prot_H-paniculata_contig49200.12095.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig49200.12095.1
Unique Nameprot_H-paniculata_contig49200.12095.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length163
Homology
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.400e-33
Identity = 67/161 (41.61%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +AV Q      N A VHM + K +LRYL+G P++ + Y +   F L+ F D+S+G  +P+  RST+G ++FL GG++ + +  Q + AQ+T EAEL A+S  A++ VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+A  F  LR+
Sbjct:   96 DLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 254          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 2.030e-31
Identity = 67/161 (41.61%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +AV Q      N A VHM + K +LRYL+G P++ + Y +   F L+ F D+S+G  +P+  RST+G ++FL GG++ + +  Q + AQ+T EAEL A+S  A++ VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+A  F  LR+
Sbjct:  533 DLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GKFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 691          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.030e-31
Identity = 67/161 (41.61%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +AV Q      N A VHM + K +LRYL+G P++ + Y +   F L+ F D+S+G  +P+  RST+G ++FL GG++ + +  Q + AQ+T EAEL A+S  A++ VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+A  F  LR+
Sbjct:  692 DMSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRE 850          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KHG5_9PHAE (Uncharacterized protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG5_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.190e-31
Identity = 67/161 (41.61%), Postives = 103/161 (63.98%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +AV Q      N A VHM + K +LRYL+G P++ + Y +   F L+ F D+S+G  +P+  RST+G ++FL GG++ + +  Q + AQ+T EAEL A+S  A++ VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+A  F  LR+
Sbjct: 1312 DLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDNGRSTTGYLFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRN 1470          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KMQ5_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ5_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.330e-30
Identity = 64/160 (40.00%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLR 161
            D+ +A  Q +    N A V M + K +LRYL+G P + + Y R   F L  F D+S+G  +P+  RST+G ++FL+GG++ + +  Q +TAQST EAE+ A+S  A++ VY+S  + EL +K F SV I  D+ GAL +AG   +  R+KH+A  +  +R
Sbjct:   15 DLSYAALQLSKACSNPAQVSMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIR 172          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KY35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY35_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 8.170e-30
Identity = 64/156 (41.03%), Postives = 98/156 (62.82%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCF 157
            D+ +AV Q      N A VHM + K +LRYL+G P + + Y +   F L+ F ++S+G  +P+  RST+G M+FL GG++ + +  Q + AQ+T EAEL A+   A++ VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+A  F
Sbjct:  393 DLSYAVHQLTRACANPAQVHMAAAKHLLRYLRGTPGLPIVYKK-GQFRLSCFTESSFGA-NPDNGRSTTGYMFFLGGGLISYGAKAQTLAAQNTVEAELQALGFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRF 546          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5K8X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X2_9PHAE)

HSP 1 Score: 117 bits (293), Expect = 3.050e-29
Identity = 63/160 (39.38%), Postives = 99/160 (61.88%), Query Frame = 0
Query:    3 IGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            + +AV Q      N A VHM + K +LRYL+G P++ + Y +   F L+ F D+S+G  +P+  RST+G ++ + GG++ + +  Q + AQ+T E EL A+S  A + VY+S  + E+G+K FRSV I  D+ GAL +A    + SR+KH+ F F  LR+
Sbjct:   76 LSYAVHQPTRACANPAQVHMAAAKHLLRYLRGTPDLPIVYKK-GQFRLSCFTDSSFGA-NPDIGRSTTGYLFCVGGGLIGYGAKAQTLAAQNTVEVELQALSFSACEAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIRFFFFFLRE 233          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 3.980e-29
Identity = 64/161 (39.75%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +A  Q +    N A V+M + K +LRYL+G P + + Y R   F L  F D+S+G  +P+  RST+G ++FL+GG++ + +  Q +TAQST EAE+ A+S  A++ VY+S  + EL +K F SV I  D+ GAL +AG   +  R+KH+A  +  +R+
Sbjct:  292 DLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRE 450          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 9.940e-29
Identity = 64/161 (39.75%), Postives = 101/161 (62.73%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +A  Q +    N A V+M + K +LRYL+G P + + Y R   F L  F D+S+G  +P+  RST+G ++FL+GG++ + +  Q +TAQST EAE+ A+S  A++ VY+S  + EL +K F SV I  D+ GAL +AG   +  R+KH+A  +  +R+
Sbjct:  500 DLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKR-GQFRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEIQALSYSAREAVYISNFMTELNFKTFGSVPINSDSTGALTVAGNAMHSQRTKHVALRYFFIRE 658          
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Match: A0A6D2J922_9BRAS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2J922_9BRAS)

HSP 1 Score: 119 bits (299), Expect = 1.040e-28
Identity = 61/161 (37.89%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    2 DIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFELTGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAELIAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRSKHLAFCFAGLRD 162
            D+ +A+   + FM N  +VH  +++ +L+YLKG  + KL +++ S+F + GF D+ Y  GD ++ RS +G ++ + G VV + S+LQ++ A STTEAE IA+S   K+G++L G++ ELG+K   +  I+CD++ A+ LA    +  R+KH+A  +  +RD
Sbjct:  291 DVAYAIGLVSRFMSNPGNVHWTAIRWLLKYLKGMQDKKLVFTKGSDFRVEGFSDSDY-AGDKDRRRSITGYVFRVGGNVVSWKSNLQQVVALSTTEAEYIALSEAVKEGIWLRGLVEELGFKQ-EATDIWCDSQSAICLAKNNVFHERTKHVAVKYHFIRD 449          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig49200.12095.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KC04_9PHAE2.400e-3341.61Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE2.030e-3141.61Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE3.030e-3141.61CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KHG5_9PHAE3.190e-3141.61Uncharacterized protein n=11 Tax=Ectocarpus sp. CC... [more]
A0A6H5KMQ5_9PHAE1.330e-3040.00Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY35_9PHAE8.170e-3041.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8X2_9PHAE3.050e-2939.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQD0_9PHAE3.980e-2939.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE9.940e-2939.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2J922_9BRAS1.040e-2837.89Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 2..161
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig49200contigH-paniculata_contig49200:400..888 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig49200.12095.1mRNA_H-paniculata_contig49200.12095.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig49200 316..1368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig49200.12095.1 ID=prot_H-paniculata_contig49200.12095.1|Name=mRNA_H-paniculata_contig49200.12095.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=163bp
MDIGFAVSQAACFMPNLASVHMRSVKRILRYLKGAPNVKLDYSRDSNFEL
TGFCDASYGTGDPEKARSTSGSMYFLSGGVVHFSSSLQKITAQSTTEAEL
IAMSTCAKQGVYLSGILGELGWKNFRSVRIFCDNKGALLLAGQGNYGSRS
KHLAFCFAGLRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like