mRNA_H-paniculata_contig4956.12147.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4956.12147.1
Unique NamemRNA_H-paniculata_contig4956.12147.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4956.12147.1 vs. uniprot
Match: A0A6H5K714_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 6.180e-93
Identity = 306/742 (41.24%), Postives = 361/742 (48.65%), Query Frame = 1 
Query:    1 ILPVTYASLKQSDAVGALKSLKKHTDQSVRKMSKAVISHWKTALVGDGAEIGKHREKLDELHDKLKETQEAEKAXXXXXXXXXXARRDAMRGRL-PINGTG-PPVSAPPPPVLYTRASSANSINSSVDSD--------ATSTPSKVSGPKMGTSEIDPSATAXXXXXXXXXXXXXXXXXXPGGGTNTTSESTPKNGGTAPDQSAASIATGATGAVGPGVASGPGRFFVGRKFPGRGARGRMGTLAAAGRGNNAGSPGPRKGKPPANAGAMRGGAAVAGKPGAAAVATGASVPGAPVATPSVGILKTSA--SAATAAGSSSTSSQGLTGSLDGGILSLGLVGAADVGAVGGIGGTGVGSGNAGDPMVVEGAAEGSASXXXXXXXXXXXXXXXXXXXXPIVSMEDLTRADALAKKKQRKAKRLEPAAKKVSWADRAGRVLHAIKEFHSEDSPRTVSDPTSSPDADGQSADNLSLHHAGHSHWAERVKREREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-------RKAMKPTVAWRRPGPYEDGVVHEDVIALEVESSEAESQGARTRAGLEQVYLSSGDIPPSPAEPDASSFIPTGDVSMYKIPFFMESELEQALQEXXXXXXXXXXXXXAP-PVKVGVTLEQMQALEAALATVDQHAANALRGRFSQEPRLLTSLIGVNNQINVPLLRSLAQQALSTPLNVHLSIPV-------LPMPAAAPPQ 2145
            +LPVTY+SL QSDA  ALK+L KH D  +RK +KAVISHW+TALV D  EI KHR++LD+LHDKLK  Q+AEK            RRD  R +  P NG G  P++APPP                            A    S  S P       DP A A                    G   T S                      TGA       G  R+FVGRK  GRG  GR+     A  G  AG  G  KG               AG                        ILK +A  +AATA G   T++ G                                +  A  P     A  GS                      PIVS++++ RA++  KK+ RKAK   PA KKV WADRAGR L  +KEFHSED+   VS+     ++D   A  ++ HHAGH HWAERVKREREM                           XXXXXXXXXXXXXXXX        RK M   V WRRPGPYE GVVHEDV+ LEVESSEAESQGARTRAGLEQVYLSSGDIP +PAEPDA+SF+P  +V MYKIPF+MESELEQ   E              P PVKV  TL+Q++AL+ ALA+VD HAA ALR RF+ EPRLL++L+    ++N  LLRS++QQALSTP NVHL++P         P  A  PPQ
Sbjct:  229 VLPVTYSSLMQSDAGKALKALNKHADSDIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGR-----DPPAAAADSS----------------GAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQ-GTGKGDRGXXXXXXXXXXXXAGXXXXXXXXXX--------------ILKVTAVSTAATAGGQDGTAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTA-ASAPAASRSAGIGSGPP-------------------PIVSLDEMARAESEEKKRLRKAK---PAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQ--ESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKGKSDHGRASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKRKPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEALKEQQQQQAPANQPGPVKV--TLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPTLQASPSYAPGPPQ 907
[Close]
BLAST of mRNA_H-paniculata_contig4956.12147.1 vs. uniprot
Match: D8LNV8_ECTSI (TFIIS N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 2.520e-71
Identity = 192/337 (56.97%), Postives = 226/337 (67.06%), Query Frame = 1 
Query: 1153 PIVSMEDLTRADALAKKKQRKAKRLEPAAKKVSWADRAGRVLH---------------------AIKEFHSEDSPRTVSDPTSSPDADGQSADNLSLHHAGHSHWAERVKREREMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------RKAMKPTVAWRRPGPYEDGVVHEDVIALEVESSEAESQGARTRAGLEQVYLSSGDIPPSPAEPDASSFIPTGDVSMYKIPFFMESELEQALQEXXXXXXXXXXXXXAP-PVKVGVTLEQMQALEAALATVDQHAANALRGRFSQEPRLLTSLIGVNNQINVPLLRSLAQ 2070
            PIVS++++ RA++  KK+ RKAK   PA KKV WADRAGR L                       +KEFHSED+   VS+     ++D  +A  ++ HHAGH HWAERVKREREM             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          RK M  TV WRRPGPYE GVVHEDV+ LEVESSEAESQGARTRAGLEQVYLSSGDIP +PAEPDA+SF+P  +V MYKIPF+MESELEQ   E              P PVKV  TL+Q++AL+ ALA+VD HAA ALR RF+ EPRLL++L+    ++N  LLRS++Q
Sbjct:  337 PIVSLDEMARAESEEKKRLRKAK---PAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQ--ESDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKV--TLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 666
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4956.12147.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K714_9PHAE6.180e-9341.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNV8_ECTSI2.520e-7156.97TFIIS N-terminal domain-containing protein (Fragme... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4956contigH-paniculata_contig4956:5213..13875 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons7
Model size2862
Cds size2859
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930461.1777582-CDS-H-paniculata_contig4956:5213..60151622930461.1777582-CDS-H-paniculata_contig4956:5213..6015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 5214..6015 -
1691481302.1612618-CDS-H-paniculata_contig4956:5213..60151691481302.1612618-CDS-H-paniculata_contig4956:5213..6015Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 5214..6015 -
1622930461.2008855-CDS-H-paniculata_contig4956:6991..71431622930461.2008855-CDS-H-paniculata_contig4956:6991..7143Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 6992..7143 -
1691481302.1763523-CDS-H-paniculata_contig4956:6991..71431691481302.1763523-CDS-H-paniculata_contig4956:6991..7143Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 6992..7143 -
1622930461.2236054-CDS-H-paniculata_contig4956:9162..92871622930461.2236054-CDS-H-paniculata_contig4956:9162..9287Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 9163..9287 -
1691481302.1866007-CDS-H-paniculata_contig4956:9162..92871691481302.1866007-CDS-H-paniculata_contig4956:9162..9287Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 9163..9287 -
1622930461.243196-CDS-H-paniculata_contig4956:10050..101201622930461.243196-CDS-H-paniculata_contig4956:10050..10120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 10051..10120 -
1691481302.1958277-CDS-H-paniculata_contig4956:10050..101201691481302.1958277-CDS-H-paniculata_contig4956:10050..10120Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 10051..10120 -
1622930461.2662818-CDS-H-paniculata_contig4956:10585..120941622930461.2662818-CDS-H-paniculata_contig4956:10585..12094Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 10586..12094 -
1691481302.2050862-CDS-H-paniculata_contig4956:10585..120941691481302.2050862-CDS-H-paniculata_contig4956:10585..12094Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 10586..12094 -
1622930461.287743-CDS-H-paniculata_contig4956:13095..131611622930461.287743-CDS-H-paniculata_contig4956:13095..13161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 13096..13161 -
1691481302.2175803-CDS-H-paniculata_contig4956:13095..131611691481302.2175803-CDS-H-paniculata_contig4956:13095..13161Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 13096..13161 -
1622930461.3089664-CDS-H-paniculata_contig4956:13740..138751622930461.3089664-CDS-H-paniculata_contig4956:13740..13875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 13741..13875 -
1691481302.230041-CDS-H-paniculata_contig4956:13740..138751691481302.230041-CDS-H-paniculata_contig4956:13740..13875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4956 13741..13875 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4956.12147.1prot_H-paniculata_contig4956.12147.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4956 5214..13875 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4956.12147.1

>prot_H-paniculata_contig4956.12147.1 ID=prot_H-paniculata_contig4956.12147.1|Name=mRNA_H-paniculata_contig4956.12147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=953bp
ILPVTYASLKQSDAVGALKSLKKHTDQSVRKMSKAVISHWKTALVGDGAE
IGKHREKLDELHDKLKETQEAEKAVKEEAERAEKARRDAMRGRLPINGTG
PPVSAPPPPVLYTRASSANSINSSVDSDATSTPSKVSGPKMGTSEIDPSA
TAAAVAAAAAGSAPYPVATAPGGGTNTTSESTPKNGGTAPDQSAASIATG
ATGAVGPGVASGPGRFFVGRKFPGRGARGRMGTLAAAGRGNNAGSPGPRK
GKPPANAGAMRGGAAVAGKPGAAAVATGASVPGAPVATPSVGILKTSASA
ATAAGSSSTSSQGLTGSLDGGILSLGLVGAADVGAVGGIGGTGVGSGNAG
DPMVVEGAAEGSASPPPPSSPPIGDDPAGASGPPPIVSMEDLTRADALAK
KKQRKAKRLEPAAKKVSWADRAGRVLHAIKEFHSEDSPRTVSDPTSSPDA
DGQSADNLSLHHAGHSHWAERVKREREMERKFHGKGKGKSKGGGEGGGRG
SSSAAAKAEAEAEAAAAIAAAARKAMKPTVAWRRPGPYEDGVVHEDVIAL
EVESSEAESQGARTRAGLEQVYLSSGDIPPSPAEPDASSFIPTGDVSMYK
IPFFMESELEQALQEQQQQQQQQQQQQQAPPVKVGVTLEQMQALEAALAT
VDQHAANALRGRFSQEPRLLTSLIGVNNQINVPLLRSLAQQALSTPLNVH
LSIPVLPMPAAAPPQPVGQQYVQHTQQPPQQLPPPPPPRTTVQAGAPLAP
VPGQEYVAQYTVQQPAPGAPTVVSSQTLSQQPQPQPQPQQQLVQQPPQIV
YSATQPPPVMLVSTAQQQQPQPQQQQQQVLTYIATTQPIPPPAINQQQIA
PQPGFYPPPQQSQQQQQPAQQAMGLPLPPPPPPPPPVVYRPAGTAAATTV
GAPVPHVDSLTGAYTQSRTDSTIDEWEPRGERGGYRARDGDSRDADSRGW
TGR
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mRNA from alignment at H-paniculata_contig4956:5213..13875-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4956.12147.1 ID=mRNA_H-paniculata_contig4956.12147.1|Name=mRNA_H-paniculata_contig4956.12147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8663bp|location=Sequence derived from alignment at H-paniculata_contig4956:5213..13875- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTGCCGGTCACTTACGCTAGCCTGAAGCAGTCGGATGCCGTGGGCGC
GCTGAAGTCGCTAAAAAAACACACCGACCAATCGGTGCGCAAGATGTCCA
AGGCGGTCATAAGCCACTGGAAGACTGCCCTAGTGGTGAGTCATTTTCCA
GTCGTTCCAACACATCGGTCTGATCGTGATGCGCGAGTCAGGTAGAACAG
ATGAGTACTAGTAAGTCATGGACAGCCCATGCGATTGAGATATTATAGAT
CCTACGCATCATCACGTCTGTAGGATGAAGCTCTATCCCAGTCCGGTGGT
ACAAATCAATCATATGGCTGACTGTCACGCGGTAAGGATATAGCTCTCTC
GACGATACTGGGCAAAGAGGAATAATCTAGACCGTACGAATCGTGGACTA
CACGGCCGTAGGTAGCCGTGGCTCCACCGGCGCTGTGTTTCTCCGTTTAT
TGTGCAAGGGCAAAGTTATCATTGAAGGGGACCGATGGGAATCTTGGGGG
TGGGTGAAGCGGGATTTCGCGATAGCTTCTTGGTCTTGAACATGTATACG
CTTGGCTGTTGAAAGACGAAGAAGATAGTTTACTATCATGCTCGTAGTTT
TTCACGTTTATATAATGGTTGATCGAGTGTCATTATATGTGCCTATTTAT
CGTTCGTGTTATTTTTTCATTATTTATTTATTTATTTATTTTCACGGATC
GTGATCGTTTTTAGGGAGACGGGGCGGAGATCGGCAAGCATCGGGAGAAG
CTCGACGAATTACACGACAAGCTTAAAGAGGTGTGTGTGTGAGAGAGACG
GTCTGGATCATAGAGAAGGAACACAGGGCATTAATTATCAACCCACCGGG
ATAAATACAAAATACAAGGCACGGATAAATACGGGAAATCTGGAATGAAC
AATGTATCTGCTTGGGTTGGCGAAGATTATCCATGTGACGCGAATAATGT
GCAGTGTACTCGATATGCCATGGAGCATTGAAAAACTCGGGCGGATGGAG
TATTCAATCTGTACAGCAGGGCCCGGGAAAAAATGGGCCTGACTTCGTGC
CGAGTATTCGACCGCCTGGTGACCATCTGCAGAGTGACCATTCACGGACT
TGTAAACGAATAAATATGTTTTCTATACTCAAGGCAAATAATGATCGAGA
TAGTTGCGAATGCTCCATTCGTGTTTGTCCAGAGGGTGGTAATTGGGTGA
ATAATTGTACAACATAGCTTTAACTTGACCACTTCTCCACATATTTGCAT
TCGATCTTTGTGACACGAGCGTCAGATATATTAGTTTGCCGTGTCCATAT
TGACTGGAAAATGGGATGCGTCTGCCCATAATTCATACAATCCCCCACCC
CTTCCCTCTCTCTGGTTACCATCTTCCTGAAGTACGATTGTACAGCATGT
GCTGTAGACCGATCGCACCAGTTGCGGTGAGAACACTTCGAGATGCTTGG
GTTTCCACTTCGACGCCCCGTACTCCACCCTTAGCACGCGGTATCCTGCT
GTTTCATGTGTCCGATCACATCATGTGCCCCGAGTTGAAGACCTGCAGCG
AGAAAAACCAAGTGTGGCCGAGATACATGGCCCATGTTGGAAACATGAAG
CAAGCACGACCAACTCGAAACCGAGAAATCCCTGCTTGAGCAGTAAACTC
GTACAATTTGTCCCGCTAGCACCCTTGGAGGACGGCCGATCTCTCAATAG
TACGTACGTATTCCCTATCCCGTTATTCCTCTAATGTGTAGACTACCCGT
TAACCCCCGTTCTCGTTTGGTTGTCGCGTAGACCCAGGAAGCTGAAAAGG
CAGTGAAGGAGGAGGCCGAGAGGGCCGAGAAGGCACGGCGAGACGCGATG
CGCGGAAGGCTGCCCATCAACGGGACGGGCCCTCCAGTGTCCGCGCCCCC
GCCCCCTGTCCTCTACACCCGAGCCTCGTCCGCGAACTCAATAAATTCCT
CCGTGGACTCTGATGCGACTTCGACGCCGTCGAAGGTCAGCGGACCGAAA
ATGGGAACGAGTGAAATCGACCCATCAGCGACGGCAGCGGCGGTGGCGGC
GGCGGCGGCTGGAAGCGCTCCGTATCCAGTTGCGACAGCTCCAGGCGGAG
GGACCAACACCACGAGTGAAAGCACGCCCAAAAACGGCGGCACAGCTCCT
GACCAATCAGCAGCATCTATTGCTACGGGTGCTACGGGTGCTGTGGGTCC
TGGCGTAGCAAGCGGGCCTGGAAGATTTTTTGTAGGCCGGAAATTTCCAG
GGAGGGGTGCAAGGGGGAGAATGGGTACTTTGGCAGCGGCGGGACGTGGC
AATAACGCTGGCTCTCCGGGTCCCAGAAAGGGCAAGCCCCCGGCTAATGC
TGGTGCTATGCGGGGAGGAGCAGCAGTGGCGGGAAAACCAGGTGCCGCGG
CGGTCGCTACCGGCGCAAGCGTACCCGGCGCCCCTGTTGCAACTCCCAGT
GTCGGAATCTTGAAGACCTCCGCTTCCGCCGCCACCGCTGCTGGGAGCTC
CTCTACTTCCAGCCAGGGCTTAACGGGGTCGTTAGATGGTGGAATTTTGA
GCCTGGGGCTTGTCGGAGCGGCGGACGTAGGTGCGGTGGGGGGGATAGGT
GGCACTGGGGTCGGGAGTGGGAACGCGGGGGACCCGATGGTTGTCGAAGG
AGCAGCGGAGGGATCGGCGTCGCCGCCGCCGCCGAGCTCTCCGCCGATAG
GGGATGATCCGGCGGGAGCTTCCGGGCCGCCGCCGATCGTCTCAATGGAG
GACCTGACGCGCGCGGACGCCCTTGCGAAAAAGAAGCAGCGCAAGGCCAA
GCGGTTGGAGCCAGCGGCGAAGAAGGTGAGCTGGGCGGACCGGGCCGGTC
GGGTGCTGCACGCCATCAAGGAGTTCCATTCGGAGGACTCGCCCCGCACC
GTTTCAGACCCCACCAGCAGCCCGGATGCCGACGGTCAGTCGGCGGACAA
TCTCAGCCTGCATCATGCAGGCCACTCGCACTGGGCCGAGCGCGTAAAAC
GCGAGCGCGAAATGGAGCGCAAGTTTCACGGCAAGGGGAAGGGGAAGAGT
AAGGGAGGGGGAGAAGGAGGCGGCCGCGGGTCATCCTCGGCGGCGGCAAA
GGCCGAAGCTGAGGCCGAAGCAGCGGCTGCCATTGCAGCTGCCGCGCGGA
AAGCCATGAAGCCGACGGTTGCGTGGCGACGCCCGGGGCCGTACGAAGAT
GGCGTCGTGCACGAGGATGTAATCGCTTTGGAGGTGGAATCGAGCGAGGC
GGAGAGCCAGGGTGCTCGGACACGGGCTGGTTTGGAGCAGGCAAGAACAT
TTTTTCAATATACTACAGTTTTAGTGTCTCTTCGACAAGCTCTCCTTAAG
AGAGACTGAGTGGCGTCAGCAGGAAGGGTGACACTTGTATCTTGAGCCCA
TCATCGAACCCCCCCCCCTGGGTATTTCTAATGCTGTTGGGTTTTTTATG
GTACGCCCGATGGTCATTATGCCATAGTATTTTAAGCAACTTTTGACGGC
AGCGGCAGTTGTGTGTATTTCCAGGTGGAGGTCGGCAAGTAGTATGCCAC
GAGGCTGAATACCTCGCTTTTTTGCTCACCCGGTACCAGGTACACTTTAA
TCCAAAGCCACACGCACCTCTATTGTTGTTGCTGCCAGAGGTGGATTAAC
CACCTCGCCGCTTCAAGGCGTCAGTAAGCTACAGTCTTGCACTGGGCAAA
TCACAAGCAATATTATGTAACACAGTGTTTCTTTTCTTGTATCTTCGTTC
CTCAGGTCTACCTTTCTAGTGGAGATATCCCACCATCCCCGGCAGAACCG
GATGCCTCTTCGTTTATTCCCACTGGTGAGTCACTGAGGGCACTTGAAGC
GACAGCGGTGTACAACGCCGCACCCCCCGCGCCCTCCGTTCGCGCCTTGT
CATACTTTTTTTCGGGAAATGCCAACGGTGTAGATGGCAAGTTCCGACCG
ACGCCGTACATCCTGGCGACGACTGTCGGTTTTTTTTTGTTTTTTTTTCA
GTTGCAACGCTGTTGTGCTCGCTGGCTGTATGCGCCATTTTTTTAACGGT
GTGCAGCTCCCCGCGCTCCGCTGCCCGATTAGCAATCGGAGATCGCTGTT
ATTGCACCTAAGCTTTGCTATTCTCAAAAGAATGCATGCAAAATATGATG
ACGTCCATCCCAATTCCCTCCATACGAGGACCGAATTCACATGGTGAGAG
AATGCCCTCTATATGAAAAAGACAGAGAGATGTACTATATACTAATGAGT
GAAAAAGGAAACGTAAGAAGGATGATATATAGAGGAGTGTCAGAATCCTG
ACATTGCGAAAATAAGTCGATAGCGATTCTAGGAGGTTAACGTTGACCTG
AACAGGTGAGGGTTAAGATATTAATACTATTGTAGGTGAAACGTTTTCGA
GCCATTGGCCGTCGGAAGTCGCTCTGACAAGAGAATACGGACCCTCTCGG
TCCGTAGCGCAGGAGCTCCGTCCTCCCTAGGACGCGTGGTCGATGGTCAA
ACAACTATGGTACGCAAAACATTAGTGCCCCCCCCCTCCCCCCTCTTACT
TCTCTCTTTGTCCCGTCTCGCCTATTCTTTGCCCACAGGCGACGTGAGCA
TGTATAAGATACCGTTCTTCATGGAGTCTGAGTTAGAGCAGGCACTGCAA
GAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAAGCACCACC
GGTGAAGGTCGGGGTGAGTTGTTTCTGTACCTCGAATTACGATCATCCTT
TAGGTGGCCAGTCCATGATCTTGATCGTGCTTGTTTCGTGCCACCGACCA
ACCGGTTTGGATTGGGTTAGGGGATCGGCCTATTAGACCGCGCGATACGA
TGGGGTTCTTGACCGCTGCCGAAGCGTTTACGCCCTGAGAATCCATTTAT
CATTGCCCCATATTGTCTACGTTCGGAAGTGTTTATTTCCGGCAGAAGGA
CTTGCGTACACGCTACAACCTCTGGTGTATACCCGAGGGCTCTCGTCCGG
ATCGACACCCCTCGGTGCCAAACTCGGTCCCTAGATCTACCCAGTACGCG
GGTTAATCCCACACATCTGGACTTCGGCCGACGCATCTGCTCTCACCCCC
ATTGACTGATTGGCTGATTTGGATTTTTGGACCGGATTGGGGGGGGGGTT
GGGTGAGTGTACTTACGAAAACACATGCCGCAGTCTTCCGGTGATTGATT
TCGCATCCCGACAGTATCGAGACGGCCAGGCTATGTTTCACAAGGGGGAT
ACTAGCCATTATTGTAGTCACCATCCTTGCGTTGCTACGTCAGCCGGAGT
TTGTCATGGAGTATTGGGCACCCCAGGTGAACGATGTTTTACGTCCGGCA
GGCGTGGCCAAAGCCCAAGTACCGCATGGGACTTTGATCTTCGCGCGTAT
GTACTTTATCTCTTCGTGTGTGACACACTTGGAATATGATCTGTTCATGT
AATCCTGATGGGTTTTTGGCCATTAACTATTTTTTCTCGAATTACAATAA
CCAGTTCAGTAGACATCCGGTGGCATGTGAGGTCTCCGACCGAGGTCAAC
AAGCTCACAGGATATACCACATGAACTCTCCATGCCCTCTGTACAACAGG
TGTACAGCTCCGTACAAAGGTCAGCCTCAACGACGGGGTGGCAGGGGGAA
AACACTTAATTCCTGTTGAGGATATAGGCGGTACTCACCATGGCGCCCTC
TAATTTAGCGATACATATTCAAAGAACATGTAATAATACCGCACAAATTT
CGAATCCTGTCCGTACATCACAACGTTGCAAAATTAGTTTCCTTTGGGAT
GCTGTTTTCCCGGGTCCACTGTGCGTGCACGTACTCGTACATGGTTCCGC
AGGCGACCATGGTCGGGGGGGCTGTCTCTCTAGTTTTTCGGCCTGCAATT
TGTACGTTCACAGGGTTCACAAGGCCCGATCGCCAGGACCAGAAGCTATT
CATATCTAAAAATAAGAGTTCGAGCCTCTAATGTTTGAATAAATTCCAAG
AAATTTCCCCTGAGAAATCGTGCTCAACCGGTGCGCCTGAAATATTCCCA
TATACCGTGAGCATAAAGGATGGAGATGTCGCACCCGGGTGCGAACGTTT
TCTCAAATGCTACTGTGTCGAGAATGGAGACATTATGCGGTCGAATTAAC
TGTCAATTGAGAGATTTCCGCAAGATCTTTCCAGCGTCACGTTATTCGTT
GTCAGGAACGCCGTAGATCTTGAGATAATCGTAGCCAATAACCGTTCATA
CCGTGGCGCGATACCTCCGTTGGGTTTTGGGGTACTAAATATAAGTTGCT
CCTATCTCAGATGAAGTAATATTCATAAATAGATTCCATAGGTCTTCACA
GCACTTCCAGGATCAGCAGTAACCCAGTATAGTGGACTTGATTCAATATA
TCGGTCTTGTAAAAAGACAGTTCGTGGGAAGGAAGTAGGGAGTGGACGCA
TAAGGCGGCGGGAATATCCAGCATGTTCGAACCCATTCTATCGCCTGTTC
AAAACAGCGACATCGATTCCGATATATGGGCAGTATGCCGCTACTGGTAA
AATTGGTTACGTCCTTTGGAAGGTGTTGAGACTCTCACACTAAATACGAG
CATTGCATCAGCTGGCCGATGCTGTGTAAGTGCACAGAGATGGCTCCGTC
CTTAACTTTTTTCTTTGCTTTTGTTTTTCGGTGCGTGTCCATCTCTTCCG
CTCCTCCACTGAATACGATTGCCCACTGTCAGGTGACCCTGGAGCAAATG
CAGGCTTTGGAGGCCGCCCTCGCCACGGTGGACCAGCACGCGGCAAATGC
TTTACGGGGCCGGTTTTCGCAGGAGCCGCGGTTACTGACCTCGCTGATCG
GCGTCAACAACCAGATAAACGTTCCCCTTCTCAGGTGTGCTCACTTGCTA
CTCTGTGGCTGTTGTTGTATTGGTTATTTTTCAGCGTTTTTGCTTGTCTT
TTATTGGCGCATGTCTGATTCCGTCTCGAAAACATGCTCCGTGGATTCTG
CACAGAATCACAGAAATCAGTGAAAAACATACATAGACATAGGCGATTTG
GTGAGGAAGTCATAACTTGCCAAGCGACTGTTCCAGCGGCACCTCGTTTA
GTTAAAGCTTGTAGTGGTTCAGACCTCTGCGGCAGTCTGACGACGCTGCC
CCCAAACCCGAAAGTCGGATTAACCTCGCGCTTTGCCACACGTTACAGCC
CTCCCTCCTATCCTTTCTTTTGAGAGTAAACGCCATATTTCATGTTCAGT
GTTCAGCGTAGGTGGTGTACCCGAAATGTTCCCGCAATCCCATTGAATTC
CCTGGCAACGGGTTTTAACAAAGCGACGAGCTTATTGGGTCTCTCCATCA
TTTGAAGCGTAATTACATATCTGAAACTCAGCTCGTGAAAGTGATCGACT
ACTGTGGTGAGGATTGCCGAAACTTGTTTTTTTTTCATCAGTGTCCTTCC
TCCCTGCTCGCGATGATGGTTACCGCTATTTTGATTAAACTTGGCTTACA
AGTGTACACAAGTGTACATTTAGTTCAAGTCAGCTTCATAACCTCAACAT
GGGTACAACGGAGTTATAATATGAGGTTCAGAGTTATACGTTAACTGTCT
GGCAGGGTAATTGCCACCACCCCCCTTCAAGAGTGGTTAGCCATCGCAGA
TCCCTCTATATAACCTTTATATTGAAACAAAATCTCTGTTGTCTCAAGGA
CGCGTGGTTGATTATCCAACCAGTACGGCACCCCAAAACATGAGTACCTC
CCCCGCCCCTCCGTTCAGTATTGATTACTAGTGGTGCCGATAACACCCCT
CCCCCCTCCCCATCTTCGCGCGCTCGTGTTCTCCATGTTTCCGAATGTAT
GTTTTACCAGGTCCCTCGCCCAGCAGGCCTTGAGCACGCCACTGAACGTC
CACCTCTCGATACCGGTGCTGCCCATGCCAGCAGCCGCCCCCCCCCAACC
GGTGGGCCAACAATACGTCCAACATACGCAACAACCGCCGCAGCAGTTGC
CGCCGCCACCGCCACCGCGAACAACCGTCCAGGCGGGCGCACCTCTTGCT
CCGGTGCCGGGGCAGGAGTACGTGGCGCAATATACGGTGCAGCAACCGGC
GCCGGGCGCGCCGACCGTCGTGTCTTCCCAAACCTTGTCCCAGCAGCCAC
AGCCTCAACCGCAACCACAGCAGCAACTTGTGCAGCAGCCCCCGCAGATC
GTGTACTCGGCCACGCAGCCGCCCCCCGTGATGCTGGTGAGCACCGCACA
GCAACAACAGCCACAACCACAGCAGCAGCAGCAGCAAGTCTTGACCTACA
TAGCAACAACCCAGCCTATACCGCCTCCAGCGATCAACCAGCAACAGATT
GCACCGCAGCCGGGCTTTTATCCACCGCCACAGCAATCACAACAGCAGCA
GCAGCCGGCTCAACAGGCAATGGGCCTCCCGCTCCCCCCGCCGCCTCCGC
CACCACCCCCTGTGGTGTACCGGCCAGCCGGAACGGCAGCGGCAACGACA
GTTGGAGCTCCTGTTCCCCACGTGGACTCCCTGACCGGTGCTTACACCCA
GTCCAGAACCGACTCTACGATAGACGAGTGGGAACCTCGAGGAGAGCGCG
GGGGATACAGGGCGCGAGATGGGGACAGTCGGGACGCGGACAGTAGGGGC
TGGACGGGGCGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig4956:5213..13875-

>mRNA_H-paniculata_contig4956.12147.1 ID=mRNA_H-paniculata_contig4956.12147.1|Name=mRNA_H-paniculata_contig4956.12147.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5718bp|location=Sequence derived from alignment at H-paniculata_contig4956:5213..13875- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATTTTGCCGGTCACTTACGCTAGCCTGAAGCAGTCGGATGCCGTGGGCGC
GCTGAAGTCGCTAAAAAAACACACCGACCAATCGGTGCGCAAGATGTCCA
AGGCGGTCATAAGCCACTGGAAGACTGCCCTAGTGATTTTGCCGGTCACT
TACGCTAGCCTGAAGCAGTCGGATGCCGTGGGCGCGCTGAAGTCGCTAAA
AAAACACACCGACCAATCGGTGCGCAAGATGTCCAAGGCGGTCATAAGCC
ACTGGAAGACTGCCCTAGTGGGAGACGGGGCGGAGATCGGCAAGCATCGG
GAGAAGCTCGACGAATTACACGACAAGCTTAAAGAGGGAGACGGGGCGGA
GATCGGCAAGCATCGGGAGAAGCTCGACGAATTACACGACAAGCTTAAAG
AGACCCAGGAAGCTGAAAAGGCAGTGAAGGAGGAGGCCGAGAGGGCCGAG
AAGGCACGGCGAGACGCGATGCGCGGAAGGCTGCCCATCAACGGGACGGG
CCCTCCAGTGTCCGCGCCCCCGCCCCCTGTCCTCTACACCCGAGCCTCGT
CCGCGAACTCAATAAATTCCTCCGTGGACTCTGATGCGACTTCGACGCCG
TCGAAGGTCAGCGGACCGAAAATGGGAACGAGTGAAATCGACCCATCAGC
GACGGCAGCGGCGGTGGCGGCGGCGGCGGCTGGAAGCGCTCCGTATCCAG
TTGCGACAGCTCCAGGCGGAGGGACCAACACCACGAGTGAAAGCACGCCC
AAAAACGGCGGCACAGCTCCTGACCAATCAGCAGCATCTATTGCTACGGG
TGCTACGGGTGCTGTGGGTCCTGGCGTAGCAAGCGGGCCTGGAAGATTTT
TTGTAGGCCGGAAATTTCCAGGGAGGGGTGCAAGGGGGAGAATGGGTACT
TTGGCAGCGGCGGGACGTGGCAATAACGCTGGCTCTCCGGGTCCCAGAAA
GGGCAAGCCCCCGGCTAATGCTGGTGCTATGCGGGGAGGAGCAGCAGTGG
CGGGAAAACCAGGTGCCGCGGCGGTCGCTACCGGCGCAAGCGTACCCGGC
GCCCCTGTTGCAACTCCCAGTGTCGGAATCTTGAAGACCTCCGCTTCCGC
CGCCACCGCTGCTGGGAGCTCCTCTACTTCCAGCCAGGGCTTAACGGGGT
CGTTAGATGGTGGAATTTTGAGCCTGGGGCTTGTCGGAGCGGCGGACGTA
GGTGCGGTGGGGGGGATAGGTGGCACTGGGGTCGGGAGTGGGAACGCGGG
GGACCCGATGGTTGTCGAAGGAGCAGCGGAGGGATCGGCGTCGCCGCCGC
CGCCGAGCTCTCCGCCGATAGGGGATGATCCGGCGGGAGCTTCCGGGCCG
CCGCCGATCGTCTCAATGGAGGACCTGACGCGCGCGGACGCCCTTGCGAA
AAAGAAGCAGCGCAAGGCCAAGCGGTTGGAGCCAGCGGCGAAGAAGGTGA
GCTGGGCGGACCGGGCCGGTCGGGTGCTGCACGCCATCAAGGAGTTCCAT
TCGGAGGACTCGCCCCGCACCGTTTCAGACCCCACCAGCAGCCCGGATGC
CGACGGTCAGTCGGCGGACAATCTCAGCCTGCATCATGCAGGCCACTCGC
ACTGGGCCGAGCGCGTAAAACGCGAGCGCGAAATGGAGCGCAAGTTTCAC
GGCAAGGGGAAGGGGAAGAGTAAGGGAGGGGGAGAAGGAGGCGGCCGCGG
GTCATCCTCGGCGGCGGCAAAGGCCGAAGCTGAGGCCGAAGCAGCGGCTG
CCATTGCAGCTGCCGCGCGGAAAGCCATGAAGCCGACGGTTGCGTGGCGA
CGCCCGGGGCCGTACGAAGATGGCGTCGTGCACGAGGATGTAATCGCTTT
GGAGGTGGAATCGAGCGAGGCGGAGAGCCAGGGTGCTCGGACACGGGCTG
GTTTGGAGCAGACCCAGGAAGCTGAAAAGGCAGTGAAGGAGGAGGCCGAG
AGGGCCGAGAAGGCACGGCGAGACGCGATGCGCGGAAGGCTGCCCATCAA
CGGGACGGGCCCTCCAGTGTCCGCGCCCCCGCCCCCTGTCCTCTACACCC
GAGCCTCGTCCGCGAACTCAATAAATTCCTCCGTGGACTCTGATGCGACT
TCGACGCCGTCGAAGGTCAGCGGACCGAAAATGGGAACGAGTGAAATCGA
CCCATCAGCGACGGCAGCGGCGGTGGCGGCGGCGGCGGCTGGAAGCGCTC
CGTATCCAGTTGCGACAGCTCCAGGCGGAGGGACCAACACCACGAGTGAA
AGCACGCCCAAAAACGGCGGCACAGCTCCTGACCAATCAGCAGCATCTAT
TGCTACGGGTGCTACGGGTGCTGTGGGTCCTGGCGTAGCAAGCGGGCCTG
GAAGATTTTTTGTAGGCCGGAAATTTCCAGGGAGGGGTGCAAGGGGGAGA
ATGGGTACTTTGGCAGCGGCGGGACGTGGCAATAACGCTGGCTCTCCGGG
TCCCAGAAAGGGCAAGCCCCCGGCTAATGCTGGTGCTATGCGGGGAGGAG
CAGCAGTGGCGGGAAAACCAGGTGCCGCGGCGGTCGCTACCGGCGCAAGC
GTACCCGGCGCCCCTGTTGCAACTCCCAGTGTCGGAATCTTGAAGACCTC
CGCTTCCGCCGCCACCGCTGCTGGGAGCTCCTCTACTTCCAGCCAGGGCT
TAACGGGGTCGTTAGATGGTGGAATTTTGAGCCTGGGGCTTGTCGGAGCG
GCGGACGTAGGTGCGGTGGGGGGGATAGGTGGCACTGGGGTCGGGAGTGG
GAACGCGGGGGACCCGATGGTTGTCGAAGGAGCAGCGGAGGGATCGGCGT
CGCCGCCGCCGCCGAGCTCTCCGCCGATAGGGGATGATCCGGCGGGAGCT
TCCGGGCCGCCGCCGATCGTCTCAATGGAGGACCTGACGCGCGCGGACGC
CCTTGCGAAAAAGAAGCAGCGCAAGGCCAAGCGGTTGGAGCCAGCGGCGA
AGAAGGTGAGCTGGGCGGACCGGGCCGGTCGGGTGCTGCACGCCATCAAG
GAGTTCCATTCGGAGGACTCGCCCCGCACCGTTTCAGACCCCACCAGCAG
CCCGGATGCCGACGGTCAGTCGGCGGACAATCTCAGCCTGCATCATGCAG
GCCACTCGCACTGGGCCGAGCGCGTAAAACGCGAGCGCGAAATGGAGCGC
AAGTTTCACGGCAAGGGGAAGGGGAAGAGTAAGGGAGGGGGAGAAGGAGG
CGGCCGCGGGTCATCCTCGGCGGCGGCAAAGGCCGAAGCTGAGGCCGAAG
CAGCGGCTGCCATTGCAGCTGCCGCGCGGAAAGCCATGAAGCCGACGGTT
GCGTGGCGACGCCCGGGGCCGTACGAAGATGGCGTCGTGCACGAGGATGT
AATCGCTTTGGAGGTGGAATCGAGCGAGGCGGAGAGCCAGGGTGCTCGGA
CACGGGCTGGTTTGGAGCAGGTCTACCTTTCTAGTGGAGATATCCCACCA
TCCCCGGCAGAACCGGATGCCTCTTCGTTTATTCCCACTGGTCTACCTTT
CTAGTGGAGATATCCCACCATCCCCGGCAGAACCGGATGCCTCTTCGTTT
ATTCCCACTGGCGACGTGAGCATGTATAAGATACCGTTCTTCATGGAGTC
TGAGTTAGAGCAGGCACTGCAAGAGCAGCAGCAGCAGCAGCAGCAGCAGC
AACAACAGCAGCAAGCACCACCGGTGAAGGTCGGGGCGACGTGAGCATGT
ATAAGATACCGTTCTTCATGGAGTCTGAGTTAGAGCAGGCACTGCAAGAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAACAGCAGCAAGCACCACCGGT
GAAGGTCGGGGTGACCCTGGAGCAAATGCAGGCTTTGGAGGCCGCCCTCG
CCACGGTGGACCAGCACGCGGCAAATGCTTTACGGGGCCGGTTTTCGCAG
GAGCCGCGGTTACTGACCTCGCTGATCGGCGTCAACAACCAGATAAACGT
TCCCCTTCTCAGGTGACCCTGGAGCAAATGCAGGCTTTGGAGGCCGCCCT
CGCCACGGTGGACCAGCACGCGGCAAATGCTTTACGGGGCCGGTTTTCGC
AGGAGCCGCGGTTACTGACCTCGCTGATCGGCGTCAACAACCAGATAAAC
GTTCCCCTTCTCAGGTCCCTCGCCCAGCAGGCCTTGAGCACGCCACTGAA
CGTCCACCTCTCGATACCGGTGCTGCCCATGCCAGCAGCCGCCCCCCCCC
AACCGGTGGGCCAACAATACGTCCAACATACGCAACAACCGCCGCAGCAG
TTGCCGCCGCCACCGCCACCGCGAACAACCGTCCAGGCGGGCGCACCTCT
TGCTCCGGTGCCGGGGCAGGAGTACGTGGCGCAATATACGGTGCAGCAAC
CGGCGCCGGGCGCGCCGACCGTCGTGTCTTCCCAAACCTTGTCCCAGCAG
CCACAGCCTCAACCGCAACCACAGCAGCAACTTGTGCAGCAGCCCCCGCA
GATCGTGTACTCGGCCACGCAGCCGCCCCCCGTGATGCTGGTGAGCACCG
CACAGCAACAACAGCCACAACCACAGCAGCAGCAGCAGCAAGTCTTGACC
TACATAGCAACAACCCAGCCTATACCGCCTCCAGCGATCAACCAGCAACA
GATTGCACCGCAGCCGGGCTTTTATCCACCGCCACAGCAATCACAACAGC
AGCAGCAGCCGGCTCAACAGGCAATGGGCCTCCCGCTCCCCCCGCCGCCT
CCGCCACCACCCCCTGTGGTGTACCGGCCAGCCGGAACGGCAGCGGCAAC
GACAGTTGGAGCTCCTGTTCCCCACGTGGACTCCCTGACCGGTGCTTACA
CCCAGTCCAGAACCGACTCTACGATAGACGAGTGGGAACCTCGAGGAGAG
CGCGGGGGATACAGGGCGCGAGATGGGGACAGTCGGGACGCGGACAGTAG
GGGCTGGACGGGGCGGGTCCCTCGCCCAGCAGGCCTTGAGCACGCCACTG
AACGTCCACCTCTCGATACCGGTGCTGCCCATGCCAGCAGCCGCCCCCCC
CCAACCGGTGGGCCAACAATACGTCCAACATACGCAACAACCGCCGCAGC
AGTTGCCGCCGCCACCGCCACCGCGAACAACCGTCCAGGCGGGCGCACCT
CTTGCTCCGGTGCCGGGGCAGGAGTACGTGGCGCAATATACGGTGCAGCA
ACCGGCGCCGGGCGCGCCGACCGTCGTGTCTTCCCAAACCTTGTCCCAGC
AGCCACAGCCTCAACCGCAACCACAGCAGCAACTTGTGCAGCAGCCCCCG
CAGATCGTGTACTCGGCCACGCAGCCGCCCCCCGTGATGCTGGTGAGCAC
CGCACAGCAACAACAGCCACAACCACAGCAGCAGCAGCAGCAAGTCTTGA
CCTACATAGCAACAACCCAGCCTATACCGCCTCCAGCGATCAACCAGCAA
CAGATTGCACCGCAGCCGGGCTTTTATCCACCGCCACAGCAATCACAACA
GCAGCAGCAGCCGGCTCAACAGGCAATGGGCCTCCCGCTCCCCCCGCCGC
CTCCGCCACCACCCCCTGTGGTGTACCGGCCAGCCGGAACGGCAGCGGCA
ACGACAGTTGGAGCTCCTGTTCCCCACGTGGACTCCCTGACCGGTGCTTA
CACCCAGTCCAGAACCGACTCTACGATAGACGAGTGGGAACCTCGAGGAG
AGCGCGGGGGATACAGGGCGCGAGATGGGGACAGTCGGGACGCGGACAGT
AGGGGCTGGACGGGGCGG
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