mRNA_H-paniculata_contig4929.12106.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4929.12106.1
Unique NamemRNA_H-paniculata_contig4929.12106.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: D7FRF8_ECTSI (DLH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF8_ECTSI)

HSP 1 Score: 329 bits (844), Expect = 1.610e-108
Identity = 152/245 (62.04%), Postives = 187/245 (76.33%), Query Frame = 3 
Query:   93 MASSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGSGPKSLIVAYDIFGYSSQTKQVCDKLATAGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMG--SESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            MAS+ACCAAGPPV  DYTPKGT+SK+GD+DTYF+GSGPK+L+V YDIFG+S Q KQVCD  A AG+NVAMPDF KG PW L+NFPPKDR EL AW  ++G W T + P     ++HMK  +GAE  G  GFCWGG + M+AA++   +E G+ A   VHPAML+ E+A +VKVP+LIMPS ++PD  P+KE LDKK FG+KC+  RFDDMHHGFC+ARGDWA   QA RA+EAI  F KF+  +L
Sbjct:    1 MASAACCAAGPPVACDYTPKGTISKIGDVDTYFVGSGPKALVVVYDIFGFSPQLKQVCDMFAAAGFNVAMPDFCKGNPWPLENFPPKDRSELGAWFGTTGKWETSIRPTFIPAVAHMKEHRGAEVVGVTGFCWGGMIAMKAASLDPDAEGGVKAGGTVHPAMLSAELAQDVKVPVLIMPSGEDPDHLPVKEVLDKKPFGDKCQYRRFDDMHHGFCAARGDWANAVQATRAAEAIDAFVKFYTANL 245
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A835Z8A5_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A5_9STRA)

HSP 1 Score: 282 bits (722), Expect = 3.840e-90
Identity = 131/243 (53.91%), Postives = 173/243 (71.19%), Query Frame = 3 
Query:   93 MASSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGSGPKSLIVAYDIFGYSSQTKQVCDKLATAGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            MAS ACC AGPP++ DY PKGT++ +GD + YF GSGP+++ + YDIFG S Q KQVCDKLA AG++VAMPDF +G+PW+L+NFPPKD+ E +AW+    D+  V+ P    V +HM+   GA+ FG +GFCWGG +  +AA   ++  + A A VH A +TPE+   V VP+ ++PS D+PD APLKE LDKK FG  C  HRF+DMHHGFC+ARGDW+ P  A RASEA+ +   F D +L
Sbjct:    1 MASPACCKAGPPISSDYEPKGTIATIGDQEVYFSGSGPRAICIVYDIFGLSPQAKQVCDKLADAGFSVAMPDFARGQPWLLENFPPKDQGEFMAWVGKH-DFDAVIRPDMERVQAHMRETMGAKVFGAIGFCWGGSIATKAAC--AQGLVAAGAAVHYAFITPELVEGVCVPLCLLPSGDDPDTAPLKEVLDKKPFGAACVYHRFEDMHHGFCAARGDWSQPLIAQRASEAVAMLSDFMDKNL 240
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A1Y1Y5T6_9FUNG (Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y5T6_9FUNG)

HSP 1 Score: 209 bits (533), Expect = 8.230e-62
Identity = 111/245 (45.31%), Postives = 145/245 (59.18%), Query Frame = 3 
Query:   96 ASSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIG--SGPKSLIVAYDIFGYSSQTKQVCDKLATA-GYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            A+ ACC+  PPV  DY PKG++ K+ D+  YF+G     K+++V YDIFG+   TKQ CD L     + VA+PDFF+GKPW      P+DR  L+ WI S G W     P    V  H+ S  G+  FG +GFCWG KM + A   GS S   A + +HP++L  E A   + P+L++PSKDEPD     E L KK FG KC  H FDDMHHGF +ARGD+  P    R +EAI L   FF +++
Sbjct:    3 ANKACCSL-PPVVSDYQPKGSIEKIDDLSVYFVGPKDAKKAVVVIYDIFGFHPNTKQFCDILGEKFNFRVALPDFFRGKPWDHTRMTPEDRPALMQWITSVGSWDNTK-PDLEKVKKHLSSS-GSTDFGVVGFCWGAKMGVLATRDGSFS---AASLIHPSLLADEDAELAEAPILLIPSKDEPDLTKFVEILKKKSFGSKCSYHLFDDMHHGFAAARGDYNDPANVKRTTEAIQLTGDFFQNNV 241
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A1D2MEH3_ORCCI (Putative AIM2 family protein C30D10.14 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2MEH3_ORCCI)

HSP 1 Score: 200 bits (508), Expect = 5.200e-58
Identity = 113/244 (46.31%), Postives = 144/244 (59.02%), Query Frame = 3 
Query:  105 ACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGSGPKS----LIVAYDIFGYSSQTKQVCDKLATAG-YNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            ACC   PPV+ DY  +G+   +GD D     +  KS    LI AYDIFGY   TKQ  D+L + G + VAMPDFF+GKP+ LDNFPPKD  E++ +++++G W  VV      V+ H K E GA +FG  GFCWGGKM ++   +     I A A +HPA +    A   K P+L  PSKDEPD  PL E + K+   E    HRFDDM HGF +ARGDW + +Q  RA +AI L   FF   L
Sbjct:    6 ACCTL-PPVSSDYQAQGSEFTLGD-DLKIYETKNKSPKIVLICAYDIFGYHPNTKQFADQLNSCGIFRVAMPDFFRGKPFSLDNFPPKDPSEIMNFVSTTGSWDDVVKKDLQNVIEHYKKE-GAVSFGIFGFCWGGKMSIKG--VSEVDDIKAAALLHPAFVDTSDAEAAKGPVLFCPSKDEPDMLPLYEIVKKRLGEENAEHHRFDDMFHGFAAARGDWKVEDQRKRADQAIALVHNFFKKHL 244
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A261XW89_9FUNG (DLH domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XW89_9FUNG)

HSP 1 Score: 197 bits (500), Expect = 6.890e-57
Identity = 104/245 (42.45%), Postives = 147/245 (60.00%), Query Frame = 3 
Query:   96 ASSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGS--GPKSLIVAYDIFGYSSQTKQVCDKLATAG-YNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            +  ACC+  PPV  +Y   GT+ ++GD+D Y +GS    +++IV YD++G+   TKQ CD+LA AG   VAMPDFF+GKPW+  N    +R+ LV W+   G      +P   AV S M  ++G    G +GFCWG K+ +QA   G      A A +HP+ ++ + A   + P++++ +KDEPD     E+L  K FG KC   RF+DMHHGF +ARGDW   EQ  RA+EAI L   FF ++L
Sbjct:    5 SEQACCSI-PPVDSNYKAVGTVKRLGDMDVYMVGSTTSNRAIIVLYDVYGFHKNTKQFCDRLAEAGNVQVAMPDFFRGKPWLASN--AGNREALVKWVTQVGT-REKCMPDLNAVKS-MLQKQGVNQIGLVGFCWGAKIAVQAT--GESKDYAAAALIHPSFISIDDAKSAQAPVMVLATKDEPDMTEYMEQLYAKPFGSKCTFTRFEDMHHGFAAARGDWENKEQNKRATEAIRLTVDFFRNNL 242
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A1X2HGG9_SYNRA (Alpha/Beta hydrolase protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HGG9_SYNRA)

HSP 1 Score: 192 bits (489), Expect = 3.240e-55
Identity = 106/244 (43.44%), Postives = 132/244 (54.10%), Query Frame = 3 
Query:   99 SSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIG--SGPKSLIVAYDIFGYSSQTKQVCDKLAT-AGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            S ACC   P     Y P G +  VGD+  Y +G     KS+ V YDIFG+   TKQ CD LA   GY V MPDFF+G+PW      P D   L+ W+   G    VVLP   AV   +K + G    G +GFCWG K+ +QA A  S  G  + + +HP+ +  + A E   P+L +PSKDEPD       L KK FG  C  HRFDDMHHGF +ARGDW       RA+EA+ L   FF  +L
Sbjct:    4 SKACCTIPPVEGSTYEPTGVIENVGDLPVYVVGPKDAKKSVFVIYDIFGFHVNTKQFCDVLANRCGYRVVMPDFFRGEPWSPAKMTPADMPSLMEWVGKVGT-IDVVLPQLQAVRDWIKPQ-GVNQAGIVGFCWGAKIAVQATAKDSFFG--SASLIHPSFVDTKDAEEAGAPILAIPSKDEPDMTEYMAVLAKKPFGNLCEHHRFDDMHHGFAAARGDWNDEVNKKRATEAVQLTANFFKATL 243
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A1Y1Y9J4_9FUNG (DLH domain-containing protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y9J4_9FUNG)

HSP 1 Score: 191 bits (486), Expect = 8.740e-55
Identity = 105/246 (42.68%), Postives = 143/246 (58.13%), Query Frame = 3 
Query:   99 SSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGSGPK----SLIVAYDIFGYSSQTKQVCDKLATA-GYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            + ACC+  P VT DYTPKGT+ ++ D+  YF+G  PK    S+IV YDIFG+   T Q CD L     + VAMPDFF+GKPW  +    +D   L  WI S  +W  +V P    V   + SE G    G +GFCWG KM + A     +S   A + +HP++   E A   + P++++ +KDEPDF      L KK FG+KC  +RF+DM HGF +ARGD+  P    RA+EAI L  KFF +++
Sbjct:    4 NKACCSLRP-VTSDYTPKGTIEQIDDLPVYFVG--PKDAKLSIIVNYDIFGFHPNTHQFCDILGEMFNFRVAMPDFFRGKPWDENKMAKEDMPALYEWIRSVANWD-LVRPDLEKVKQRLASE-GIVKSGIVGFCWGAKMAILAT---RDSSFAAASLIHPSLFEDEDAVHAQAPLMLISTKDEPDFTEFMNILSKKPFGDKCHHYRFEDMFHGFAAARGDYTDPHNVKRATEAIELTGKFFTNNI 241
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: L8H284_ACACA (Dienelactone hydrolase family protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H284_ACACA)

HSP 1 Score: 190 bits (483), Expect = 2.430e-54
Identity = 105/240 (43.75%), Postives = 143/240 (59.58%), Query Frame = 3 
Query:  105 ACCAAGPPVTIDYTPKGTMSKVGDIDTYFIG-SGPKSLIVA-YDIFGYSSQTKQVCDKLATAGY-NVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKD--FGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFF 809
            ACC+  PPV  +Y P+G++ +VG I+ Y +G S  K+ IV  YDIFG+ + TKQ CD +A+A +  V +PDFF+G PW  +     DR EL+ WI + G W  +  P   A  +  + E GA+     GFCWG KM   AA  GS     A A +HP+  TP+ A  ++VP++ +P+KDEPD  P  E L +      EK    RFDD+HHGFC+ARGDW+   QA RA+EAI L   F+
Sbjct:    6 ACCSL-PPVKSEYAPQGSVVEVGGIEVYSVGPSDAKAAIVGIYDIFGFHNNTKQFCDLVASATHARVLLPDFFRGAPWTAEKLETHDRSELLKWIGTEGSWEKIQ-PSLAATTAFAQKE-GAQKIALFGFCWGAKMAWHAAQDGST--YAAAAFIHPSFFTPDDAKFLQVPIINLPTKDEPDMVPYMEALKEASPALHEKSEHKRFDDVHHGFCAARGDWSDELQAQRANEAIKLVANFY 240
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BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A261XVA5_9FUNG (DLH domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XVA5_9FUNG)

HSP 1 Score: 189 bits (481), Expect = 4.140e-54
Identity = 105/243 (43.21%), Postives = 150/243 (61.73%), Query Frame = 3 
Query:  102 SACCAAGPPVTIDYTPKGTMSKVGDIDTYFIG-SGPKS-LIVAYDIFGYSSQTKQVCDKLAT-AGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL 821
            SACC   PPV  DY+PKG + ++ D+D Y +G  G K+ ++V YDIFG+   TKQ  D+LA  +  NV MPDFF+GKP+   +    D+++L++W+ S+G    ++  +  A   +   + GA + G +GFCWG K+  QA A  S  G  A A +HP+    E A +   PML++P+KDEPD       L  K FG+KC+  RFDD+HHGF +ARGDW+   QA RA++AI L  KFF++ L
Sbjct:    2 SACCTI-PPVKSDYSPKGEIFQIEDMDVYTVGPKGTKTAILVIYDIFGFHPNTKQFADRLAEHSKVNVIMPDFFRGKPFTEQDLA--DKEKLMSWVQSAGSIKGMMPDL--AKCKNFLQQDGAVSAGVVGFCWGAKIASQATAEDSFWG--AAALIHPSFPAKEDAEKAGGPMLVIPTKDEPDMTEYMNALKAKPFGDKCKHERFDDVHHGFAAARGDWSDETQAKRATQAIDLTSKFFNEHL 237
[Close]
BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Match: A0A507BTB7_9FUNG (DLH domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507BTB7_9FUNG)

HSP 1 Score: 188 bits (477), Expect = 1.830e-53
Identity = 98/244 (40.16%), Postives = 141/244 (57.79%), Query Frame = 3 
Query:  111 CAAGPPVTIDYTPKGTMSKV--GDIDTYFIGSGPKSLIVAYDIFGYSSQTKQVCDKLATAGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSGDWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGIVATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKCRLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL*STKI 836
            C   PP   DY P G+  +V   D+  Y +GS  K + VAYD+ G +  TKQ  D LA+ G+   MPDF++G  W  +N    DR +L+AW++  G W  V   +TT  +  +   +G E++GF+GFCWGGKM M A+ +    G  AT   HPA +T E A +   P+L++PS  E D  P+ + L+ K +G K +  RFDDMHHG+CSAR D + P+ A R ++A+ L   FF   L  +K+
Sbjct:    9 CGTLPPFQTDYKPVGSTKQVPNSDLIYYDVGSSKKVIFVAYDVMGMNDNTKQTVDTLASKGFRCVMPDFYRGDGWKPEN----DRSQLMAWVSKVGTWDIVSRDLTT--LKPILDSEGTESYGFVGFCWGGKMAMHASTLSWMKGTCAT---HPAWITEEDAEKSTCPVLLLPSNGEADMTPVYKVLETKPWGNKSQHVRFDDMHHGWCSARADHSNPKNARRTADAVQLMVNFFSAVLAGSKL 243
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4929.12106.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRF8_ECTSI1.610e-10862.04DLH domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z8A5_9STRA3.840e-9053.91Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
A0A1Y1Y5T6_9FUNG8.230e-6245.31Alpha/beta-hydrolase n=1 Tax=Basidiobolus meristos... [more]
A0A1D2MEH3_ORCCI5.200e-5846.31Putative AIM2 family protein C30D10.14 n=1 Tax=Orc... [more]
A0A261XW89_9FUNG6.890e-5742.45DLH domain-containing protein n=1 Tax=Bifiguratus ... [more]
A0A1X2HGG9_SYNRA3.240e-5543.44Alpha/Beta hydrolase protein n=1 Tax=Syncephalastr... [more]
A0A1Y1Y9J4_9FUNG8.740e-5542.68DLH domain-containing protein n=1 Tax=Basidiobolus... [more]
L8H284_ACACA2.430e-5443.75Dienelactone hydrolase family protein n=1 Tax=Acan... [more]
A0A261XVA5_9FUNG4.140e-5443.21DLH domain-containing protein n=1 Tax=Bifiguratus ... [more]
A0A507BTB7_9FUNG1.830e-5340.16DLH domain-containing protein n=1 Tax=Synchytrium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4929contigH-paniculata_contig4929:8771..14446 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.3
Seed ortholog evalue3.9e-88
Seed eggNOG ortholog2880.D7FRF8
KEGG rclassRC01018,RC01906,RC01907,RC02441,RC02467,RC02468,RC02674,RC02675,RC02686
KEGG koko:K01061,ko:K14515,ko:K18272
KEGG ReactionR03893,R05510,R05511,R06835,R06838,R08120,R08121,R09136,R09220,R09222
KEGG Pathwayko00361,ko00364,ko00623,ko01100,ko01110,ko01120,ko01130,ko04016,ko04075,map00361,map00364,map00623,map01100,map01110,map01120,map01130,map04016,map04075
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Dienelactone hydrolase family
EggNOG OGsCOG0412@1,KOG3043@2759
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-08_000790.1
EC3.1.1.45
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121,ko04147
Exons7
Model size1328
Cds size732
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930455.607517-UTR-H-paniculata_contig4929:8770..88621622930455.607517-UTR-H-paniculata_contig4929:8770..8862Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4929 8771..8862 +
1691481299.5381653-UTR-H-paniculata_contig4929:8770..88621691481299.5381653-UTR-H-paniculata_contig4929:8770..8862Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4929 8771..8862 +
1622930455.7354157-UTR-H-paniculata_contig4929:13942..144461622930455.7354157-UTR-H-paniculata_contig4929:13942..14446Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4929 13943..14446 +
1691481299.623957-UTR-H-paniculata_contig4929:13942..144461691481299.623957-UTR-H-paniculata_contig4929:13942..14446Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4929 13943..14446 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930455.6268306-CDS-H-paniculata_contig4929:8862..88901622930455.6268306-CDS-H-paniculata_contig4929:8862..8890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 8863..8890 +
1691481299.550904-CDS-H-paniculata_contig4929:8862..88901691481299.550904-CDS-H-paniculata_contig4929:8862..8890Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 8863..8890 +
1622930455.6479633-CDS-H-paniculata_contig4929:10439..105141622930455.6479633-CDS-H-paniculata_contig4929:10439..10514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 10440..10514 +
1691481299.561796-CDS-H-paniculata_contig4929:10439..105141691481299.561796-CDS-H-paniculata_contig4929:10439..10514Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 10440..10514 +
1622930455.6605241-CDS-H-paniculata_contig4929:10822..108871622930455.6605241-CDS-H-paniculata_contig4929:10822..10887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 10823..10887 +
1691481299.5722675-CDS-H-paniculata_contig4929:10822..108871691481299.5722675-CDS-H-paniculata_contig4929:10822..10887Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 10823..10887 +
1622930455.6759531-CDS-H-paniculata_contig4929:11405..115031622930455.6759531-CDS-H-paniculata_contig4929:11405..11503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 11406..11503 +
1691481299.5843577-CDS-H-paniculata_contig4929:11405..115031691481299.5843577-CDS-H-paniculata_contig4929:11405..11503Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 11406..11503 +
1622930455.6890059-CDS-H-paniculata_contig4929:12184..124221622930455.6890059-CDS-H-paniculata_contig4929:12184..12422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 12185..12422 +
1691481299.5977318-CDS-H-paniculata_contig4929:12184..124221691481299.5977318-CDS-H-paniculata_contig4929:12184..12422Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 12185..12422 +
1622930455.7031205-CDS-H-paniculata_contig4929:12999..131421622930455.7031205-CDS-H-paniculata_contig4929:12999..13142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 13000..13142 +
1691481299.606772-CDS-H-paniculata_contig4929:12999..131421691481299.606772-CDS-H-paniculata_contig4929:12999..13142Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 13000..13142 +
1622930455.7193902-CDS-H-paniculata_contig4929:13857..139421622930455.7193902-CDS-H-paniculata_contig4929:13857..13942Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 13858..13942 +
1691481299.6152303-CDS-H-paniculata_contig4929:13857..139421691481299.6152303-CDS-H-paniculata_contig4929:13857..13942Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4929 13858..13942 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4929.12106.1prot_H-paniculata_contig4929.12106.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4929 8863..13942 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4929.12106.1

>prot_H-paniculata_contig4929.12106.1 ID=prot_H-paniculata_contig4929.12106.1|Name=mRNA_H-paniculata_contig4929.12106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
MASSACCAAGPPVTIDYTPKGTMSKVGDIDTYFIGSGPKSLIVAYDIFGY
SSQTKQVCDKLATAGYNVAMPDFFKGKPWMLDNFPPKDRDELVAWINSSG
DWTTVVLPMTTAVMSHMKSEKGAETFGFMGFCWGGKMCMQAAAMGSESGI
VATACVHPAMLTPEMASEVKVPMLIMPSKDEPDFAPLKEELDKKDFGEKC
RLHRFDDMHHGFCSARGDWAIPEQAVRASEAIGLFQKFFDDSL*
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mRNA from alignment at H-paniculata_contig4929:8771..14446+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4929.12106.1 ID=mRNA_H-paniculata_contig4929.12106.1|Name=mRNA_H-paniculata_contig4929.12106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5676bp|location=Sequence derived from alignment at H-paniculata_contig4929:8771..14446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCAACGACACATCAGCGGCGAGCTTGACGTCTTCTTCAAGGCCACTCAC
ACACAATACAGTTACTTGACCTTTAATCAAAAGGTTGTTACCATGGCTTC
TTCTGCGTGCTGTGCAGCTGGTGAGTACAGTCAGATGGGTGCACTACGTT
CGAAAAGATTTCTGCGAGGGCATGAGGTATTGAGTCCGCATAACTGTGTG
TGTGCTGTAAAGTTTAGTGCTAAAATTTAGCGTATGCGGTATACAGCAGT
ATTTCGTCGCTGGACTAGTCATGGTGGCCATGAGAAGAGCCGATTCCTCG
CCCAGAAGGTGTAATACAAGTAATTGTCTGCGCCTTCTCCTTGAGGGTGC
TCAGGAGATATACTATACCACAATTGTGAATGATCCCAACCCACTCGTTA
CACATGTTGTTTCTGATGGTGGCATACAGCGATCTATCTGTGCAGGTCAT
ATTTCCATGCATATTGGCTTTTGAGGTTTTGTTCTCTTTCGCGATTGCGC
ACCCGGTCGAAACTGTCATCCCCAAAGCAAGCCCAACCCAACCCCATGCA
TCGATCTGGGTCCTGTAGCATCTAAAACTGATCAAAAGATGCGCCTCTCT
GCGCCTCTGCCATGAAGTAAACGGTAGAAAGTTCTAGGTTCTCTAAAGAG
ATCAATTCAGAATTATTTAGATGTTCCGCATAACGTCCAGCAGGATACAC
CAGTAGAGACTGGGTCGCGGGGTCGTGGTTTCTTCACACGTAGGGTCTTT
ACACGAAAGCTCACCGTGTGCTTGTGAATTTGATGGCCATAGCTCCCTAT
TTTGGACTAGATTTTCGCGCTAAGGTCAAATTGACAAATAATTACATCAG
GACGCCAAGGACACCGGATACAGAGAGAGGTAGTCTATGACAATAGCCCA
TCAGTACAAAATATGCGAATATGGCGGCACTCAACGGGGGCGCTGACGCG
GCAATGCTCAATGAGCGACAGTAAAGGGCAACGATCAACGATCAAATCGA
TGTAGAAGGGGGGGGGGGCGAGACTGCACTGTCTGTGTACACTACCAATG
TTGTTTCACAGTCTAACAACTATTGTAGAACATGTGATATCCGAAATTAG
CAGCAAAGATCCTGCCCTGACGGGTTTCTGGACAACTACAGTAATTACAA
GTAACAACCAACTGCTAGGATGATACTCTGATATCAATAATACAGTCGAC
CTACAAAACTCCAGGAGTGTTCTCGGTAGTCATGTCGAGGTAAAAATATT
GCGGTATTTCGCAATGTTCGGTATTCGGTACTGATACCGTGAGAAATTTG
GTTTCCCGTTTACAGTCACCGTGCATGGCACAGGCAAACGTGATGCCACG
TTTAATCGTATACATGATTGACATGTTGAGGCCTTTCAGTGCCGAAGATC
AACGGGCCGTCATTTGTGTACTCTCGGAAGTATGTAAATACTGTTCAAAT
GGAATGCGAGTGTAAATACGAGTCAGCCTTGACACTTCGTTTATTAAAGT
GGGTACTAAACCTGGTCCACGATTGTTCCTGCAGTTTAGGGATCCGACTT
TGTGGTCGTTCAAAAGGATAAATTACTCTGCTTTCCGTGCTGACTCTGCC
AACTTTGCCCCTCGTACTTGATGTGGTGTGTATCGACGTATCGATGTACC
TATTTATCCTGTGACGCAGGTCCGCCTGTCACAATCGATTACACGCCCAA
GGGAACGATGTCCAAGGTTGGCGACATCGACACTTACTTCATCGGTCAGT
CAAAAATGAAACGCTGACTTGTTGAAATGCGATGGTCAAACCTTCAGCAC
TTGACATATTTTCATGTCGTTCTCGTCATTTAATCAGTTGCGCAGTATCG
TGAGATTGATCAGTGTTGATCAGTGTTCCAACGTCCGGTCGTGGCGTGCT
CGTTGTCGTGACGCTCCATATGATGGCAACGTTCGCTTATGGTCGTCCCT
TCAGTTGAATTTCTGTGCCATTGGAGTAAGCTTAGCGTATCGCGAAAGCG
TTCGTGACGTTTATTTCCCTTTCGTTTCATGCTTTGTCATGTGTCGCTCT
AGGTTCCGGACCGAAGAGCCTGATCGTGGCTTACGACATATTTGGGTATA
GTTCACAAACGAAGCAGGTACGAAGTCGTACATGAGTATGAGGAAATCGC
AGTCTCGTTCAAACAGATACCCCCGCTGTGCATTGGGCCAACATACTCGC
CATGTAGAATGGCAGGCGTGTGCTGATTGGGTAGCAAGGATACCGGGAAT
ACCAGCATACCCCCAATTGTACCCCCGTTGTGAACTGATGTGGTTAAAGA
CGTTTCTGAGATCTGCGTGGTGAGGGACGATATAGTGCTGCATACTAGAT
GGCTGTCATAGTTTGCCATCACGAGTTCATGGACGTGCGAGGGTGCGCAC
TGTTTGAAGTGTGGTCATTGTTGAATTTGCGCCCACCTGCACCAGTTAAA
AAACGTCCTAACGTACGTCCACCAAAGGCTCGAGGGTTGTAATGTATACT
GTTGACTTCTCTGGTGTATTGCACCACGTGTGTGCGACGCACGATTCCCC
GAAACCCTAGCAAACGTTTGGTAAAACTGGCCATCGATCAACATTCTTAA
GTCGGTTTCGGCCCCTCGTCTGCCCGCCGACCAAGGTGTGCGACAAGTTG
GCGACCGCCGGGTACAACGTTGCCATGCCGGACTTCTTCAAGGGAAAGCC
ATGGATGCTTGACAACTTCCCGCCCAAAGATAGGTCTGTCGTTTTGAACG
TACCCGGGCGCAACGCTCTTCACAACTGCCCTTATTCTACTCGAAGAGCA
AACGTACGTGTTTGGTAGAGGTGCTCTATGGTAGCGTCAATATTTAATGT
TGGGCAACCATGACATCACAAGGTTTTTTATCCTTGAAGATTACCTTTCC
ATGATTTTGGTAGGATTGTGTATCAGCACCGTATATTTTTCAACATGTCA
TCGATATCGATATATCATGTATATCGCTGTGTGGGACCTGATATATCGGC
GTTTGCCCTGATCGCAAATATAGTGGTTCATATCTGTCTTTATCCTAACG
ACGATTCTGAGCGATTAGACCAAAGTCTCACAGACACGAACGTGTTCATG
GGCTGTCCGTTTGACACATTACGCCACCTCGGCTCTGCGCGCAACAGCCG
ATATTTTCGCAGTACTTGAGCTTCTTCGATATATCGCGTTAAAGTCGACT
ATACCTACCTATCCATGACCTGAGATGTCGGAGGACCTTTGCTGGCCTCT
TAAAGGTTGAACAGCGACGTATTGTGTCTCGGTCGATGTACCCGCTAAAC
ATTTGCTCCCTCTCAAGTCGAGGGTGTTCCAGGCATTGTAGATTTTTCGC
ATGAAGCAGCCGACCGTAGCAACCAACGTAGCCACTCGCTCTCCCTCATG
TCCCTATACAAAAGGGACGAGCTCGTGGCATGGATCAACTCCTCCGGTGA
CTGGACAACTGTCGTTCTTCCCATGACGACGGCAGTGATGTCTCACATGA
AAAGCGAAAAGGGAGCAGAGACCTTTGGCTTTATGGGTTTCTGCTGGGGC
GGTAAGATGTGCATGCAGGCGGCTGCAATGGGTTCTGAGAGCGGCATCGT
TGCCACAGCTTGCGTGCACCCGGCGATGCTCACCCCGGAGATGGCCAGCG
AGGTGCGTGTTCTCTTGTTGACGATAATGACCTTAACATGTTGAGTCATT
TCTCTCATGTGGCATCGAATTCACGAGGCGCCCGCATGTTTCTGTTATCC
TCCTGGAATGGTGACTTCTGGCACTAAAGGCTACGTACGTCGGAGTTTTC
GATGTAAGGCAACAGTTGTTCGTGTTGGATAATTTGGGCTGGAATGCGTC
TCGACGTCGCGTCAGACTACAGGACGGACGACCCAGTTCCTACATGGGCA
CGCAGTGGTCAACTTTGCAAGTCGTATATCGTCAAGACAATCCGCGAAAC
GAACAAAATTAGCAGGCGGGGGATAGAACGTCGACCTACTCTTCTATGGA
AGAATATTGTATTGTTTCTCCCATCGTCGCGCGCAAATTCCCTGTCGGAC
GGGACGAAGAACAACGATCTTCTGCCAATAGGTGAGAAATAATGTGCTTC
CATCCACTGTTCTAGGATCGCTGTGTAATGGGCATACCGGTGCCCGGTCG
GCACATAGATTGGGTGCTTCTAGTACCCAGCCGAAATTTGCTTTAGTGTA
AGCACAACTACCCTCCTTCGCACGACCAGGTGAAGGTGCCGATGCTCATC
ATGCCATCGAAGGACGAACCCGATTTCGCTCCCTTGAAAGAGGAGTTGGA
CAAGAAAGACTTCGGAGAGAAATGCCGACTCCACCGATTCGACGACATGC
ACCACGGTTTCTGCTCCGCCAGGTGAAGAAAAAAACCGGCGAGAGCTGCA
CCATCGTCGCCATGCCGTTTGACTACTAGGCCACTAGTCAACATTCAACT
CGATCCTCGATCATCGAGCAGCAAAATAGTACAGCCACTTTAGCCGTAGC
TACGAGCGAATGGACGAACGGTGAGAGGATAAACCAGTAGATTAATTCAC
AAGATACGCCATGTCTTGACTTCAGGCTCCCTTCTCGAGGCGAGTTCGAC
GGTAGATTCATCTTGTTCCATTTTTCACTTGTCTACTTGACCTATTTTCA
GAGGATCCTGGTAACATACCCCACCCCTCCAAGGGTTGGATATTGGGCAG
TGTAAATTTGCAGTAGTGAGCAGATACGGACTCCATCTGTGATTGCTTCA
AACAGCCGTTTTTTGCACTTGATCTAACAAACAGGCTGCAGCAATGATAT
CGTATTCCGTTTGGCTTGTAGTACAGTCACTAACGGTCGCTGTTCGTGTA
TGGTGGATATGCGCCAAGGAGAAAGCCTCCTGGGGTATTTCTGTCAAAAT
CGGAATTTCATGGTCATGTAAAGTACAGCAATATTCAAAGTCCAGTTGTG
GCAGCTGATAATTGATGAACTACTTCTAATTGGCCTTCCCATACACCACA
AATCCTTTCGTTCACCACATTCTGTTACACCACTCCATGTGTTACCCCCC
CCCCCTGTTTCTGAATATCATATTCGCTTTGCATTAGGGGGGACTGGGCG
ATTCCGGAGCAAGCAGTCAGGGCGAGCGAGGCGATTGGGTTGTTCCAGAA
GTTTTTTGACGACAGCTTGTGATCAACGAAAATTTATAGATACCATGTCA
CCGAAGACCACCGTTTAGAGCTGTGGGAAAACAGCTTCGGGGGGGGGGGC
TTGCTATGCCTCCCTCCATTTACCGACTGTCCTTCCTTTGTTGCCTATCG
TTTGCTTCAGTTTCAGAGCTTGGTGACCGTGCGCGCCATGGTTGAAAGGA
TGGATTTCAACACCTGTTCTATTGGTAGACCGTAACGTCAATACCTAGCG
CCCACAATCGTTCTTGTCGAATGTTTCACTTCTCCCGATGAACATATATT
TACTGGTACTAAAGAAAACGAGTCAAGGGGAATGATATTTGGGGTACTGT
GTGAAGAAACAGGAGCAGTCAAGGAGCATTTGCTTCTGGTAAAGGATTTC
GTCTGTTTTCTTGTCTTGCGACTCGGGTGAGGTACACGCCACTGCGTGCC
AACTTTGCCTGTAGCAGTGTCTTCCAAAGTGAGGTTCAACCCTAAAACAG
TGCTTTCCCTACTAACTAAAAATGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig4929:8771..14446+

>mRNA_H-paniculata_contig4929.12106.1 ID=mRNA_H-paniculata_contig4929.12106.1|Name=mRNA_H-paniculata_contig4929.12106.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig4929:8771..14446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTTCTTCTGCGTGCTGTGCAGCTGATGGCTTCTTCTGCGTGCTGTG
CAGCTGGTCCGCCTGTCACAATCGATTACACGCCCAAGGGAACGATGTCC
AAGGTTGGCGACATCGACACTTACTTCATCGGTCCGCCTGTCACAATCGA
TTACACGCCCAAGGGAACGATGTCCAAGGTTGGCGACATCGACACTTACT
TCATCGGTTCCGGACCGAAGAGCCTGATCGTGGCTTACGACATATTTGGG
TATAGTTCACAAACGAAGCAGGTTCCGGACCGAAGAGCCTGATCGTGGCT
TACGACATATTTGGGTATAGTTCACAAACGAAGCAGGTGTGCGACAAGTT
GGCGACCGCCGGGTACAACGTTGCCATGCCGGACTTCTTCAAGGGAAAGC
CATGGATGCTTGACAACTTCCCGCCCAAAGATAGGTGTGCGACAAGTTGG
CGACCGCCGGGTACAACGTTGCCATGCCGGACTTCTTCAAGGGAAAGCCA
TGGATGCTTGACAACTTCCCGCCCAAAGATAGGGACGAGCTCGTGGCATG
GATCAACTCCTCCGGTGACTGGACAACTGTCGTTCTTCCCATGACGACGG
CAGTGATGTCTCACATGAAAAGCGAAAAGGGAGCAGAGACCTTTGGCTTT
ATGGGTTTCTGCTGGGGCGGTAAGATGTGCATGCAGGCGGCTGCAATGGG
TTCTGAGAGCGGCATCGTTGCCACAGCTTGCGTGCACCCGGCGATGCTCA
CCCCGGAGATGGCCAGCGAGGGACGAGCTCGTGGCATGGATCAACTCCTC
CGGTGACTGGACAACTGTCGTTCTTCCCATGACGACGGCAGTGATGTCTC
ACATGAAAAGCGAAAAGGGAGCAGAGACCTTTGGCTTTATGGGTTTCTGC
TGGGGCGGTAAGATGTGCATGCAGGCGGCTGCAATGGGTTCTGAGAGCGG
CATCGTTGCCACAGCTTGCGTGCACCCGGCGATGCTCACCCCGGAGATGG
CCAGCGAGGTGAAGGTGCCGATGCTCATCATGCCATCGAAGGACGAACCC
GATTTCGCTCCCTTGAAAGAGGAGTTGGACAAGAAAGACTTCGGAGAGAA
ATGCCGACTCCACCGATTCGACGACATGCACCACGGTTTCTGCTCCGCCA
GGTGAAGGTGCCGATGCTCATCATGCCATCGAAGGACGAACCCGATTTCG
CTCCCTTGAAAGAGGAGTTGGACAAGAAAGACTTCGGAGAGAAATGCCGA
CTCCACCGATTCGACGACATGCACCACGGTTTCTGCTCCGCCAGGGGGGA
CTGGGCGATTCCGGAGCAAGCAGTCAGGGCGAGCGAGGCGATTGGGTTGT
TCCAGAAGTTTTTTGACGACAGCTTGTGAGGGGGACTGGGCGATTCCGGA
GCAAGCAGTCAGGGCGAGCGAGGCGATTGGGTTGTTCCAGAAGTTTTTTG
ACGACAGCTTGTGA
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