mRNA_H-paniculata_contig4932.12113.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: D8LMV3_ECTSI (Cyclin-dependent kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMV3_ECTSI) HSP 1 Score: 508 bits (1308), Expect = 2.470e-171 Identity = 241/259 (93.05%), Postives = 255/259 (98.46%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDKT 777
+RIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQM++GLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNE+VWPNVTDLQDWNPGFPTW++L+LAHR+ G+D+ GLDLL+KLLYYDPK+R+SAKRAL H +FDDLDKT
Sbjct: 38 KRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMVRGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEEVWPNVTDLQDWNPGFPTWKRLNLAHRSQGMDKCGLDLLEKLLYYDPKKRISAKRALEHAFFDDLDKT 296
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A6V2WZ43_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2WZ43_HETAK) HSP 1 Score: 445 bits (1145), Expect = 5.820e-147 Identity = 210/260 (80.77%), Postives = 234/260 (90.00%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDKTA 780
+RIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEG+LYL+FEFVDRDLKKYMEA GMLD MLVKSYL+Q I+GLE+CHARGVMHRD+KPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYR PEILLG+QTYAPPVD+WA GTILVEM TKRPLFPGDSE+DE++KIF+LLGTP E+ +P VT+L DWNP FP W +L L P L E GLD+L++LL YDP+ R+SA+RA+ HPYFDDLDK A
Sbjct: 37 KRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGRLYLVFEFVDRDLKKYMEAHVGMLDAMLVKSYLYQCIRGLEYCHARGVMHRDMKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILLGSQTYAPPVDMWACGTILVEMATKRPLFPGDSEVDELFKIFRLLGTPTEETYPGVTNLPDWNPSFPMWPRLKLTKCAPDLCENGLDILKQLLAYDPRERISARRAMNHPYFDDLDKEA 296
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A6U4L5Y8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L5Y8_9STRA) HSP 1 Score: 434 bits (1115), Expect = 1.770e-142 Identity = 196/260 (75.38%), Postives = 230/260 (88.46%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDKTA 780
+RIRLEVEDEGIPSTALREISLLRELQHPN+V L+DCVQ +GKLYL+FEFVD+DLKKYME+T +LDPMLVKSY FQ+ +GL FCH+RGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYR PEIL+G+QTYAPPVD+WA+G IL E TKRP PGDSEIDE++KIF++ GTPNE+VWP T LQDWNP FP W +L+++ PGL+E G+DLL++++ YDP+ R+SAK A+ HPYFDDL+K A
Sbjct: 37 KRIRLEVEDEGIPSTALREISLLRELQHPNVVMLRDCVQDDGKLYLVFEFVDKDLKKYMESTSALLDPMLVKSYAFQICRGLAFCHSRGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILMGSQTYAPPVDVWAIGAILAECTTKRPFLPGDSEIDELFKIFRIFGTPNEEVWPGCTALQDWNPAFPNWPRLNVSKFVPGLEEAGVDLLKEMMRYDPRERISAKAAMAHPYFDDLEKEA 296
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A6U4LK02_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4LK02_9STRA) HSP 1 Score: 435 bits (1119), Expect = 2.540e-142 Identity = 197/260 (75.77%), Postives = 230/260 (88.46%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDKTA 780
QRIRLEVEDEGIPSTALREISLLRELQHPN+V L+DCVQ +GKLYL+FEFVD+DLKKYME+T +LDPMLVKSY FQ+ +GL FCH+RGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYR PEIL+G+QTYAPPVD+WA+G IL E TKRP PGDSEIDE++KIF++ GTPNE+VWP T LQDWNP FP W +L+++ PGL+E G+DLL++++ YDP+ R+SAK A+ HPYFDDL+K A
Sbjct: 86 QRIRLEVEDEGIPSTALREISLLRELQHPNVVMLRDCVQDDGKLYLVFEFVDKDLKKYMESTSALLDPMLVKSYAFQICRGLAFCHSRGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILMGSQTYAPPVDVWAIGAILAECTTKRPFLPGDSEIDELFKIFRIFGTPNEEVWPGCTALQDWNPAFPNWPRLNVSKFVPGLEEAGVDLLKEMMRYDPRERISAKAAMAHPYFDDLEKEA 345
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A7S2XRX9_9STRA (Hypothetical protein n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2XRX9_9STRA) HSP 1 Score: 433 bits (1114), Expect = 3.970e-142 Identity = 205/259 (79.15%), Postives = 226/259 (87.26%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRT-PGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDK 774
+RIRLEVEDEGIPSTALREISLLREL H NIVELKDCVQS+GKLYL+FEF+DRDLKKYME GMLDPMLVKSYLFQM +GL FCHARGVMHRDLKPQNLLVSRDG+LKLADFGLARAFCPPIRPLTHEVVTLWYR PEILLG+QTYAPPVD+WA+G I VEMVTKRPLFPGDSEID++YKIF+ LGTPNE VWP VT LQDWNP FP W K + + +D GLDLL+K + Y PK R++AK +L HPYF+DLDK
Sbjct: 49 KRIRLEVEDEGIPSTALREISLLRELSHDNIVELKDCVQSDGKLYLVFEFLDRDLKKYMEGCAGMLDPMLVKSYLFQMCRGLAFCHARGVMHRDLKPQNLLVSRDGRLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILLGSQTYAPPVDVWAIGAIFVEMVTKRPLFPGDSEIDQLYKIFRQLGTPNEQVWPGVTQLQDWNPAFPIWYKSAYGNNVLSNMDRNGLDLLEKFMLYSPKDRITAKDSLNHPYFEDLDK 307
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A6T8GAM9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8GAM9_9STRA) HSP 1 Score: 429 bits (1102), Expect = 1.660e-140 Identity = 205/259 (79.15%), Postives = 223/259 (86.10%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHR-TPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDK 774
+RIRLEVEDEGIPSTALREISLLREL H N+VELKDCVQSEGKLYL+FEF+D+DLKKYM++ GML PMLVKSYLFQM +GL FCHARG+MHRDLKPQNLLVSRDG+LKLADFGLARAFCPPIRPLTHEVVTLWYR PEILLG+QTYAPP+D+WA+G I EMV KRPLFPGDSEID++YKIF+ LGTPNEDVWP VT LQDWN FPTW K S + T L E GLDLL L Y P RVSAK AL HPYFDDLDK
Sbjct: 38 KRIRLEVEDEGIPSTALREISLLRELNHENVVELKDCVQSEGKLYLVFEFLDKDLKKYMDSCSGMLSPMLVKSYLFQMYRGLAFCHARGIMHRDLKPQNLLVSRDGRLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILLGSQTYAPPMDVWAIGAIFAEMVMKRPLFPGDSEIDQLYKIFRQLGTPNEDVWPGVTQLQDWNASFPTWHKSSFSRTVTDDLSEDGLDLLVTSLVYTPNDRVSAKEALNHPYFDDLDK 296
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A1E7FY56_9STRA (Cell division control protein n=4 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FY56_9STRA) HSP 1 Score: 426 bits (1096), Expect = 1.260e-139 Identity = 198/259 (76.45%), Postives = 229/259 (88.42%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHR-TPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDK 774
+RIRLEVEDEGIPSTALREISLLREL+H N+VEL DCVQ EGKLYL+FEF+D+DLKKYMEA G++ P+LVKSYLFQ+ +GL FCHARGVMHRDLKPQNLLV++DG+LKLADFGLARAFCPPIRPLTHEVVTLWYR PEILLG+QTYAPPVD+WA+G I VEMVTKRPLFPGDSEID++YKIF+LLGTPNE+ WP VT L DWN FPTW+K+ + T LD G+DLL++ L+YDPK R++AK +L HPYFDDLDK
Sbjct: 37 KRIRLEVEDEGIPSTALREISLLRELKHENVVELMDCVQEEGKLYLVFEFLDKDLKKYMEACSGLITPILVKSYLFQICRGLAFCHARGVMHRDLKPQNLLVTKDGRLKLADFGLARAFCPPIRPLTHEVVTLWYRPPEILLGSQTYAPPVDVWAIGAIFVEMVTKRPLFPGDSEIDQLYKIFRLLGTPNEESWPGVTHLPDWNAAFPTWKKVPYSKGVTEHLDNVGMDLLERFLFYDPKERITAKDSLNHPYFDDLDK 295
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A835YM94_9STRA (Cyclin-dependent kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM94_9STRA) HSP 1 Score: 426 bits (1095), Expect = 1.710e-139 Identity = 197/258 (76.36%), Postives = 224/258 (86.82%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDK 774
+RIRLEVEDEGIPSTALREISLLRELQHPNIV+L+DC+QSEGKLYLIFEFVDRDLKKY+EA G+LD V+S+ Q++ GLEFCHARGVMHRDLKPQNLLVSR+G+LKLADFGLARAFCPP+RPLTHEVVTLWYR PEILLG YAPPVDLWAVG ILVEMVTKRPLFPGDSE+DE++KIFQ++GTP ED WP VT LQDWNP FP W + L+ PGL+ GLDLL++LL Y P +R+SAK+AL HPYFD +
Sbjct: 38 KRIRLEVEDEGIPSTALREISLLRELQHPNIVQLRDCIQSEGKLYLIFEFVDRDLKKYLEAAAGLLDASRVRSFAHQLLAGLEFCHARGVMHRDLKPQNLLVSREGRLKLADFGLARAFCPPLRPLTHEVVTLWYRPPEILLGAHVYAPPVDLWAVGAILVEMVTKRPLFPGDSEVDELFKIFQVMGTPTEDTWPGVTGLQDWNPAFPVWPRKLLSVYAPGLNAAGLDLLERLLVYSPSKRISAKKALAHPYFDGFSE 295
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A7S2LML1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LML1_9STRA) HSP 1 Score: 426 bits (1095), Expect = 3.610e-139 Identity = 202/261 (77.39%), Postives = 226/261 (86.59%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRT-PGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDKTA 780
+RIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEG+LYL+FEF+D D KKYM++ QGML PML KSYLFQ +GL +CHARGVMHRDLKPQNLLVSRDG LKLADFGLAR+FCPPIRPLTHEVVTLWYR PEILLG+ TYAPP+D+WA+GTI EMVTKRPLFPGDSEID+I+KIF+LLGTP EDVWP VT LQDWN FP W+K + LD G++LL+K L +DPKRR+SAK +L HPYFDDLDK A
Sbjct: 57 KRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGRLYLVFEFLDMDFKKYMDSCQGMLSPMLCKSYLFQCCRGLAYCHARGVMHRDLKPQNLLVSRDGVLKLADFGLARSFCPPIRPLTHEVVTLWYRPPEILLGSPTYAPPMDVWAIGTIFSEMVTKRPLFPGDSEIDQIFKIFRLLGTPTEDVWPGVTHLQDWNAAFPIWRKAPYSRTLRENLDHCGIELLEKFLAFDPKRRISAKDSLNHPYFDDLDKEA 317
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Match: A0A7R9UGM7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGM7_9STRA) HSP 1 Score: 424 bits (1090), Expect = 9.530e-139 Identity = 196/258 (75.97%), Postives = 222/258 (86.05%), Query Frame = 1
Query: 1 QRIRLEVEDEGIPSTALREISLLRELQHPNIVELKDCVQSEGKLYLIFEFVDRDLKKYMEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLKLADFGLARAFCPPIRPLTHEVVTLWYRAPEILLGTQTYAPPVDLWAVGTILVEMVTKRPLFPGDSEIDEIYKIFQLLGTPNEDVWPNVTDLQDWNPGFPTWQKLSLAHRTPGLDEFGLDLLQKLLYYDPKRRVSAKRALVHPYFDDLDK 774
+RIRLEVEDEGIPSTALREISLLRELQHPN+V LKDCVQ +GKLYL+FEFVD+DLKKYME+T LDP LVKSY +Q+ +GL FCH+RGVMHRDLKPQNLLVS+DGKLK+ADFGLARAFCPPIRPLTHEVVTLWYR PEILLG QTYAPPVD+WAVG IL E TKRP PGDSEIDE++KIF++ GTPNED+WP VT+LQDWNP FP W L++A PGL E G+DLL + YDP+ R+SAK A+ HPYFD LDK
Sbjct: 37 KRIRLEVEDEGIPSTALREISLLRELQHPNVVMLKDCVQDDGKLYLVFEFVDKDLKKYMESTGAPLDPELVKSYTYQICRGLTFCHSRGVMHRDLKPQNLLVSKDGKLKIADFGLARAFCPPIRPLTHEVVTLWYRPPEILLGCQTYAPPVDVWAVGAILAECTTKRPFLPGDSEIDELFKIFRIFGTPNEDMWPGVTELQDWNPSFPVWPSLNVAKFVPGLCEAGIDLLTLTMKYDPRERISAKAAMSHPYFDSLDK 294 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4932.12113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4932.12113.1 >prot_H-paniculata_contig4932.12113.1 ID=prot_H-paniculata_contig4932.12113.1|Name=mRNA_H-paniculata_contig4932.12113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp MEATQGMLDPMLVKSYLFQMIKGLEFCHARGVMHRDLKPQNLLVSRDGKLback to top mRNA from alignment at H-paniculata_contig4932:3146..12400- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4932.12113.1 ID=mRNA_H-paniculata_contig4932.12113.1|Name=mRNA_H-paniculata_contig4932.12113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9255bp|location=Sequence derived from alignment at H-paniculata_contig4932:3146..12400- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4932:3146..12400- >mRNA_H-paniculata_contig4932.12113.1 ID=mRNA_H-paniculata_contig4932.12113.1|Name=mRNA_H-paniculata_contig4932.12113.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig4932:3146..12400- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |