRA+RIGQT+DVVVYR+I  GTVEEKMY +QVFK GL    MG  D     +R+F++ EL
Sbjct:  748 SRSVKMLDIVQMWLERQDM-------RHSRLDGSVKQPAERQQIVDRFNANPKIFCCLLTSQVGGVGLTLTGADRVLILDPSWNPANDNQAVDRAFRIGQTRDVVVYRLITCGTVEEKMYRRQVFKQGLALQAMGTDD----VIRHFTKMEL 888          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A7S2E6H2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E6H2_9STRA)

HSP 1 Score: 146 bits (369), Expect = 7.010e-38
Identity = 83/154 (53.90%), Postives = 100/154 (64.94%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGS-TDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIM--GGSDKRKKSVRYFSRKEL 453
            S+   MLDIIQ  LE              RIDG + +  RQ     FN   +D+ V L+ST A G G+TLTGADR +++DPSWNPADD QAVDR YRIGQT+ V VYR IAAGTVEE+MYEKQV KDG+RR ++  GGS     + RYF + EL
Sbjct:  740 SQSTMMLDIIQTVLEP---------LEFRRIDGQTKERSRQSAADEFNAQGSDVDVMLLSTKAAGLGLTLTGADRAIIYDPSWNPADDSQAVDRCYRIGQTRSVTVYRFIAAGTVEERMYEKQVLKDGIRRAVLTSGGSA----TERYFDKNEL 880          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A448YWS6_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YWS6_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.440e-37
Identity = 76/152 (50.00%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 SRFIRMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGS-TDIPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            S+  ++LDII+R L+           ++ RIDGS+ + +RQ+ +  FN S +DI + L+ST AGG G+TLTGAD  +++DPSWNPA+D QAVDR YR+GQ K+V V+R+I AGTVEEK YEKQ+ KDG+RRTI+  +     + +YF+++EL
Sbjct:  392 SQSTKVLDIIERVLKYK--------FKLLRIDGSTKEKDRQKYVDEFNESGSDIDIMLISTKAGGQGLTLTGADSCIVYDPSWNPAEDAQAVDRCYRLGQKKEVQVFRLITAGTVEEKRYEKQIHKDGIRRTILTNTGNN--TAKYFTKEEL 533          
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Match: A0A7S3Q775_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q775_9STRA)

HSP 1 Score: 138 bits (347), Expect = 9.450e-37
Identity = 77/148 (52.03%), Postives = 99/148 (66.89%), Query Frame = 1
Query:   13 RMLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTD-IPVCLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVVYRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL 453
            ++LDII++ L+   + G        RIDGS +  +RQ  +  FN   +     L+ST AGG G+TLTGADR +LF PSWNPADD QAVDR YRIGQ K+V VYR I AGTVEE+MYEKQV KDG+RRT++  S     + R+F+  +L
Sbjct:  101 KILDIIEKVLDTKINMG--------RIDGSVNGKQRQVIVDQFNDDEEKYDALLISTKAGGVGLTLTGADRAILFSPSWNPADDNQAVDRCYRIGQRKNVTVYRFITAGTVEERMYEKQVHKDGIRRTLVTSSGSA--TERHFTSDDL 238          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig496.12151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUZ5_ECTSI4.750e-6778.77Helicase C-terminal domain-containing protein n=1 ... [more]
A0A6H5KIE9_9PHAE4.200e-6280.49Helicase C-terminal domain-containing protein n=1 ... [more]
A0A836CB04_9STRA3.040e-4860.78P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S3Y346_HETAK3.770e-4658.55Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S0CH49_9STRA6.250e-4054.61Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A1Z5KQS8_FISSO7.930e-3955.92Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S1IQI0_9EUGL1.480e-3853.95Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S2E6H2_9STRA7.010e-3853.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448YWS6_9STRA2.440e-3750.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3Q775_9STRA9.450e-3752.03Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig496contigH-paniculata_contig496:27277..30153 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score229.9
Seed ortholog evalue7.4e-58
Seed eggNOG ortholog2880.D7FUZ5
Preferred nameJBP2
KEGG koko:K10841,ko:K20098,ko:K22407
KEGG Pathwayko03420,map03420
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0001932,GO:0001934,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006284,GO:0006289,GO:0006351,GO:0006355,GO:0006366,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0008022,GO:0008023,GO:0008047,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010562,GO:0010604,GO:0010628,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019207,GO:0019209,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019887,GO:0019899,GO:0030234,GO:0030295,GO:0030296,GO:0030554,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032147,GO:0032268,GO:0032270,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032784,GO:0032786,GO:0032991,GO:0033554,GO:0033674,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0040029,GO:0042325,GO:0042327,GO:0042623,GO:0043085,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043549,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044877,GO:0045815,GO:0045859,GO:0045860,GO:0045893,GO:0045935,GO:0045937,GO:0046483,GO:0047485,GO:0048518,GO:0048522,GO:0050730,GO:0050731,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051338,GO:0051347,GO:0051716,GO:0060255,GO:0061097,GO:0061098,GO:0065007,GO:0065009,GO:0070013,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0098772,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141
EggNOG free text desc.histone H2A-H2B dimer displacement
EggNOG OGsCOG0553@1,KOG0387@2759
EC1.14.11.6,3.6.4.12
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036,ko03400
Exons4
Model size454
Cds size438
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig496.12151.1prot_H-paniculata_contig496.12151.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig496 27292..30153 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930461.8294861-UTR-H-paniculata_contig496:27276..272911622930461.8294861-UTR-H-paniculata_contig496:27276..27291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig496 27277..27291 +
1691481302.3848507-UTR-H-paniculata_contig496:27276..272911691481302.3848507-UTR-H-paniculata_contig496:27276..27291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig496 27277..27291 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930461.8425848-CDS-H-paniculata_contig496:27291..274521622930461.8425848-CDS-H-paniculata_contig496:27291..27452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 27292..27452 +
1691481302.3956223-CDS-H-paniculata_contig496:27291..274521691481302.3956223-CDS-H-paniculata_contig496:27291..27452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 27292..27452 +
1622930461.8578324-CDS-H-paniculata_contig496:28002..281601622930461.8578324-CDS-H-paniculata_contig496:28002..28160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 28003..28160 +
1691481302.4075818-CDS-H-paniculata_contig496:28002..281601691481302.4075818-CDS-H-paniculata_contig496:28002..28160Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 28003..28160 +
1622930461.8691504-CDS-H-paniculata_contig496:29190..292221622930461.8691504-CDS-H-paniculata_contig496:29190..29222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 29191..29222 +
1691481302.4178395-CDS-H-paniculata_contig496:29190..292221691481302.4178395-CDS-H-paniculata_contig496:29190..29222Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 29191..29222 +
1622930461.8808613-CDS-H-paniculata_contig496:30066..301531622930461.8808613-CDS-H-paniculata_contig496:30066..30153Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 30067..30153 +
1691481302.4263465-CDS-H-paniculata_contig496:30066..301531691481302.4263465-CDS-H-paniculata_contig496:30066..30153Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig496 30067..30153 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig496.12151.1

>prot_H-paniculata_contig496.12151.1 ID=prot_H-paniculata_contig496.12151.1|Name=mRNA_H-paniculata_contig496.12151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MLDIIQRCLEADRSEGGAGVSRVSRIDGSSSDLERQQTIKSFNGSTDIPV
CLVSTGAGGTGITLTGADRVVLFDPSWNPADDMQAVDRAYRIGQTKDVVV
YRMIAAGTVEEKMYEKQVFKDGLRRTIMGGSDKRKKSVRYFSRKEL
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mRNA from alignment at H-paniculata_contig496:27277..30153+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig496.12151.1 ID=mRNA_H-paniculata_contig496.12151.1|Name=mRNA_H-paniculata_contig496.12151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2877bp|location=Sequence derived from alignment at H-paniculata_contig496:27277..30153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCCGCTTCATCCGCATGTTGGACATCATTCAGAGGTGCCTGGAGGCAGA CAGGAGCGAGGGCGGGGCAGGTGTGTCGCGTGTGTCGCGCATCGACGGAA GTAGCAGTGATCTGGAGCGACAGCAGACGATCAAGAGCTTCAACGGTAGC ACGGACATTCCTGTGTGCCTCGTTAGGTAAATTACAGCCAGTACCAGGAT TTATGCATGCCTCGTGAGGTACCCTGTAGTACAGTACAGTGCGGCCGATG GCCTACTTTGTGTTTAACCGTTTGCGCGACAGGGTGGTGAATAGGCATTT GCGATCTTCTTTCTACGGTAGAACTGATGTAACTGAAATTGATACCGATG TAATGCCCCAAATCAGCCTACCATCAATACTTGCTGCAAGGGTTGCGGAC CTCGTTTGGGAACTCAATATTCAATTTTTCATAAAAAACATATTCTACGG TTATCAGATACTCCGTATGACCTGTTAGTCATTGACCAAACGAAGATCGT CTCCATCATGTCCTTGCGTATGCCGTTCTCAATACGATGAAAGCGGTAAT CTTTTCCTTGGTGTGCCTTTTGTTTTCGTTTTTTTTGTTTTTTTGTTTTT TTGTCATTTTTCGTTTATTTTCAAAACCGACGCACATTTTTTTGTACGAG TACGGTGGTTAGGTCATTTTCCAGTTTTTTCACCGTTCAAATGTACTTTC CCACGTGCCCCCATCTTCGGATACAGTACGGGTGCCGGGGGTACGGGCAT CACCTTGACGGGTGCGGACCGTGTGGTTCTGTTTGACCCGTCTTGGAACC CGGCGGATGACATGCAGGCGGTGGACCGCGCCTATCGCATAGGACAAACG AAAGACGTGGTTGTGTATCGCATGATCGCGGCAGGTGCGTCGTGTTCGAG TTAGTCAATTGACTTTTGCCGTCTGCCTCCACAAAGTTCCAGTCACAGGG CTTCTACGGCATATGATACTTGCAGTACATGTCTACGGCACGCCTTGGTA TATACGGTACTTTTAGTATAAATAGAAAGCGCGTTTGTGTATTTGATTGG TTGGTTGGTTTGGTTGAGTGTGGGTTAGGTTGTTTGTTTGGTCTTTTGGT TTGGCTTATTTTCTTTGTTTTATTTGTGGCAGAAAATAAAGATGCGTACT CGGGGGGATCTTCAGAACAATTTTTGTCCATTTTTTGAGCTCTGCAAATT CATAACTTCACGGTTTCGAACTTTTTGTATATTGGCAAATCTGTTTTTTC ATGTCTTGATTGACGTGAGTTAAAGCCTAAATTCTCCAAGTCTGCGAATC GTCGGAAGGTTGCACGTAGAGCTTTACACGTTACGCTACTTCATGACCAA GATAATACTGCTTCATCACATGTTTGCCCAATGGTTGTTCAGGAGAAGGT TTTCACGGTTAGGACCGACCAGCTCGTTCACAGCTCGTATCACTCCTTTT GCACGGACAGGTAAATCGTGAAATCGGTACACCGTTGTGACCTGTACATG GTTTCGACTTCTGCGGCACCCCTAGCGGTCATTGGCACATAGTTTCCGTC TCTGACCGTTGACCCACCGATCTTTAGCAAACGTTTGTCCAAGACTAATC CATACAAGCCCACTCGTACCAGTATTGATCGGTTCGATGTGTGGAAGGCT TCCAATTCTATACGCAAGTAACTTCCAAAGCTTCTCACGCACATCGCGCC TACCTGCAAGCGCGTGGAGTCGTTGTACGTGGGTTATGGGTAAGTGGGCA AGAGAATTAGGTACCGATCCCACAAGCACAGGTATGGCTGTACTGCTAAT GATAAGAGCAGGGGGGGGGAATAAGGCCTCCTTTTCACACGTCCTCCGTG CGCTGTGTTTTATATTTCTTCCATACCTTCCCAAACTGTGCTCGCGTGTT GATTCGGGGGCAAGGCACGGTGGAAGAGAAGATGTACGAGAAGCAGGTAC GACAATGAATGCAGTACAATTCATAAGGTCCCATTTTCTTGTCGTTTTTT GTCGTTGCTTTTTGTGTATCGTTCTTCCCTTCTAGTCTCGTTTTGCGGCA CATCGTTTATCCATGGTAAGATACATGTACATGTGTATATACATAAACTT CAGCGACCTCAGCAACCTGAAATCGGGTGAAACTCTCGTCCTGTTTTTTT TTGTCAGATTTCGCTAGATTTAGATAAAAAAAAGATTGAATAAACCAAGT GATTACTATTCAGTTCAACGTCCGACAGAAGTAGAAAGGCCCAGCTAACG TGCAAATACTGTGTATCCGATTTTACTGTTCATTTTTTCATTTTTTTCTG GGGAGGGGGGGATACACCTAGGCTCACCTCACCTATATAAATATCTTGTG TGCCTTTGTGATGTTCAGTCTTGGATATTGTCTGCTACAAGGGGTAGGAT GGCAAATTTGTATTTGGCAAGTCGGAACAATGAACAATCTCGAAGTGGAC CGTTCACTAGTAGCAGTGTGCGGTTGGATTGCTTTTCATTTTGGCTGCGT CGCTTTTGTTTCATTGGCAGTAGCCCGATAGAGATACTATAGCATGAGTG CCTTTTATTGTCACCCTAGAAGGAAATACAAAGGTCTGTAAAAAAGGTAC GGCTGTGGTGCTTTTTTCCATGGCGGAGTGGTTGTCGTGTTTAACCACCA GTGAGCATGTACTGTTACGACTTTCACGTTTGTCTCTTGGCTTGTTTCGG CTAACGAGGGTGGTCTTCCATGACGGTCTGAACAACACGATCGGACTGCG TCACTTTTCATACTGAGGCTTACAAAAAACAAACAAACAGGTTTTCAAGG ACGGCCTACGCCGAACGATCATGGGGGGAAGCGACAAAAGGAAGAAAAGC GTCCGCTACTTTTCAAGGAAAGAGTTG
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Coding sequence (CDS) from alignment at H-paniculata_contig496:27277..30153+

>mRNA_H-paniculata_contig496.12151.1 ID=mRNA_H-paniculata_contig496.12151.1|Name=mRNA_H-paniculata_contig496.12151.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig496:27277..30153+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTGGACATCATTCAGAGGTGCCTGGAGGCAGACAGGAGCGAGGGCGG
GGCAGGTGTGTCGCGTGTGTCGCGCATCGACGGAAGTAGCAGTGATCTGG
AGCGACAGCAGACGATCAAGAGCTTCAACGGTAGCACGGACATTCCTGTG
TGCCTCGTTAGATGTTGGACATCATTCAGAGGTGCCTGGAGGCAGACAGG
AGCGAGGGCGGGGCAGGTGTGTCGCGTGTGTCGCGCATCGACGGAAGTAG
CAGTGATCTGGAGCGACAGCAGACGATCAAGAGCTTCAACGGTAGCACGG
ACATTCCTGTGTGCCTCGTTAGTACGGGTGCCGGGGGTACGGGCATCACC
TTGACGGGTGCGGACCGTGTGGTTCTGTTTGACCCGTCTTGGAACCCGGC
GGATGACATGCAGGCGGTGGACCGCGCCTATCGCATAGGACAAACGAAAG
ACGTGGTTGTGTATCGCATGATCGCGGCAGTACGGGTGCCGGGGGTACGG
GCATCACCTTGACGGGTGCGGACCGTGTGGTTCTGTTTGACCCGTCTTGG
AACCCGGCGGATGACATGCAGGCGGTGGACCGCGCCTATCGCATAGGACA
AACGAAAGACGTGGTTGTGTATCGCATGATCGCGGCAGGCACGGTGGAAG
AGAAGATGTACGAGAAGCAGGCACGGTGGAAGAGAAGATGTACGAGAAGC
AGGTTTTCAAGGACGGCCTACGCCGAACGATCATGGGGGGAAGCGACAAA
AGGAAGAAAAGCGTCCGCTACTTTTCAAGGAAAGAGTTGGTTTTCAAGGA
CGGCCTACGCCGAACGATCATGGGGGGAAGCGACAAAAGGAAGAAAAGCG
TCCGCTACTTTTCAAGGAAAGAGTTG
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