prot_H-paniculata_contig49540.12143.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49540.12143.1
Unique Nameprot_H-paniculata_contig49540.12143.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length47
Homology
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: D7FHC8_ECTSI (Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHC8_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 6.650e-17
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            +VVRRWVNEV E VSSQHEMVQYHALSLLYQIKAHD+LAVSKLV+
Sbjct:   60 EVVRRWVNEVTEGVSSQHEMVQYHALSLLYQIKAHDKLAVSKLVT 104          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A6U1MSQ3_9STRA (Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1MSQ3_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.050e-15
Identity = 36/44 (81.82%), Postives = 44/44 (100.00%), Query Frame = 0
Query:    2 VVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            ++RRWVNEVQEA++SQ++MVQYHALSLLYQIKAHD+LAVSKLV+
Sbjct:  199 LIRRWVNEVQEALNSQNQMVQYHALSLLYQIKAHDKLAVSKLVN 242          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A8K1CUF4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUF4_PYTOL)

HSP 1 Score: 76.3 bits (186), Expect = 5.240e-15
Identity = 35/45 (77.78%), Postives = 43/45 (95.56%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            +VVRRWVNEVQEAV+S H+MVQYHA++LLYQI+ HDRLAVSKL++
Sbjct:  205 EVVRRWVNEVQEAVNSPHDMVQYHAVALLYQIRQHDRLAVSKLIA 249          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A2D4BSX7_PYTIN (Coatomer subunit gamma n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BSX7_PYTIN)

HSP 1 Score: 75.5 bits (184), Expect = 9.770e-15
Identity = 34/44 (77.27%), Postives = 42/44 (95.45%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLV 44
            +VVRRWVNEVQEA++S H+MVQYHA++LLYQI+ HDRLAVSKL+
Sbjct:  215 EVVRRWVNEVQEAINSPHDMVQYHAVALLYQIRQHDRLAVSKLI 258          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: K3WPR6_GLOUD (Coatomer subunit gamma n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WPR6_GLOUD)

HSP 1 Score: 75.5 bits (184), Expect = 9.770e-15
Identity = 34/45 (75.56%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            +VVRRWVNEVQEAV+SQH+MVQYHA+ LLYQI+ HD+LAVSK ++
Sbjct:  211 EVVRRWVNEVQEAVNSQHDMVQYHAVGLLYQIRQHDKLAVSKFIN 255          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A7S3LLT2_9STRA (Coatomer subunit gamma n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LLT2_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.350e-14
Identity = 34/45 (75.56%), Postives = 41/45 (91.11%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            ++VRRWVNEVQEAV+S+ EMVQYHALSLLY IK HDRLA+ +LV+
Sbjct:  209 EIVRRWVNEVQEAVNSRSEMVQYHALSLLYTIKCHDRLAIGRLVT 253          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A7S1U574_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U574_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 6.360e-14
Identity = 34/45 (75.56%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            +VVRRWVNEVQEAV+S  EMVQ+HAL+LLYQ+K HD+LA+SKLV+
Sbjct:  258 EVVRRWVNEVQEAVNSSSEMVQFHALALLYQLKQHDKLAISKLVA 302          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: F0WG92_9STRA (Coatomer subunit gamma n=5 Tax=Albugo TaxID=65356 RepID=F0WG92_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.190e-13
Identity = 32/45 (71.11%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            +V+RRWVNEV+EAV+S H+MVQYH +SLLYQI+ HD+LAVSKL++
Sbjct:  209 EVIRRWVNEVKEAVNSPHKMVQYHGVSLLYQIRRHDKLAVSKLIA 253          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: A0A662XY71_9STRA (Coatomer subunit gamma n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XY71_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.620e-13
Identity = 32/45 (71.11%), Postives = 42/45 (93.33%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVS 45
            ++VRRWVNEVQEAV+S ++MVQYH +SLLYQI+ HD+LAVSKL++
Sbjct:  174 EIVRRWVNEVQEAVNSSNDMVQYHGVSLLYQIRQHDKLAVSKLIT 218          
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Match: COPG_CAEEL (Probable coatomer subunit gamma n=13 Tax=Caenorhabditis TaxID=6237 RepID=COPG_CAEEL)

HSP 1 Score: 72.0 bits (175), Expect = 1.620e-13
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 0
Query:    1 QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLV 44
            +VVRRW NEVQEAVSS + MVQYHAL+LLYQI+A+DRLAV+KLV
Sbjct:  168 EVVRRWANEVQEAVSSDNHMVQYHALALLYQIRANDRLAVNKLV 211          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49540.12143.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHC8_ECTSI6.650e-1788.89Coatomer subunit gamma n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6U1MSQ3_9STRA2.050e-1581.82Coatomer subunit gamma n=1 Tax=Fibrocapsa japonica... [more]
A0A8K1CUF4_PYTOL5.240e-1577.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BSX7_PYTIN9.770e-1577.27Coatomer subunit gamma n=1 Tax=Pythium insidiosum ... [more]
K3WPR6_GLOUD9.770e-1575.56Coatomer subunit gamma n=2 Tax=Pythiaceae TaxID=47... [more]
A0A7S3LLT2_9STRA6.350e-1475.56Coatomer subunit gamma n=1 Tax=Aplanochytrium stoc... [more]
A0A7S1U574_9STRA6.360e-1475.56Hypothetical protein (Fragment) n=3 Tax=Pinguiochr... [more]
F0WG92_9STRA1.190e-1371.11Coatomer subunit gamma n=5 Tax=Albugo TaxID=65356 ... [more]
A0A662XY71_9STRA1.620e-1371.11Coatomer subunit gamma n=1 Tax=Nothophytophthora s... [more]
COPG_CAEEL1.620e-1379.55Probable coatomer subunit gamma n=13 Tax=Caenorhab... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..46
e-value: 2.2E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR10261:SF0COATOMER SUBUNIT GAMMA-2coord: 2..45
IPR017106Coatomer gamma subunitPANTHERPTHR10261COATOMER SUBUNIT GAMMAcoord: 2..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49540contigH-paniculata_contig49540:773..913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49540.12143.1mRNA_H-paniculata_contig49540.12143.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49540 773..913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49540.12143.1 ID=prot_H-paniculata_contig49540.12143.1|Name=mRNA_H-paniculata_contig49540.12143.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=47bp
QVVRRWVNEVQEAVSSQHEMVQYHALSLLYQIKAHDRLAVSKLVSC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR017106Coatomer_gsu