prot_H-paniculata_contig4939.12119.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4939.12119.1
Unique Nameprot_H-paniculata_contig4939.12119.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1064
Homology
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BLAST of mRNA_H-paniculata_contig4939.12119.1 vs. uniprot
Match: D7G4N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4N6_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 1.590e-22
Identity = 61/119 (51.26%), Postives = 75/119 (63.03%), Query Frame = 0 
Query:  447 SGGGSANPLSKPRHLSLPTSTPRRAAMSPHGPAMDAALRMIEDGGMRLGIVKEEGADE------------------KGARDVAYDKQIAVPQITSLEQRRQRAKAWAKSRAGGDSHLLR 547
            S G S +   +PR L+ PT+TPRRAAMSPHG AMDAA+R++E+ G RLGIV+EE   +                  + AR+ AY  QIA P +TSLEQRRQRAKAWAKSR    + L R
Sbjct:    4 SDGDSGSNSGRPRTLARPTTTPRRAAMSPHGVAMDAAIRIVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNSSERAREAAYANQIAAPAMTSLEQRRQRAKAWAKSRRRSAALLCR 122
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BLAST of mRNA_H-paniculata_contig4939.12119.1 vs. uniprot
Match: A0A6H5KJ58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ58_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 4.870e-20
Identity = 100/271 (36.90%), Postives = 133/271 (49.08%), Query Frame = 0 
Query:  308 SVFDSASTWAGASAISLTSNNTQSVFKTPGRDSMLDATPLSAVSEH--NVELITTATTDHAXXXXXXXXXXXXXXXXXXXWTLTDNGWAKLPLTDNSNNRTPGYGGRGRKPSPAHGP---SGTAPRRNSQRWRLD------------------RENSWLSNVSGGGSANPLSKPRHLSLPTSTPRRAAMSPHGPAMDAALRMIEDGGMRLGIVKEEGADE------------------KGARDVAYDKQIAVPQITSLEQRRQRAKAWAKS 537
            S FDS +TWAGASA+S+ +       +T G  S+++ +  SA+S++  +    T A  D+A                        NG   + +T  +N R+ G      + SP+H      GT  RR  ++ + D                  R N  +S  SGG S +   +PR L  PTSTPRRAAMSPHG AMDAALRM+E+ G RLGIV+EE   +                  + AR+ AY  QIA P +TSLEQRRQRAKAWA S
Sbjct:  363 SEFDSNTTWAGASALSVATT------RTAGYSSLIETS--SALSQYPSSYRSTTAAKLDNAGVWCEESQGKNGDL----------NG---VSVTTTANRRSRG------RASPSHNLRVIGGTPARRGVRKAKPDNXXXXXXXXXRGTXXXGTRVNGKMSG-SGGDSGSNSGRPRTLVRPTSTPRRAAMSPHGVAMDAALRMVEERGARLGIVREEKEGDGXXXXXXXXXXXXXXNRSEKAREAAYANQIAAPAMTSLEQRRQRAKAWALS 605
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4939.12119.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4N6_ECTSI1.590e-2251.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ58_9PHAE4.870e-2036.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4939contigH-paniculata_contig4939:7591..12492 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4939.12119.1mRNA_H-paniculata_contig4939.12119.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4939 7382..12492 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4939.12119.1 ID=prot_H-paniculata_contig4939.12119.1|Name=mRNA_H-paniculata_contig4939.12119.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1064bp
MFSSGSENERSPRREFSRGLSLATSALGDHEGTVGPGLSPLRHAALLVSS
QIPGMSERIGAFTPNLGVGLGGSSQKQHKQQQGSSNADQAMELMTPSSPE
IRTEASFRNAEPPKSIPDTEARRSKARSHSRRSSPMAVVIGGAQDEGFLK
IGQHRNGVRATMVATAAAENHLTEFADQSLMANESRRSALRRRNSSIDDV
SSSIMRRPDIPPPHRVLPAKDGRSGREGGGGGWEEGGNLSTTHQDPNVGE
LSNGSSSTPPAGVAPTPQYSDMGSSSYASGSGPTLSEGAISSSDFSSRGP
SASAYDDSVFDSASTWAGASAISLTSNNTQSVFKTPGRDSMLDATPLSAV
SEHNVELITTATTDHASGGSVVVGGGTGDGGGGGGWTLTDNGWAKLPLTD
NSNNRTPGYGGRGRKPSPAHGPSGTAPRRNSQRWRLDRENSWLSNVSGGG
SANPLSKPRHLSLPTSTPRRAAMSPHGPAMDAALRMIEDGGMRLGIVKEE
GADEKGARDVAYDKQIAVPQITSLEQRRQRAKAWAKSRAGGDSHLLRTGA
MPNLDEHGNEVQPRRSPVFSSSGSESEIASSNGTTPARSRTSSRSSNGTT
PARSRANSRGSTGTTPARSRTNSRGSLGTTPGRSRSSRNCGRGSAHVQRG
TARTRGAIGGSGPNARLRASPPSGNSSSDSKGHRRTSSGSSGCGGGGRSQ
DGRPLGRRISGPLSSTLPKPAFAAGESGKSKGREGSVRLNGRDQLQSVGD
AMKQKNGLYKHNTGTAKSMPNMAAMLVAPLSRPIPTDSVGYWYNNPQEIE
HSRSRSRSRSRSHSATDHETSPPVQPPQMPSRSQRGRQGATRQPGGRPPS
HHRSRPYVHSQSPPIDADAEGEDPRESATSPPETVPVRARSAHGLERAKI
GGSGGGDGSGGGGHHRRNSSGPPSEEDVLAVSRSHRAAARDRLNGAASAL
PSTSRRRQSPDEGSGLDLSGSGSKSGHERRPKTRRFSATKDQGHDRATNE
GWEWTTNDMAQPAEIPVAVPNAVPVGRGREDSAVPAAVPVPVVALGGRRP
NARKLRSSSSSSSR
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