prot_H-paniculata_contig4949.12134.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4949.12134.1
Unique Nameprot_H-paniculata_contig4949.12134.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length167
Homology
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Match: D8LTF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTF3_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 2.700e-34
Identity = 84/191 (43.98%), Postives = 99/191 (51.83%), Query Frame = 0
Query:    1 MTGIAHSDGVLCCPSGCGTCGGTGCGSVPMAWVAPGEIEGTVSSDIPDGDTSGDYCCSSVRGNTTTICGV----DGGEPPCLIP--------TVTPTTSSN--STCVV--VEGIADKTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDM----NSADYCCSSAFEDPDIAVCAV----DGGEAPCII 167
            + GI  + G  CCP GCG CGG GCG V M  VAP     TV  D+P    SGDYCC+S        CG     D G PPC IP        T+ P  SSN    C +  + GI D TGTRCCP GCGMC G GCG +DM+ V P  T+  D+     S DYCC+S  +  D+  C      D G  PC+I
Sbjct:  262 IPGIMDTSGTRCCPQGCGMCGGVGCGLVDMNLVAP-----TVEGDVPIDAKSGDYCCTSGVDTRDVTCGTGTGDDEGYPPCFIPAGTGTVTATLAPEVSSNLIDNCGLPGIPGIMDATGTRCCPQGCGMCGGGGCGLIDMNLVAP--TVEGDVPIDAKSGDYCCTSGVDTRDVT-CGTGTGDDEGYPPCLI 444          
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Match: A0A6H5JLD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD2_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 9.980e-26
Identity = 73/170 (42.94%), Postives = 87/170 (51.18%), Query Frame = 0
Query:   20 CGGTGCGSVPMAWVAPGEIEGTVSSDIPDGDTSGDYCCSSVRGNTTTICGV----DGGEPPCLIP--TVTPTTSSNSTCVVVE--------GIADKTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDM----NSADYCCSSAFEDPDIAVCAV----DGGEAPCII 167
            CGG GCG V M  VAP     TV  D+P    SGDYCC+S   +    CG     D G PPC IP  TVT T +      +++        GI D +GTRCCP GCGMC G GCG VDM+ V P  T+  D+     S DYCC+S  +  D+  C      D G  PC I
Sbjct:    2 CGGPGCGLVDMNVVAP-----TVEGDVPIDAKSGDYCCTSGVDSRDVTCGTGVGDDEGYPPCFIPVGTVTATLAPEVASSLIDNCGLPDMPGIMDASGTRCCPQGCGMCGGPGCGLVDMNVVAP--TVEGDVPIDAKSGDYCCTSGVDSRDVT-CGTGTGDDEGYPPCFI 163          
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 3.820e-11
Identity = 61/168 (36.31%), Postives = 74/168 (44.05%), Query Frame = 0
Query:    8 DGVLCCPSGCGTCGGTGCGSVPMAWVAPGEIEGTVSSDIPDGD--TSGDYCCSSVRGNTTTICGVDGGEPPCLI-----PTVTPT-TSSNSTCVVVEGIADKTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDMNSADYCCSSAFEDPDIAVCAVDGGEAPCII 167
            +GV+CCP GCG CGGTGC +        G   G   S    G    SG YC  +              + PC+I     P+ TP+ T SN     VEGI D  G  CCPLGCG C G GC +   +  L           AD CC  + +  D   C  +  EAPCII
Sbjct:  280 NGVVCCPLGCGQCGGTGCNT-------SGAAAGLDGSSCCGGSIKASGKYCDET-------------NDAPCIIGSSPAPSPTPSETCSNG----VEGI-DGNGVVCCPLGCGQCGGAGCTTSGAAAGL----------GADSCCGGSIKASD-EYCD-ETNEAPCII 410          
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.540e-10
Identity = 55/168 (32.74%), Postives = 73/168 (43.45%), Query Frame = 0
Query:    8 DGVLCCPSGCGTCGGTGCGSVPMAWVAPGEIEGTVSSDIPDGDTSGDYCCSSVRGNTTTICGVDGGEPPCLIPTVTPTTSSNS-------TCVV-VEGIADKTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDMNSADYCCSSAFEDPDIAVCAVDGGEAPCII 167
            +GV+CCP GCG C G GCG+        G   G  S            CC +   +    C  D  E PC+I +   T   +S       TC    EGI D  G  CCP+GCG C G+GCG+   ++ L  E+          CC +  +   + +   D  EAPCII
Sbjct:  431 NGVVCCPIGCGQCAGDGCGTA-------GSANGLGSES----------CCGNGVKSLGLYCD-DTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGI-DGNGVVCCPIGCGQCAGDGCGTAGSANGLGSES----------CCGNGVKS--LGLYCDDTNEAPCII 567          
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 5.240e-10
Identity = 58/172 (33.72%), Postives = 70/172 (40.70%), Query Frame = 0
Query:    8 DGVLCCPSGCGTCGGTGCGSVPMAWVAPGEIEGTVSSDIPDGDTSGDYCCSSVRGNTTTICGVDGGEPPCLIPTVTPTTSSNS-----------TCVV-VEGIADKTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDMNSADYCCSSAFEDPDIAVCAVDGGEAPCII 167
            +GV+CCP GCG CGG GC +        G   G  S            CC     +    C  D  E PC+I +   T   +S           TC   +EGI D  G  CCPL CG C G GCGS   +  L GE+          CCSS     ++     D   APCII
Sbjct:  583 NGVVCCPIGCGQCGGDGCSTA-------GSANGLGSES----------CCGGGVKSLGVYCD-DTNEAPCIIGSAPDTDDVDSGISEESADDTQTCSNGIEGI-DHKGEVCCPLACGQCGGTGCGSAGSAFELDGES----------CCSSQVLAGNVY--CEDTNAAPCII 723          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4949.12134.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LTF3_ECTSI2.700e-3443.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLD2_9PHAE9.980e-2642.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JC43_9PHAE3.820e-1136.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G651_ECTSI1.540e-1032.74Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JUS5_9PHAE5.240e-1033.72MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4949contigH-paniculata_contig4949:703..2148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4949.12134.1mRNA_H-paniculata_contig4949.12134.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4949 703..2148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4949.12134.1 ID=prot_H-paniculata_contig4949.12134.1|Name=mRNA_H-paniculata_contig4949.12134.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=167bp
MTGIAHSDGVLCCPSGCGTCGGTGCGSVPMAWVAPGEIEGTVSSDIPDGD
TSGDYCCSSVRGNTTTICGVDGGEPPCLIPTVTPTTSSNSTCVVVEGIAD
KTGTRCCPLGCGMCEGNGCGSVDMSDVLPGETITNDMNSADYCCSSAFED
PDIAVCAVDGGEAPCII
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