prot_H-paniculata_contig4952.12141.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4952.12141.1
Unique Nameprot_H-paniculata_contig4952.12141.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length496
Homology
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A6H5JA25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA25_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 8.690e-79
Identity = 127/211 (60.19%), Postives = 155/211 (73.46%), Query Frame = 0
Query:  116 KVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRTDNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKALERKAQERSTMQRERDLAAANERKRRRMARKLVDLEQAHHDNNPD-GEERAPELRLAIMYELDEFGLEELKLQLHQINILLRNIED 325
            KVP GQWYC DCR  KRV+GCNGCMQN RP EILQCDGP CGLEYH GCLDPPL  VP   WWYCP+CVRTDN+VGCRVCK DVDY  L+KCDGPGC+LEWHTYCL PP+K+VP+G F CP CKA ++       ++ E+D+A ANE++RRR ARK      +  D+ P  G      LR A++ + ++   + L+L+LH+IN LLRNIE+
Sbjct:  156 KVPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLGKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHTYCLKPPVKTVPKGDFFCPYCKAKQK-------VEFEKDIARANEKRRRREARKARATAYSDDDDQPAYGWRGVAGLRGALLAQYEDLEPDSLRLELHRINTLLRNIEE 359          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 1.920e-77
Identity = 125/213 (58.69%), Postives = 155/213 (72.77%), Query Frame = 0
Query:  114 LAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRTDNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKALERKAQERSTMQRERDLAAANERKRRRMARKLVDLEQAHHDNNPD-GEERAPELRLAIMYELDEFGLEELKLQLHQINILLRNIED 325
            ++KVP GQWYC DCR  KRV+GCNGCMQN RP EILQCDGP CGLEYH GCLDPPLD VP   WWYCP+CVRTDN+VGCRVCK DVDY  L+KCDGPGC+LEWHTYCL PP+K+VP+G F CP CKA ++   E+    R++D+A ANE++     RK      +  D+ P  G      LR A++ + ++   + L+L+LH+IN LLRNIE+
Sbjct:  536 ISKVPKGQWYCPDCREKKRVFGCNGCMQNDRPTEILQCDGPMCGLEYHYGCLDPPLDKVPSSKWWYCPDCVRTDNRVGCRVCKVDVDYDKLLKCDGPGCELEWHTYCLKPPVKTVPKGDFFCPYCKAKQKVEFEKK---RQQDIARANEKRXXXXXRKARATAYSDDDDQPAYGWRGVAGLRGALLAQYEDLEPDSLRLELHRINTLLRNIEE 745          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A7S1RUW9_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RUW9_ALECA)

HSP 1 Score: 114 bits (285), Expect = 5.660e-24
Identity = 60/154 (38.96%), Postives = 80/154 (51.95%), Query Frame = 0
Query:   88 GKGKGMVTCHYEKCAKKFHVRCLNPPLAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRT-DNQVGCRVC-KDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCK 239
            G+   MV+C  + C +  H+ C  PPLA+ P G+W+C  CR    V  C  C +   P ++L CDG  CG   H  C    L +VP+ DW +C  C R    +V C VC K DVD  LL+ C+G  C    H  C +PPL  VP   + C LC+
Sbjct:  230 GELSEMVSCAAKDCGRFCHLACSRPPLARHPEGEWFCLLCR----VRPCIVCGKRSDPAKMLLCDGDICGRVCHFRCYSKSLTEVPEGDW-HCKHCERRLSGEVSCMVCGKHDVDSPLLI-CEGERCGRACHMSCCSPPLTEVPIEPWFCALCQ 377          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A6G0XHC3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XHC3_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.310e-15
Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = 0
Query:  117 VPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRT--DNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKA 240
             PN +  CE C       G  G        E++ CD  +C   +H  CL  P D V +V+ W CP C++T  D +  CR+C  D +   ++ CD   CD E+H YCLNPPL  VPEG + CP+C +
Sbjct:  216 APNNRTQCEVC-------GKQG--------ELICCD--RCPSVFHTDCL--PRDHVVNVNPWLCPSCLQTPFDQEKACRLCAGDTNLSQIILCDC--CDDEYHLYCLNPPLLEVPEGDWFCPVCSS 320          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A024UX49_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UX49_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.660e-15
Identity = 48/130 (36.92%), Postives = 68/130 (52.31%), Query Frame = 0
Query:  114 LAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRT--DNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKAL 241
            L  + N  W      A +    C  C +      +L CD  +C   YH  CL  P D V ++D W CP C++T  D+   CR+C  D +   ++ CD   CD E+H YCLNPPL +VP+G + CP+C +L
Sbjct:  262 LMDLSNPPWTIMHPEAIRNRTQCEVCGKQGT---LLCCD--RCPSVYHADCL--PRDHVINIDPWLCPTCLQTPFDHDKACRLCAGDSNLSQIILCDC--CDDEYHMYCLNPPLITVPDGDWFCPVCASL 382          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A418B291_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B291_9STRA)

HSP 1 Score: 87.0 bits (214), Expect = 6.060e-15
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query:  155 KCGLEYHLGCLDPPLDDVPDVDWWYCPECVRT--DNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKAL 241
            +C   YH  CL  P D V ++D W CP C++T  D+   CR+C  D +   ++ CD   CD E+H YCLNPPL +VP+G + CP+C +L
Sbjct:   26 RCPSVYHADCL--PRDHVINIDPWLCPTCLQTPFDHDKACRLCAGDSNLSQIILCDC--CDDEYHMYCLNPPLITVPDGDWFCPVCSSL 110          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: T1JDG0_STRMM (Uncharacterized protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JDG0_STRMM)

HSP 1 Score: 86.7 bits (213), Expect = 4.290e-14
Identity = 52/144 (36.11%), Postives = 68/144 (47.22%), Query Frame = 0
Query:  103 KKFHVRCLNPPLAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECV--------RTDNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLC 238
            K+   + L  P A   + Q YCE C+                  EI+ CD   C   YHL CLDP L++ P+  W  CP C           D+   CRVCKD  +   L+ CD   C   +HT+CLNPPLK +P+G + CP C
Sbjct:  288 KRSKKKKLRRPRAFPTDHQDYCEVCQQGG---------------EIILCD--TCPRAYHLVCLDPELEEAPEGKW-SCPHCEGEGIQEQEEDDHMEFCRVCKDGGE---LLCCDS--CPSAYHTHCLNPPLKQIPDGEWHCPRC 408          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: UPI0006B0CB78 (chromodomain-helicase-DNA-binding protein 4-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B0CB78)

HSP 1 Score: 85.9 bits (211), Expect = 5.140e-14
Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  136 CNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRTDNQVG--------CRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLC 238
            C  C Q     EI+ CD   C   YHL CLDP L++ P+  W  CP C   D Q          CRVCKD  +   L+ CD   C   +HT+CLNPPLK++P+G + CP C
Sbjct:   72 CEVCQQGG---EIILCD--TCPRAYHLVCLDPELEEAPEGKW-SCPHCEGEDIQEQDNDEHMEFCRVCKDGGE---LLCCDS--CPSAYHTFCLNPPLKNIPDGEWHCPRC 171          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A8J2K4N4_9HEXA (Hypothetical protein n=2 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2K4N4_9HEXA)

HSP 1 Score: 84.7 bits (208), Expect = 1.750e-13
Identity = 47/125 (37.60%), Postives = 62/125 (49.60%), Query Frame = 0
Query:  125 EDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRTDNQVG-----------CRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLC 238
            ED   A+    C  C Q     EI+ CD   C   YHL CLDP +++ P+   W CP C  T+               C+VCKD  +   L+ CD   C   +HT+CLNPPLK +P+G + CP C
Sbjct:  310 EDYEQAEHQDYCEVCQQGG---EIILCD--TCPRAYHLVCLDPEMEEAPE-GRWSCPHCESTEGSKELXXXXXXXXXFCKVCKDGGE---LLCCDS--CPWAYHTFCLNPPLKEIPDGDWRCPRC 423          
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Match: A0A1I8MJF2_MUSDO (Uncharacterized protein n=4 Tax=Muscinae TaxID=43910 RepID=A0A1I8MJF2_MUSDO)

HSP 1 Score: 84.3 bits (207), Expect = 2.330e-13
Identity = 57/167 (34.13%), Postives = 79/167 (47.31%), Query Frame = 0
Query:   82 DDDSVVGKGKGMVTCHYEKCAKKFHVRCLNPPLAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQCDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPEC----------VRTDNQVGCRVCKDDVDYHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLC 238
            DD + V K K  V     K   KF  +      ++ P+G    ED     + Y C  C Q     EI+ CD   C   YHL CL+P L++ P+  W  CP C             ++Q  CR+CKD  +   L+ CD   C   +HT+CLNPPL ++P+G + CP C
Sbjct:  332 DDGTPVVKKKAKV-----KIGNKFKKKKKLKTTSRFPDG----EDGEHEHQDY-CEVCQQGG---EIILCD--TCPRAYHLVCLEPELEEPPEGKW-SCPHCEADGGAXXXXXXXEHQEFCRICKDGGE---LLCCDS--CPSAYHTFCLNPPLDTIPDGDWRCPRC 477          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4952.12141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JA25_9PHAE8.690e-7960.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPM2_ECTSI1.920e-7758.69Myst-related protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A7S1RUW9_ALECA5.660e-2438.96Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A6G0XHC3_9STRA2.310e-1538.10Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UX49_9STRA2.660e-1536.92Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A418B291_9STRA6.060e-1543.82Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
T1JDG0_STRMM4.290e-1436.11Uncharacterized protein n=1 Tax=Strigamia maritima... [more]
UPI0006B0CB785.140e-1442.34chromodomain-helicase-DNA-binding protein 4-like n... [more]
A0A8J2K4N4_9HEXA1.750e-1337.60Hypothetical protein n=2 Tax=Allacma fusca TaxID=3... [more]
A0A1I8MJF2_MUSDO2.330e-1334.13Uncharacterized protein n=4 Tax=Muscinae TaxID=439... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..326
NoneNo IPR availableCOILSCoilCoilcoord: 258..278
NoneNo IPR availableGENE3D2.30.30.1150coord: 132..186
e-value: 1.2E-12
score: 50.4
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 99..130
NoneNo IPR availablePANTHERPTHR47162:SF3coord: 136..188
coord: 192..275
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 136..188
coord: 192..275
NoneNo IPR availablePANTHERPTHR47162FAMILY NOT NAMEDcoord: 99..130
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 75..128
e-value: 1.5E-7
score: 41.0
coord: 191..239
e-value: 1.1E-9
score: 48.1
coord: 135..184
e-value: 7.7E-8
score: 42.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 187..263
e-value: 1.2E-14
score: 55.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 17..131
e-value: 2.9E-12
score: 48.7
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 136..184
e-value: 1.1E-7
score: 31.6
coord: 192..239
e-value: 2.1E-7
score: 30.7
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 189..241
score: 8.876
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 133..186
score: 8.849
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 73..130
score: 9.535
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 186..241
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 73..131
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 135..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4952contigH-paniculata_contig4952:5789..14344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4952.12141.1mRNA_H-paniculata_contig4952.12141.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4952 5789..14344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4952.12141.1 ID=prot_H-paniculata_contig4952.12141.1|Name=mRNA_H-paniculata_contig4952.12141.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=496bp
MAEVGAGGAAATVRVVKKRSKKKPRRLTGFSHKKTAAAVQQQRPPQRPKA
GGGAMGAVDLNKVEEDKLKNLLMTLCQECYLDDDSVVGKGKGMVTCHYEK
CAKKFHVRCLNPPLAKVPNGQWYCEDCRAAKRVYGCNGCMQNVRPEEILQ
CDGPKCGLEYHLGCLDPPLDDVPDVDWWYCPECVRTDNQVGCRVCKDDVD
YHLLMKCDGPGCDLEWHTYCLNPPLKSVPEGLFICPLCKALERKAQERST
MQRERDLAAANERKRRRMARKLVDLEQAHHDNNPDGEERAPELRLAIMYE
LDEFGLEELKLQLHQINILLRNIEDVDDFDPPPQAPPPGIESTAEAPPSA
DGNTNPATTTSKAEVAGMAETGVGRRDKQGDALAGDEDKNAGGEEKVAGG
AGGGSVSERQDKDQADGGGDDGAGGSGAAKGRRPLSSRRNQSLKPPVSAK
ARGVAPTNGGKNNDVRGSGGGRRAGTVAISGEGKTIGPEQASSAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD