mRNA_H-paniculata_contig119.1214.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig119.1214.1 vs. uniprot
Match: D7FR35_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR35_ECTSI) HSP 1 Score: 475 bits (1223), Expect = 6.350e-149 Identity = 250/388 (64.43%), Postives = 310/388 (79.90%), Query Frame = 1 Query: 1 TGMADNLGFINRLLAASTRGVESIESTAEGIRGMVNLAQEELAKRRHERVETLLADALALSADIDDPVTQGIVLISCGMYSAGQGMIEEAEEDFASAFELFAPAGDTSRCGEVMIESAYAKLCIGDTEEALFMFREVRDVAVANKDDFLSQASLHGAALVHAITGNLRQASAILAQLRCLVEDDWARRRGKRGRTAAATEGTSQSSLVVMEALEAYIAAARGDGHSALRAVSRSSLRLSRSTPLRFSSGLFLQLAADACFVILEYGMLPSGLEPRRKIVRAAQMLMQTLARFAEVFDLMVPLYQLGRARWNFLLARDEAAEMSLESGLLTSEEHFNFPYAEGLLLLHSTRLQCLPLRERKARARRGRSMLARMRARLIPSDDLDREEG 1164 TGM NL FINRL+ STR V+ ++ T EGIR ++NLA EELAK H++ E+LL ALALS DI DP+T+GI LI+ G Y+AG+G++ EAEE FA AFE+FAPAGD SRCGEV++ SAYAKLC GDT EAL MF EVRD A+++ DD+LSQASLHGAALVHAITGN+ +ASA LA++R +VE+DWARRRG+RGRTAAATEGTS +SLVVME L AY+AA+RGDG +AL+ V R+SLRLSR+ LRFSSGLFL LA DACF ILE MLP G + R+++ AA++L++TL RFA++FDLM PL+QLGRARW+ L D+ AE +L GL SEE +FP+AEGLLLLHSTR++ LP+ ER+ARARRGR L R+ A LIP D R++G Sbjct: 1888 TGMGGNLSFINRLVKVSTRKVDFVDKTQEGIRLLLNLAHEELAKGHHDKTESLLDRALALSIDIGDPITRGIALIASGTYNAGEGLVTEAEEHFAEAFEMFAPAGDYSRCGEVVVGSAYAKLCSGDTPEALSMFNEVRDTAISHNDDYLSQASLHGAALVHAITGNMAEASAGLAKMRSIVEEDWARRRGRRGRTAAATEGTSHASLVVMETLGAYLAASRGDGKAALKGVCRASLRLSRAGALRFSSGLFLHLATDACFTILEQDMLPPGPDSYRRVIAAARLLIRTLGRFAQMFDLMSPLHQLGRARWSMLHGMDKVAEKALVLGLEISEEDVHFPFAEGLLLLHSTRIESLPMDERRARARRGRRTLHRIGACLIPPADRTRKKG 2275 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig119.1214.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig119.1214.1 >prot_H-paniculata_contig119.1214.1 ID=prot_H-paniculata_contig119.1214.1|Name=mRNA_H-paniculata_contig119.1214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp MADNLGFINRLLAASTRGVESIESTAEGIRGMVNLAQEELAKRRHERVETback to top mRNA from alignment at H-paniculata_contig119:33143..39954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig119.1214.1 ID=mRNA_H-paniculata_contig119.1214.1|Name=mRNA_H-paniculata_contig119.1214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6812bp|location=Sequence derived from alignment at H-paniculata_contig119:33143..39954+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig119:33143..39954+ >mRNA_H-paniculata_contig119.1214.1 ID=mRNA_H-paniculata_contig119.1214.1|Name=mRNA_H-paniculata_contig119.1214.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig119:33143..39954+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |