prot_H-paniculata_contig49552.12144.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49552.12144.1
Unique Nameprot_H-paniculata_contig49552.12144.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A8I6XHP4_HORVV (Uncharacterized protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6XHP4_HORVV)

HSP 1 Score: 83.2 bits (204), Expect = 2.350e-16
Identity = 39/108 (36.11%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            M+ +  +G WT V RP N+  V    +YK K    G + K K RLVA G  Q +G+ + E  +P   + + +++L+LAA +DWK+ H D + A+L   + +E++VE P
Sbjct:  690 MKAIESNGTWTLVTRPPNQKTVGLKWVYKLKKDTKGAIVKYKARLVAKGYVQRQGVDYDEVFAPVARIETVRVLLALAAQEDWKVHHMDVKSAFLNGDLTEEVYVEQP 797          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 81.6 bits (200), Expect = 8.340e-16
Identity = 41/108 (37.96%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            M+ L D   +  VE P+N  +V +  +++ K   +GK+E  K RLVA G  QI GI F +  +P   +AS +++L+LAA  DW +   D + AYL A +++EIF++ P
Sbjct:  983 MRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQP 1090          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL)

HSP 1 Score: 81.6 bits (200), Expect = 8.360e-16
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPID--QEIFVEIP 108
            +  L  +G WT V RP  + +V    + + K    G++EK K RLVA G  Q++G+ + E  +P   +AS ++VL++AA  DW +   DF  AYL   +D  +EIF+E P
Sbjct: 1085 LDSLKSAGTWTVVPRPSGRNVVDCKWVLRIKKNAAGEIEKYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFDFNSAYLNGELDTDEEIFMEQP 1194          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A5A7TC06_CUCME (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TC06_CUCME)

HSP 1 Score: 81.3 bits (199), Expect = 1.080e-15
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0
Query:    7 SGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            +G W  V+ PK K  +    +YK K   DG +EK K RLVA G+ Q  GI F+E  SP     + ++VL+LAA Q W +   D +  +L   +++E++VE P
Sbjct:  466 NGTWKMVDLPKGKNAIDLKWVYKTKFAADGSLEKHKARLVAKGHAQQHGINFEETFSPVARFETVRVVLALAAQQQWSVYQFDVKSDFLNEELEEEVYVEQP 567          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A401GTF6_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GTF6_9APHY)

HSP 1 Score: 80.5 bits (197), Expect = 2.120e-15
Identity = 40/108 (37.04%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            MQ L D   +  VE P+N  IV +  I++ K   +G++E  K RLVA G  Q+ G+ F +  +P   +AS +++L+LAA  DW +   D + AYL A ++++IF++ P
Sbjct:  952 MQNLRDHHTYDLVEPPENTNIVGSKFIFRIKHNANGEIESYKARLVAQGFTQVPGVDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNAELEEDIFMKQP 1059          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A4S4M1W0_9APHY (Uncharacterized protein (Fragment) n=1 Tax=Antrodiella citrinella TaxID=2447956 RepID=A0A4S4M1W0_9APHY)

HSP 1 Score: 80.5 bits (197), Expect = 2.120e-15
Identity = 35/109 (32.11%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKL-IVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            ++ L+ +  WT VERP + + +V + ++ + K    G+++K K RLVA G  Q+ G+ + E  +P   ++S +++L++AA  +W ++  DF  AYL +P+D+++++E P
Sbjct: 1177 IENLVANNTWTVVERPPDDVNVVDSKIVLRVKKNAAGEIDKYKARLVARGFTQVHGVDYFETFAPVAKLSSFRLLLAIAARNNWDIKSFDFSSAYLNSPLDEDVYMEQP 1285          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A6D2HEE2_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2HEE2_9BRAS)

HSP 1 Score: 80.1 bits (196), Expect = 2.680e-15
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 0
Query:    4 LIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            L DSG W  V+ P  K  +    ++K K   DG VE+ K RLVA GNRQ +G+ + E  +P   + + +  L++AA+++W L   D   A+L   +D+E++++ P
Sbjct:   46 LEDSGTWDLVDLPPGKRAIGCKWVFKLKFNSDGTVERHKARLVALGNRQEEGVDYDETFAPVIKMTTVRTFLNVAASRNWALHQMDVHNAFLHGTLDEEVYMKPP 150          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: UPI000B788C25 (uncharacterized protein LOC110730797 n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=UPI000B788C25)

HSP 1 Score: 78.2 bits (191), Expect = 2.810e-15
Identity = 37/108 (34.26%), Postives = 60/108 (55.56%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            +  L  +  W  V  PK K ++    ++K K+  DG VE+ K RLVA G  Q  GI + E  SP   + + + +LSLAA+Q WK+   D   A+L   + +E+++++P
Sbjct:    5 IDALTANNTWVLVPLPKEKKLIGCKWVFKVKLKADGTVERLKARLVAKGFTQKYGIDYLETFSPVVKMTTKRCILSLAASQSWKIHQLDLNNAFLHGELHEEVYMKVP 112          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: UPI0008FD5801 (uncharacterized protein LOC109116481 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI0008FD5801)

HSP 1 Score: 79.0 bits (193), Expect = 5.470e-15
Identity = 39/108 (36.11%), Postives = 61/108 (56.48%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            +  L+ +G W+ V  P  K  V    +YK K   DG VE+ K RLVA G  Q +G+ F +  SP   + + K++L+LAA Q+W L   D   A+L   +++EI++ +P
Sbjct:    5 LDALVGNGTWSVVSLPPGKRAVGCKWVYKIKRKADGSVERYKARLVAKGFTQQEGVDFIDTFSPVAKLVTVKLLLALAAKQNWILTQMDVTNAFLHGDLEEEIYMSLP 112          
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Match: A0A7N2KRT0_QUELO (Integrase catalytic domain-containing protein n=1 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2KRT0_QUELO)

HSP 1 Score: 78.6 bits (192), Expect = 1.000e-14
Identity = 38/108 (35.19%), Postives = 62/108 (57.41%), Query Frame = 0
Query:    1 MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGNRQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPIDQEIFVEIP 108
            M+ L  +  W  V+ P  K +V    ++  K   DG VE+ K RLVA G  Q  GI ++E  +P   + S ++++SLAA QDW L   D + A+L   +++E+++E+P
Sbjct:  867 MRALKKNDTWDYVDLPNGKRVVGCKWVFTIKHKADGSVERYKARLVAKGFTQTYGIDYKETFAPVAKMNSIRVLISLAANQDWPLHQLDVKNAFLHGDLEEEVYMELP 974          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49552.12144.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8I6XHP4_HORVV2.350e-1636.11Uncharacterized protein n=1 Tax=Hordeum vulgare su... [more]
A0A401GQU1_9APHY8.340e-1637.96Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A146H565_MYCCL8.360e-1637.27Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]
A0A5A7TC06_CUCME1.080e-1538.24Retrovirus-related Pol polyprotein from transposon... [more]
A0A401GTF6_9APHY2.120e-1537.04Integrase catalytic domain-containing protein n=1 ... [more]
A0A4S4M1W0_9APHY2.120e-1532.11Uncharacterized protein (Fragment) n=1 Tax=Antrodi... [more]
A0A6D2HEE2_9BRAS2.680e-1535.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000B788C252.810e-1534.26uncharacterized protein LOC110730797 n=1 Tax=Cheno... [more]
UPI0008FD58015.470e-1536.11uncharacterized protein LOC109116481 n=1 Tax=Taren... [more]
A0A7N2KRT0_QUELO1.000e-1435.19Integrase catalytic domain-containing protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 9..108
e-value: 3.2E-19
score: 69.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 9..108
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 9..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49552contigH-paniculata_contig49552:921..1244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49552.12144.1mRNA_H-paniculata_contig49552.12144.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49552 912..1244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49552.12144.1 ID=prot_H-paniculata_contig49552.12144.1|Name=mRNA_H-paniculata_contig49552.12144.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MQGLIDSGVWTQVERPKNKLIVSTMMIYKRKIGEDGKVEKCKCRLVAHGN
RQIKGIQFQEASSPAPAVASTKMVLSLAATQDWKLRHGDFEQAYLQAPID
QEIFVEIP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like