prot_H-paniculata_contig4951.12139.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4951.12139.1
Unique Nameprot_H-paniculata_contig4951.12139.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length568
Homology
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 3.960e-41
Identity = 80/111 (72.07%), Postives = 92/111 (82.88%), Query Frame = 0
Query:  413 NVEGGEKGSGAGKLDAMSRAREGRWELGEEESAKMLPWIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAAAA 523
            N  G +KG G    +   +  E  WELG EE+AKM PW+YLGV++HPAL+WHLHRQGFH+PTPIQ+RVLPKA+LGRKDIIGAAETGSGKTLA+GLP LSEILTRRD AAAA
Sbjct:  317 NARGEDKG-GEEAAEVGQKKSERDWELGSEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAAAA 426          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A6H5KFI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFI4_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 1.730e-39
Identity = 76/105 (72.38%), Postives = 87/105 (82.86%), Query Frame = 0
Query:  417 GEKGSGAGKLDAMSRAREGRWELGEEESAKMLPWIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAA 521
            GE   G    +   +  E  WELG EE+AKM PW+YLGV++HPAL+WHLHRQGFH+PTPIQ+RVLPKA+LGRKDIIGAAETGSGKTLA+GLP LSEILTRRD AA
Sbjct:  237 GEDEDGKEAAEVEQKKSERDWELGAEEAAKMAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFGLPVLSEILTRRDAAA 341          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: UPI0004417487 (DEAD-domain-containing protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004417487)

HSP 1 Score: 87.4 bits (215), Expect = 2.550e-14
Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 0
Query:  417 GEKGSGAGKLDAMS-RAREGRWEL-GEE-ESAKMLP-WIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTR 516
            GE+   AG   + S R  E R E  G++ +S K+LP W      +HP L+  LH QGF+ PTPIQ +V+P+A  GR D++G AETGSGKTLAYGLP L+++LTR
Sbjct:   92 GEQEDAAGSSRSASPRLSEARAEEEGDDFDSEKLLPAWHKYKDHVHPKLLRALHAQGFNSPTPIQAQVIPEAGTGR-DVVGIAETGSGKTLAYGLPVLTDLLTR 194          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A7R9YE61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE61_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.210e-13
Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 0
Query:  416 GGEKGSGAGKLDAMSRAREGRWELGEEESAKMLP--WIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAAA 522
            G  KG+ A          +   E  +E+    LP  W  LGV++HP ++  +   GF  PTPIQ  VLP+A+L R+D++GAA+TGSGKTLA+G+P +  +L  + T  A
Sbjct:   56 GDRKGASAINKQEKEDEEDVSEEKADEQEKVELPAKWEGLGVELHPTIVRGIVAAGFQAPTPIQAAVLPRALLFRQDVVGAAQTGSGKTLAFGIPLVHLLLEAKATQPA 164          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A7J7B640_9COLE (RNA helicase n=1 Tax=Lamprigera yunnana TaxID=370605 RepID=A0A7J7B640_9COLE)

HSP 1 Score: 85.1 bits (209), Expect = 1.310e-13
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 0
Query:  442 EESAKMLPWIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTA 520
            E+  K++ W   G  +HP ++  +  QGF +PT IQ+  LP A+LGR+DI+GAAETGSGKTLA+GLP ++ IL  ++ A
Sbjct:   99 EKGEKLIAWS--GFGLHPTILRAIEEQGFEQPTKIQELSLPPAVLGRRDILGAAETGSGKTLAFGLPIITGILKIKEIA 175          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: UPI001F049310 (ATP-dependent RNA helicase DDX24-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F049310)

HSP 1 Score: 82.0 bits (201), Expect = 1.120e-12
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 0
Query:  450 WIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRR 517
            W  LG+ +   +  HLH  GF +PT IQK+ +P AIL R DIIGAAETGSGKTLAYGLP L +IL  R
Sbjct:  112 WTSLGISV--TIAKHLHELGFDDPTIIQKKSIPPAILNRVDIIGAAETGSGKTLAYGLPVLQKILDMR 177          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: K0R9N0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R9N0_THAOC)

HSP 1 Score: 82.4 bits (202), Expect = 1.130e-12
Identity = 40/71 (56.34%), Postives = 48/71 (67.61%), Query Frame = 0
Query:  454 GVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAAAAS 524
            GV +H  L   LH   +  PTPIQ   LP AILGR+DI+GAA TGSGKTL+YGLP L  +L  RD +A+ S
Sbjct:  251 GVTLHETLSRGLHSLKYSYPTPIQASTLPAAILGRRDIVGAAPTGSGKTLSYGLPILQYLLDERDASASRS 321          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A2J7RKC7_9NEOP (RNA helicase n=4 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RKC7_9NEOP)

HSP 1 Score: 80.9 bits (198), Expect = 2.830e-12
Identity = 43/77 (55.84%), Postives = 53/77 (68.83%), Query Frame = 0
Query:  445 AKMLPWIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAA 521
            +KM  W  +G+ M P L   L  QGF EPT IQ + LP A+LGR+DI+GAAETGSGKTLA+G+P L  IL  R  +A
Sbjct:  132 SKMSAWHGVGI-MSPILR-ALEEQGFVEPTEIQAKTLPAAVLGRRDILGAAETGSGKTLAFGIPILHRILEDRGQSA 206          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A7S2ERE0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ERE0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.910e-12
Identity = 37/65 (56.92%), Postives = 48/65 (73.85%), Query Frame = 0
Query:  454 GVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRD 518
            GV +H ++   L  +GF  PTP+Q   LP AI+GR+DI+GAA TGSGKTLAY LP L ++LT+RD
Sbjct:  281 GVWLHLSICAGLASKGFASPTPVQASTLPAAIMGRRDIVGAAPTGSGKTLAYALPILHDLLTKRD 345          
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Match: A0A653DPW8_CALMS (RNA helicase (Fragment) n=1 Tax=Callosobruchus maculatus TaxID=64391 RepID=A0A653DPW8_CALMS)

HSP 1 Score: 77.0 bits (188), Expect = 4.330e-12
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0
Query:  427 DAMSRAREGRWELGEEESAKML-----------PWIYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSGKTLAYGLPFLSEILTRRDTAAAASDREKNSQS 532
            + ++ ++ G+  LG EES+K+             W   G+     ++  L    FH+PTPIQ    P AILGR DI+GAAETGSGKTLA+G+P L+ IL  ++  + A + +  S S
Sbjct:   78 EILTPSKCGQTNLGFEESSKIHGNTVDDPKNVEAWEGFGIPK--PILCALSELNFHQPTPIQSLTFPSAILGRCDILGAAETGSGKTLAFGIPILTGILKIKENGSNAENNDAASDS 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4951.12139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1X1_ECTSI3.960e-4172.07DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KFI4_9PHAE1.730e-3972.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00044174872.550e-1450.96DEAD-domain-containing protein n=1 Tax=Punctularia... [more]
A0A7R9YE61_9STRA1.210e-1340.37Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7J7B640_9COLE1.310e-1349.37RNA helicase n=1 Tax=Lamprigera yunnana TaxID=3706... [more]
UPI001F0493101.120e-1260.29ATP-dependent RNA helicase DDX24-like n=1 Tax=Xeni... [more]
K0R9N0_THAOC1.130e-1256.34Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A2J7RKC7_9NEOP2.830e-1255.84RNA helicase n=4 Tax=Cryptotermes secundus TaxID=1... [more]
A0A7S2ERE0_9STRA2.910e-1256.92Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A653DPW8_CALMS4.330e-1238.46RNA helicase (Fragment) n=1 Tax=Callosobruchus mac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..355
NoneNo IPR availableGENE3D3.40.50.300coord: 440..544
e-value: 1.4E-19
score: 72.0
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 340..513
NoneNo IPR availablePANTHERPTHR24031:SF25ATP-DEPENDENT RNA HELICASE DDX46-RELATEDcoord: 340..513
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..244
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 266..568
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 245..265
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 474..516
e-value: 4.7E-9
score: 36.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 456..517

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4951contigH-paniculata_contig4951:4062..8110 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4951.12139.1mRNA_H-paniculata_contig4951.12139.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4951 4062..8228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4951.12139.1 ID=prot_H-paniculata_contig4951.12139.1|Name=mRNA_H-paniculata_contig4951.12139.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=568bp
MSRKRSRGGGVLGGGGEAREGGWDALPWRAIEPPIERDDGWKGIGGEEQV
LMYTLEEISGSDYALQKDSSGGSQMVVGATSSSCTTHAPDLQGGNGVAGD
NNAVEQGKMKKKKKRKKDKASKAVATASTAVAAAATSAAKSGDSAEASVD
SMDVVQMITTTDAKTKMPSRTCVLKKKEHGGETPSANAQPCAKVTGSVNA
AATTGGEASVPIRSNSDRGEAGDTAGLETRPRRKKRRGKGTEKRAAAAAA
GAAAAAAAAAAVVVLPRITDSAAQGVTAASGDASSAGLEGEESGRDTADV
GKGLRSVEPAGTTTVSSSSVDDEGRKAVDASNASVAAATMTMEEEERGMD
KTKRELQLQGDGEDAPEGAAAAVTAVSGQKSSAGPTKMTRNQKKKLKKKI
KIKMKLQMEQEGNVEGGEKGSGAGKLDAMSRAREGRWELGEEESAKMLPW
IYLGVDMHPALMWHLHRQGFHEPTPIQKRVLPKAILGRKDIIGAAETGSG
KTLAYGLPFLSEILTRRDTAAAASDREKNSQSPEDNPAIVSLASEYNTDA
GKMKDVSNSGGGAEEGGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase