prot_H-paniculata_contig4952.12140.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4952.12140.1
Unique Nameprot_H-paniculata_contig4952.12140.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length552
Homology
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BLAST of mRNA_H-paniculata_contig4952.12140.1 vs. uniprot
Match: D7FPM2_ECTSI (Myst-related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPM2_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 4.320e-34
Identity = 93/195 (47.69%), Postives = 129/195 (66.15%), Query Frame = 0 
Query:  264 AYPKRARNAPDVFKAGPSMKPPS------TXXXXXXXXXXXXXAQVSASANGKKGSAKKHTPAKKKVELPXXXXXXXXXYHFKYSGWPVVGGRELISVGLFINAALPVLRLGRNYEVRMRELEQAVASPRPMENSLLGMIHARLLASRKELKAMRMGEDTFTYSFWTQRLKQRLTEWYLRRSILRELIEDAERAD 452
            +YPKR RNAPDVFKAGPS KP S      T      XXXXXXX                           XXXXXXXXXY F Y GWP +GGREL++ G+F+  + P+++ GR +EV+M+ LE+A++S +P EN LL ++H+RLL + +ELKA++ GE  + YS+W +RL+++L++WY RR++LRELI +AER+D
Sbjct:  158 SYPKRIRNAPDVFKAGPSTKPMSPSKPTATTPAGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDKPEENELLSLVHSRLLCTGRELKALKPGELKYPYSWWAERLQKKLSDWYRRRAVLRELIFEAERSD 352
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BLAST of mRNA_H-paniculata_contig4952.12140.1 vs. uniprot
Match: A0A6H5JCM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM5_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.270e-33
Identity = 94/200 (47.00%), Postives = 131/200 (65.50%), Query Frame = 0 
Query:  264 AYPKRARNAPDVFKAGPSMKPPSTXXXXXXXXXXXXXAQVSASANGKKGSAKKHTPAKKKVELPXXXXXXXXX------YHFKYSGWPVVGGRELISVGLFINAALPVLRLGRNYEVRMRELEQAVASPRPMENSLLGMIHARLLASRKELKAMRMGEDTFTYSFWTQRLKQRLTEWYLRRSILRELIEDAERADSDHEL 457
            +YPKR RNAPDVFKAGPS KP S     XXXXXXXXX                           XXXXXXXXX      Y F Y GWP +GGREL++ G+F+  + P+++ GR +EV+M+ LE+A++S RP EN LL ++ +RLL + +ELKA++ GE  + YS+W +RL+++L +WY RR++LRELI +AER+D + ++
Sbjct:  157 SYPKRIRNAPDVFKAGPSTKPMSPSKPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRFDYKGWPAIGGRELLAAGMFLYVSAPMMKFGRGFEVKMQALEEALSSDRPEENELLSLVLSRLLCTGRELKALKPGELKYPYSWWAERLQKKLADWYRRRAVLRELIFEAERSDDEGDV 356
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4952.12140.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FPM2_ECTSI4.320e-3447.69Myst-related protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JCM5_9PHAE2.270e-3347.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4952contigH-paniculata_contig4952:2538..5689 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4952.12140.1mRNA_H-paniculata_contig4952.12140.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4952 2350..5689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4952.12140.1 ID=prot_H-paniculata_contig4952.12140.1|Name=mRNA_H-paniculata_contig4952.12140.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=552bp
MANGDDAPKPRPRGRPKGSGKKKQTTPSGPPSSSSSSVVSTAGSTADSRG
PGVSSGADSQVVDVAVAASTSVSVSASSNEVGKGRALANADTHLSAAASP
PKKGRGRPPSKSRKTVVVTTSAESAAIVAGSDAQGRSSTPENAAGKNGNV
SAKDEAESAKQTSSSSAGRNGSVEVSTLGPSSAGGGTGKRKDAAVVVKKS
HKKIRPAGSERTAGSRLQPRRGVKVVDPSIPGGGLSVYTPSSPRGSIENS
SSRKTQGKVCVASAYPKRARNAPDVFKAGPSMKPPSTPPSVPAKGSGKGT
AQVSASANGKKGSAKKHTPAKKKVELPPPPPPPPPPYHFKYSGWPVVGGR
ELISVGLFINAALPVLRLGRNYEVRMRELEQAVASPRPMENSLLGMIHAR
LLASRKELKAMRMGEDTFTYSFWTQRLKQRLTEWYLRRSILRELIEDAER
ADSDHELEVDLEQGSRKDSEEEEPRDDKKEQTTEGGGSEATTDVPRGGPN
ENNDAAKAEHGTTAPETMVQAGGGIGSGSGGGGVEETKGNCGDAEDTKQQ
AG
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