mRNA_H-paniculata_contig4934.12114.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: D7FWC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWC4_ECTSI) HSP 1 Score: 264 bits (674), Expect = 1.280e-70 Identity = 317/1008 (31.45%), Postives = 442/1008 (43.85%), Query Frame = 1
Query: 7 SSSGTERENEGHFQRGDIVEARFRGKSKWFPGKIQQFHE-RPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSPSPRAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSVSVKNAVFHYSYMLSSAPTAGQPYQDTVHVETPRDRQHDATNARRISRELDQIPANDNGDKEPSVRSVSLHPAPSQVSKESSVHKQTPASEGTDSIR--QVAEGETCTAGVILTSSTS----------KPNVPTSCIAAPADASDNGLGWIAEVAQSVK-PIGSSTTPIEGIGAXXXXSSQSAAGSSLRTCSPLLPSAF----HPVSGAAFKTIPAATMIGGEGG---GGLVAGTPRTLTPVTETPPL--------------------TPKHLDWRPSKGGFENRRWGAPPPE------KTNDYKKXXXXDQNPDQNP----------------------AFVHGQRGAIDIALNNTHTTDFSQTGKAVTNINVEEVINIPHEAAPATSSQDPSTGEFPGLNEVHGEALPRGSRSHVGTGESEECSPSSQDAARITETSPEEETGRRKRGTAPSQPKDGDELPVSGQLKIKLSASPNSEEIRIERVEVSEPVSPSDGEVTSEPAPRVSL-RSSVQHRYAMEAMHLSEEVRLLKAELRAANDKTYAKLQQQERTLRKQFAAELASEKEHMMLQLCVERTASARKAQALREELEMAKRCHAEERARNEQITDKGFQ-----RPSKIIRPKSSTARPVPGQSSQQTRNSPLMSRRVGKISNTTNAYSVRG-ESSSIGRHGGTSGTPRSNADMIHSSPPXXXXXXTPLPSLTGRGCGPDASNHQLLAASRSHSRAHVGGSSALNRMAENNDDAS----RPLESXXXXXXXSMLELLVASLVSREESVQDLKSRIQDLKNPQQTGDVGDANQEGKLSDDPGRENTDYSSGNNVTD--MADNVRWHLETERREMRRKMEAMKGRVERVVGQYRHRAERAEAWAASADNRARVKAVK 2784
SS E +++G +Q D VEARF G+SKWFPGK+++ +E R G LYD+D+DDGD EE VLAGRVRR GQ P+ RAGL +DVKLARKGKGYH GTIGRVNDDGSLYVK DDGD+EWS+ + A+ Y Y S T V RD E + +D+ D + P+ S ++ + Q +S+ +++ R Q + T + + L+SS+S +D S +G+ WIA++A+SV+ P ++ P A S S VS A + ++ GGE G VA + P+T+TP + TP HL+W+P G RRWGAPPPE K + K Q P+ P A R A ++ Q KA TN+ E +I + +SQ +G P V G P ++ +S A ++ G T Q + SG + + +I + V+ ++G+ + R + RSSVQ RYA EAMHLSEEVRLL A+L AA DKT A+L QQER L +Q L E++ M L ER +SAR+ L+ E++ A+R ER R+E+ G Q R +K P T V G+ ++TR + + +A +VR SSS R T S+ D PPXXX +GR AS + + R SS L+ ++ + +E + VA S R +D + +++G G+A +E RE V+D RW LETERR+ RR++EAMKG VERVVGQ+R RAERAEA AASA+ RA+VKA++
Sbjct: 37 SSETPEPQDDGRYQPHDTVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQGPPALRAGLVVDVKLARKGKGYHPGTIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPSVGGTNTGASDGQVEARAARD-------------ENSRAEPHDDADDQL---------GPNSTSPRAAENDQPASSDRSNNTRGHQASAASTASGPLPLSSSSSFDGGAEKQSXXXXXXXXXXXXKSDQSGSGISWIADLAKSVETPTPAAQLPDPAARTDAGGKRSEAGDDSGNRGXXXXXSGLDWITELVSPLAQPSARESSSSGGEASAERGPPVATGNLSPVPITQTPAVAPDRGPSTPVATKSRPPRAVTPSHLEWKPITDGSAKRRWGAPPPEVDADKSKGGEETKTQQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPLADAPASRSATRVSAPKIALPAGQQEPKAKTNVGGESNASIA--STDTIASQGARSGGRPPTVPVAGGRTPGPEVRERDDANTQHSCDASGGATAENLGGSQDNQGTEMHAT---QQEGAASFESSGSVNATVPLPGGGAQIALPSVQKK---GVAEGQSVRGGSSRWDIIRSSVQRRYAAEAMHLSEEVRLLTAKLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINTLKGEVDAARRQLELERRRSEKAASTGGQAILSGRRAKTSPPLHHTTGSVRGR--EKTRGTVSSYEPAHCEAPDRSASTVRRPRSSSSARVSRTGPWGLSDRDAGRRCPPXXXLSLATTCPDSGRKASSAASASEGARRTIFSERLGHTSSSVLSPLSCGGSGGGGSDGKGVEYLALENILRNVLATVAEPSSSXXXXXXXXXRKRDGEQEERSGSEGEAFEELAPPPPRQRERAPAHRERAVSDGHREQASRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKALR 1012
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A6H5K1V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V4_9PHAE) HSP 1 Score: 229 bits (583), Expect = 1.480e-58 Identity = 324/1063 (30.48%), Postives = 436/1063 (41.02%), Query Frame = 1
Query: 7 SSSGTERENEGHFQRGDIVEARFRGKSKWFPGKIQQFHE-RPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSPSPRAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSVSVKNAVFHYSYMLSSAPT-AGQPYQDTVHVETPRDRQHDATNARRISRELDQIPANDNGDKEPSVRSVSLHPAPSQVSKESSVHKQTPASEGTDSIRQVAEGETCTAGVILTSSTSKPNVPTSCIAAP-ADASDNGLGWIAEVAQSVKP------IGSSTTPIEGIGAXXXXSSQSA------AGSSLRTCSPLLPSAFHPVSGAAFKTIPAATMIGGEGGGGLVAGT----PRTLTPV------------TETPP---LTPKHLDWRPSKGGFENRRWGAPPPE----KTNDYKKXXXXDQN---------------PDQN---------PAFVHGQRGAIDIALNNTHTTDFSQTGKAVTNINVEEVINIPHEAAPATSSQDPSTGEFPGLNEVHGEALPRGS-RSHVGTGESEECSPSSQDAAR----ITETSPEEETGRRKRGTAPSQPKDGDELPVSGQLKIKLSASPNSEEIRIERVEVSEPVSPSDGEVTSEPAPRVSLRSSVQHRYAMEAMHLSEEVRLLKAELRAANDKTYAKLQQQERTLRKQFAAELASEKEHMMLQLCVERTASARKAQALREELEMAKRCHAEERARNEQ--------ITDK-----------GFQRPSKIIRPKSSTARPVPGQSS--------QQTRNSPLMSRRVG------KISNTTNAYSVRGESSSIGRHGGTSGTPRSNA---------------DMIHSSPPXXXXXXTPLPSLTGRGCGPDASNHQLLAASRSHSRAHVGGSSALNRMAENNDDASRPLESXXXXXXX--SMLELLVASLVSREESVQDLKSRIQDLKNPQQTGDVGDANQEGKLSDDPGRENTDYSSGNNVTDMA-------DNVRWHLETERREMRRKMEAMKGRVERVVGQYRHRAERAEAWAASADNRARVKAVKTREERKKRRPQVA 2823
SS + + +G ++ D VEARF G+SKWFPGK+++ +E R G LYD+D+DDGD EE VLAGRVRR GQ PS AGL +D+KLARKGKGYH TIGRVNDDGSLYVK DDGD+EWS+ + A+ Y Y T AG E+ RD E ++ +D+ D + S S A S N + A +D S +G+ WIA++A+SV+ + S + G S GS L + L+ P +A ++ + EGG + G P T TP T+TPP + P HL+W+P G RRWGAPPPE K+ D K+ + PD PA A + + KA TN++ E +I A SSQ +G P V G P R H T + C SS A + + E +++G A Q SG + + P +E +I V + P V + +RSSVQ R+A EAMHLSEEVRLL A+L AA DKT A+L QQER L +Q L E++ M L ER +SAR+ AL+ E++ A+R ER R+E+ IT K G +R P+S+T R + SS ++ R SP + G K T +Y E+ GR T PRS + D PPXXXXXX + + S R S L+ ++ D + ++L ++A++ S G T+ A + RW LETERR+ RR++EAMKG VERVVGQ+R RAERAEA AASA+ RA+VKA+ R R KR P A
Sbjct: 37 SSETPKPQEDGRYRPQDAVEARFGGRSKWFPGKVRRAYEGREGRLLYDVDFDDGDEEEGVLAGRVRRPGQRPPSLSAGLVVDIKLARKGKGYHPATIGRVNDDGSLYVKLDDGDSEWSLPAQQAIPIYPYTPPLDKTNAGASDGQLAAPESARD-------------ENNRAEPHDDADDQIGPNSTSPRAAEDVPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEKQSGQNSDKNXXAEEKSDQSGSGVSWIADLAKSVETPTPVAQLSDSAARTDAGGKRSEAGDDSGNRDGGGGGSGLDWITELVSPLAQP---SARESSSSGGEASAEGGPPVAVGNLSPVPITQTPAFARGHGPSTPLATKTPPPRAVKPPHLEWKPITDGSAKRRWGAPPPEVDADKSKDGKETEPQQRQQLPNSPPRLSRSTAAPDSTRSLSTDAAPPADAPASSSAARASAPKIALPAGQREPKATTNVSDEGNASITSTAT--ISSQGARSGGRPSTVPVAGGRTPGPEVREHDDTNTQQSCDASSGATAENLGGLQDNQGTEMLATQQKGFASFQ--------SSG--SVNATVLPPAEGAQIALPPVQKKGVPEGQSVRGGSSRWDIIRSSVQRRFAAEAMHLSEEVRLLTAQLAAAEDKTQARLVQQERKLVRQMDEVLKRERDKMQALLSEERASSARRINALKGEVDAARRQLELERRRSEKVRTGTLTTITQKMCRLQPIDQAFGQERRFPGHAPESTTTRSLRATSSGGQAFLSGRRARTSPPLDPTTGSVRGREKTRGTVTSYDPAHEAP--GRSASTMRRPRSTSSARVSRTGPWGLSDRDAERRHPPXXXXXXXXXXXXXXXXXXXXXXASEGARRTISSERLGHTSPSLLSPLSCGGSDGGGGSDGKGVDYLALENILRNVLATVAEPSSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRQRERGPAHTERAVSDGHREQSSRWRLETERRDTRRRLEAMKGEVERVVGQFRARAERAEAAAASAEQRAKVKAL--RYLRSKRSPSTA 1067
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A2R5GDF6_9STRA (Cytidine deaminase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GDF6_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 6.850e-14 Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 1
Query: 25 RENEGHFQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRL--GQSSPSPRAGLTIDVKLARKGKG---YHAGTIGRVNDDGSLYVKFDDGDTEWSVS 363
R+ +G+ +RGD VEARF+G SKW+ G++ + GG +DIDYDDGD E SV A RVRRL G S L ++ + KG ++ G I RVN DGS + +DDGD E V+
Sbjct: 1032 RDEDGNVRRGDRVEARFKGGSKWYKGRVTRVGA--GGRAFDIDYDDGDKERSVPASRVRRLDSGSSRDQDDDALAEGDRVEARFKGGSKWYKGKIVRVNADGSYNIDYDDGDQERRVA 1147
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A7S2W990_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2W990_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.940e-13 Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = 1
Query: 43 FQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLGQSS---PSPRAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSVSVKN 372
F GD V+A+++G SK++ GKI + R G YDI YDDGD E+SV A R++R+ S+ P + G ++ K + G+ +++G I RVN DG+ VK+DDGD+E+ VS K+
Sbjct: 841 FDVGDSVQAKYKGGSKYYTGKITR-KNRNGS--YDIKYDDGDKEQSVPASRIKRVESSTTDDPGFQKGTRVEAKY-KGGRKWYSGVIARVNRDGTCDVKYDDGDSEYGVSNKS 949
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A7S2WUJ6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUJ6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.130e-13 Identity = 50/122 (40.98%), Postives = 69/122 (56.56%), Query Frame = 1
Query: 43 FQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSP----------SPRA------GLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSV 360
F+ GD VEAR+RG+SKWF GK+++ + R G YDI YDDGD+E V A VRR+G S SPR G ++ + + K + G + RVN DG+ + +DDGD+E V
Sbjct: 35 FREGDRVEARYRGRSKWFKGKVERVN-RDG--TYDIAYDDGDSERGVPAESVRRVGGGSDRDDRDERRALSPRRDEDFREGDRVEARYRGRSK-WFKGKVERVNRDGTYDIAYDDGDSERGV 152
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A067CHD7_SAPPC (SGF29 C-terminal domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CHD7_SAPPC) HSP 1 Score: 80.1 bits (196), Expect = 8.210e-12 Identity = 49/105 (46.67%), Postives = 61/105 (58.10%), Query Frame = 1
Query: 49 RGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSPSP-RAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSV 360
+GD+VEARF GK K+F GKI H G YDI+YDDGD E V VR L + + + G +D + KGK Y G I V+ DGSL V++DDGD E V
Sbjct: 392 KGDLVEARFGGKDKFFKGKITHVH---GDGSYDIEYDDGDEERRVDPALVRLLPTTKETKFKKGDVVDARFGGKGK-YFRGKITLVHGDGSLDVEYDDGDRETRV 492
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: T0S0C4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S0C4_SAPDV) HSP 1 Score: 80.5 bits (197), Expect = 1.340e-11 Identity = 51/123 (41.46%), Postives = 69/123 (56.10%), Query Frame = 1
Query: 1 MASSSGTERENEGHFQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSPSP--RAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTEWSVS 363
+ ++ GT R + +GD+VEARF GK K+F GKI H G +DI+YDDGD E V VR +SS P + G ++ + K K Y G I V+ DGSL V++DDGD E V+
Sbjct: 1203 LPTTKGTPRSK---WAKGDLVEARFGGKDKYFKGKITHVH---GDDSHDIEYDDGDEERRVDPALVRLPAKSSTKPQFKKGDLVEARFGGKDK-YFKGKIAHVHSDGSLDVEYDDGDRETRVA 1318
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A7S3XTE2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTE2_HETAK) HSP 1 Score: 73.6 bits (179), Expect = 1.640e-11 Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 1
Query: 52 GDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLG---------QSSPSPRAGLTIDVKLARKGKG---YHAGTIGRVNDDGSLYVKFDDGDTEWSVSVK 369
G VEAR++GKSK++PG I + R GG +DIDYDDG+ E+ V A VR +G PR L + K+ + KG Y+ G I RV +G+ + +DDG+ E V+ +
Sbjct: 23 GSKVEARYKGKSKYYPGVISRV--RFGGEAFDIDYDDGEQEKGVKADLVRAVGGXXXXXXMETEDERPRGKLKVGSKVEARYKGKSKYYPGVIARVRLNGTYDIDYDDGEQEKGVAAE 138
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A1V9YV67_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YV67_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 7.750e-11 Identity = 41/101 (40.59%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 52 GDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRL-GQSSPSPRAGLTIDVKLARKGKGYHAGTIGRVNDDGSLYVKFDDGDTE 351
G VEA+++ +K++PGKI + H G YDI++DDGD + V A VR + +S+ S + G ++ K KGK Y+ G I +VN DGS +++DDG++E
Sbjct: 130 GTRVEAKYKNTNKFYPGKITKVHTSSG--TYDIEFDDGDVDTKVQASDVRPIESKSTKSFKVGTEVEAKY--KGKTYYPGKIAKVNGDGSYDIEYDDGESE 226
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Match: A0A7S2REE1_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2REE1_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 1.000e-10 Identity = 51/137 (37.23%), Postives = 71/137 (51.82%), Query Frame = 1
Query: 13 SGTERENEGHFQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIDYDDGDAEESVLAGRVRRLGQSSPSPRAGLTI--------DVKLARK---------GKGYHAGTIGRVNDDGSLYVKFDDGDTEWSVSVKN 372
+G E +++ RGD VEAR++G SK++ GKI + + YDI YDDGD+E V A VRRLG + S R G D L R G ++ G I RVN +GS + +DDGD+E V ++
Sbjct: 717 AGEEEDDDDPLGRGDRVEARYKGGSKFYKGKISRVNVNGS---YDISYDDGDSERGVKARDVRRLGGGNKSARMGRGTSPRDEEDEDTPLGRGDRVEARYKGGSKFYKGKISRVNVNGSYDISYDDGDSERGVKARD 850 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4934.12114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4934.12114.1 >prot_H-paniculata_contig4934.12114.1 ID=prot_H-paniculata_contig4934.12114.1|Name=mRNA_H-paniculata_contig4934.12114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=942bp MASSSGTERENEGHFQRGDIVEARFRGKSKWFPGKIQQFHERPGGFLYDIback to top mRNA from alignment at H-paniculata_contig4934:3167..7396+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4934.12114.1 ID=mRNA_H-paniculata_contig4934.12114.1|Name=mRNA_H-paniculata_contig4934.12114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4230bp|location=Sequence derived from alignment at H-paniculata_contig4934:3167..7396+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4934:3167..7396+ >mRNA_H-paniculata_contig4934.12114.1 ID=mRNA_H-paniculata_contig4934.12114.1|Name=mRNA_H-paniculata_contig4934.12114.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5652bp|location=Sequence derived from alignment at H-paniculata_contig4934:3167..7396+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |