prot_H-paniculata_contig4934.12115.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4934.12115.1
Unique Nameprot_H-paniculata_contig4934.12115.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig4934.12115.1 vs. uniprot
Match: D7FWC6_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC6_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 5.510e-21
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    1 RRHQAIKRCGLFSGWDTEDIMRLARMSRVHRYPSKCVMLRQSEEPSHLHILLTGTCTVTK 60
            RR  AIK CGLF GW+ ED+MRL RMSR+HR+PSK V+L Q +EPSHLHI+L+G CTVTK
Sbjct: 1417 RRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKEPSHLHIVLSGACTVTK 1476          
BLAST of mRNA_H-paniculata_contig4934.12115.1 vs. uniprot
Match: A0A6H5K1M1_9PHAE (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1M1_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 6.050e-14
Identity = 42/102 (41.18%), Postives = 50/102 (49.02%), Query Frame = 0
Query:    1 RRHQAIKRCGLFSGWDTEDIMRLARMSRVHRYPSKCVMLRQ------------------------------------------SEEPSHLHILLTGTCTVTK 60
            RR  AIK CGLF GW+ ED+MRL RMSR+HR+PSK V+L Q                                           +EPSHLHI+L+G CTVTK
Sbjct: 1211 RRLDAIKLCGLFGGWEHEDLMRLTRMSRIHRHPSKSVLLMQRKILSQSPVYRQTLLSLLPLLRLKWMPLYVHAVPPVGPHFDAKKEPSHLHIVLSGACTVTK 1312          
BLAST of mRNA_H-paniculata_contig4934.12115.1 vs. uniprot
Match: A0A7S3XP60_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP60_HETAK)

HSP 1 Score: 52.8 bits (125), Expect = 1.740e-6
Identity = 21/60 (35.00%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    1 RRHQAIKRCGLFSGWDTEDIMRLARMSRVHRYPSKCVMLRQSEEPSHLHILLTGTCTVTK 60
            +++Q +K  G+F+GW T D++RLA M+++  +P    +++Q+ +P  L  L  G C V K
Sbjct:  141 KKYQDLKHSGVFAGWPTGDLLRLASMAQIKVFPRNTTIVQQAVQPQSLFFLTKGVCRVMK 200          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4934.12115.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FWC6_ECTSI5.510e-2170.00Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5K1M1_9PHAE6.050e-1441.18Cyclic nucleotide-binding domain-containing protei... [more]
A0A7S3XP60_HETAK1.740e-635.00Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 1..60
e-value: 2.3E-8
score: 35.7
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 11..60
score: 8.003
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 4..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4934contigH-paniculata_contig4934:11249..12192 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4934.12115.1mRNA_H-paniculata_contig4934.12115.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4934 11249..12192 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4934.12115.1 ID=prot_H-paniculata_contig4934.12115.1|Name=mRNA_H-paniculata_contig4934.12115.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
RRHQAIKRCGLFSGWDTEDIMRLARMSRVHRYPSKCVMLRQSEEPSHLHI
LLTGTCTVTK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014710RmlC-like_jellyroll
IPR000595cNMP-bd_dom
IPR018490cNMP-bd-like