mRNA_H-paniculata_contig4919.12091.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: D8LLH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLH0_ECTSI) HSP 1 Score: 356 bits (914), Expect = 2.340e-119 Identity = 171/227 (75.33%), Postives = 199/227 (87.67%), Query Frame = 2
Query: 5 RRDVARTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALEQWQE 685
RR+V R MFSGIVEEMGSV+SL+KND ++LWDG G GVELTVKA VL+GAT GCSI VNGVCLTV SF+D+EFKVGLAPETLR+SNLE L GD VNLERAL V+GRNSGHFVQGHVD+VGTI+SME+DE+S+VVK++ P++L+RYI PKGFIA+DGTSLTVCEV+N+EC FT MLVAYTQ H+V+P +GDKVNLEVDVLGKY+ERS S LDRLGALE W+E
Sbjct: 59 RREVVRAMFSGIVEEMGSVASLVKNDKVKLWDGSEGAGVELTVKANTVLEGATEGCSIAVNGVCLTVTSFNDDEFKVGLAPETLRRSNLEDLRAGDGVNLERALPVDGRNSGHFVQGHVDNVGTILSMEADEDSLVVKVEVPQDLIRYIAPKGFIAVDGTSLTVCEVNNQECWFTFMLVAYTQQHVVIPKKSKGDKVNLEVDVLGKYIERSLSSVLDRLGALEDWRE 285
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A835Z1K1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1K1_9STRA) HSP 1 Score: 328 bits (840), Expect = 2.260e-107 Identity = 173/284 (60.92%), Postives = 203/284 (71.48%), Query Frame = 2
Query: 5 RRDVARTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE-----------QWQEEMDSQLKVTKASIPRNMGDKLERLDHLIKNRDLVLDLVENRLARLE 823
RR V R MFSGIVEE G+V SL +N AI+LWDG VGEGVELT+ AKV L+GA+ GCSI VNGVCLTV FD+E+F+VGLAPETLR+SNL L GD VNLERALA GRNSGHFVQGHVDDVGTI + + +S+ V++ AP ELMRYIVPKGFIA+DGTSLTVCEV+ E FT MLVAYTQ HIVLP GDKVN+EVDVLGKYVERS + LDRL ALE + + S+ +G ++H + +RDLV+D VE RL +E
Sbjct: 58 RRAVIRAMFSGIVEEKGTVKSLERNSAIKLWDGSVGEGVELTIAAKVALEGASLGCSIAVNGVCLTVTDFDEEQFRVGLAPETLRRSNLRDLAAGDAVNLERALASGGRNSGHFVQGHVDDVGTIAAFTPEGDSLWVRVSAPRELMRYIVPKGFIAIDGTSLTVCEVNAAEAWFTFMLVAYTQAHIVLPGKAVGDKVNIEVDVLGKYVERSLASVLDRLDALETAAAAAAPPKAEGARAXXXXXPAAEGSVEYRLG----AVEHKVTSRDLVIDSVEARLRTIE 337
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A6V1VK25_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1VK25_HETAK) HSP 1 Score: 274 bits (700), Expect = 2.860e-87 Identity = 141/221 (63.80%), Postives = 166/221 (75.11%), Query Frame = 2
Query: 14 VARTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAK-VVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE 673
V R MFSGIVEEMG V SL + +++WDG G G EL +++ VLDGA +G SI VNGVCLTV+ FDD+ F+VGLAPETLR+SNL L G RVNLERALA + RNSGHFVQGHVD+ GTI+ + + +S+ VK+ ELMRYIVPKGFIA+DGTSLTVCE + E F MLVAYTQ HI++PS GDKVN+EVDVLGK VERS LDRL ALE
Sbjct: 41 VPRMMFSGIVEEMGIVRSLEEKTDMKMWDGSTGSGTELCIESDGTVLDGAYDGASIAVNGVCLTVIEFDDKSFRVGLAPETLRRSNLPLLEAGQRVNLERALAADARNSGHFVQGHVDETGTILELRPEGDSLWVKVGVSRELMRYIVPKGFIAIDGTSLTVCETNVAEGWFNFMLVAYTQKHIIIPSKSLGDKVNVEVDVLGKLVERSLGNVLDRLDALE 261
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A8J6CDG9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDG9_DIALT) HSP 1 Score: 270 bits (689), Expect = 1.810e-85 Identity = 138/222 (62.16%), Postives = 163/222 (73.42%), Query Frame = 2
Query: 20 RTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEE--FKVGLAPETLRQSNLE--GLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE 673
R MFSGIVEEMG V SL + ++LWDG +G G EL V+ VLDGAT GCSI VNGVCLTVV FD F+VGLAPETLR++NL L GD VNLERAL +GRNSGHFVQGHVD VG +VS+ D +S+ V +KAP LM+YIVPKGFIA+DGTSLTVC+VD TF+ ML+ YTQ H+V+P G VNLE DV+GKYVERS + +R+ ALE
Sbjct: 48 RAMFSGIVEEMGRVESLAERTDMKLWDGTIGSGWELAVRGSTVLDGATQGCSIAVNGVCLTVVDFDAGSGVFRVGLAPETLRRTNLNPAALKAGDAVNLERALPADGRNSGHFVQGHVDAVGELVSLTPDGDSLWVVVKAPRSLMKYIVPKGFIAVDGTSLTVCDVDYAASTFSFMLIGYTQQHVVIPQKSAGLTVNLEADVIGKYVERSLAGLSERVAALE 269
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A7S3AZ04_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AZ04_9EUKA) HSP 1 Score: 268 bits (684), Expect = 2.750e-85 Identity = 136/218 (62.39%), Postives = 161/218 (73.85%), Query Frame = 2
Query: 20 RTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE 673
R MFSGIVEEMG++ L K D + LWDG VGEG E+ V+A VL A+ GCSI VNGVCLTV FD+ F VGLAPET+R+SNL L GD VNLERAL +GRNSGHFVQGHVDDVG + + D +S+ VK++ P L+ YIVPKGFIA+DGTSLTVCEV+ E F MLVAYTQ I++P + GD VNLEVDV+ KYVE+S + L RL ALE
Sbjct: 16 RAMFSGIVEEMGTIRRLEKVDGLTLWDGSVGEGWEMEVEASEVLGQASLGCSIAVNGVCLTVTEFDEGSFSVGLAPETIRRSNLVKLKTGDPVNLERALPADGRNSGHFVQGHVDDVGILEELLPDGDSLFVKVRPPARLLPYIVPKGFIAVDGTSLTVCEVNYTEGWFNFMLVAYTQQKIIIPKKKVGDPVNLEVDVISKYVEKSMASVLARLDALE 233
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A0M0JSD6_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JSD6_9EUKA) HSP 1 Score: 266 bits (680), Expect = 6.050e-85 Identity = 134/216 (62.04%), Postives = 159/216 (73.61%), Query Frame = 2
Query: 26 MFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE 673
MFSGIVEEMG VS L K ++ WDG VGEG EL V+A V L+GA+ GCSI VNGVCLTV FD +FKVGLAPET+R++NLE LV GD VN+ERAL +GRNSGHFVQGHVDD+G I + D +S+ V+++ P LM YIVPKGFIA+DGTSLTVC V+ E F ML+A+TQ +V+P GD VNLEVDVL KYVE+ RL ALE
Sbjct: 1 MFSGIVEEMGKVSKLDKVPRLKQWDGTVGEGWELEVEATVALEGASLGCSIAVNGVCLTVTEFDKHKFKVGLAPETIRRTNLERLVPGDPVNVERALPADGRNSGHFVQGHVDDIGIIEELRPDGDSLWVRVRPPARLMPYIVPKGFIAIDGTSLTVCNVNAAEGWFDFMLIAFTQQKVVIPKKAVGDAVNLEVDVLAKYVEQGLKAVTARLDALE 216
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A7S3SZI5_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3SZI5_9SPIT) HSP 1 Score: 266 bits (679), Expect = 1.120e-84 Identity = 134/218 (61.47%), Postives = 156/218 (71.56%), Query Frame = 2
Query: 20 RTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALE 673
R +FSGIVEE+G V L K + LWDG VGEGVE+ V A VL+GA GCSI VNGVCLTV FDD+ GLAPETLR++NL G VNLERAL +GRNSGHFVQGHVDDVG I SM D ++ V+I+ P LM+YIVPKGFI +DGTSLTVCE D + F MLVAYTQ HI LP + G++VNLEVDV+ KYVERS +DR+ LE
Sbjct: 2 RCVFSGIVEEIGEVVRLEKRGDLTLWDGSVGEGVEMEVAASTVLEGAYEGCSIAVNGVCLTVTKFDDKTACFGLAPETLRRTNLHAAGPGTLVNLERALPADGRNSGHFVQGHVDDVGVIESMTPDGEALTVRIRPPAHLMKYIVPKGFICVDGTSLTVCEADPGKGWFDFMLVAYTQQHIALPKKKVGEQVNLEVDVMAKYVERSVGALVDRVAELE 219
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: B7G545_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G545_PHATC) HSP 1 Score: 265 bits (678), Expect = 1.700e-84 Identity = 133/228 (58.33%), Postives = 166/228 (72.81%), Query Frame = 2
Query: 26 MFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEE--FKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALEQWQEEMDSQL 703
MF+GIVEEMG V SL + D + LWDG G G ELTVKA ++++GA GCSICV+GVCLT D +E F+VGLAPET+R++ L L GD VNLERA + GRNSGHFVQGHVDD G I+ +DE+S+ KIK +++ YIVPKGFIA+DGTSLTVCEVD +E FT MLV YTQ I++P+ + GD+VNLEVDVLGKY E + + + RL ALE E ++ L
Sbjct: 1 MFTGIVEEMGEVVSLTQRDDMPLWDGTKGSGTELTVKASIMMEGAYLGCSICVSGVCLTATELDYDESIFRVGLAPETIRRTYLGDLKTGDAVNLERASEIGGRNSGHFVQGHVDDTGEIIDRWTDEDSLFFKIKVTPDVLAYIVPKGFIAIDGTSLTVCEVDYQEKWFTFMLVEYTQKKIIVPAKKVGDRVNLEVDVLGKYSENALAALIPRLEALEAKVESLEKAL 228
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A7S4ETQ6_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ETQ6_CHRCT) HSP 1 Score: 266 bits (680), Expect = 4.260e-84 Identity = 134/219 (61.19%), Postives = 159/219 (72.60%), Query Frame = 2
Query: 20 RTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDDEEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECTFTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALEQ 676
+ +FSGIVEE+G V L ++LWDG VGEG EL V A+ VLDGA GCSI VNGVCLTV FD + F GL+PETLR++NL+ L G VNLERALA +GRNSGHFVQGHVDDVG I M D ++ +++KAP LM YIVPKGFIA+DGTSLTVC + + F MLVAYTQ I+LPS + GD VNLEVDV KYVERS L+R+ ALE+
Sbjct: 45 QAVFSGIVEEIGEVKRLELKKGLKLWDGSVGEGWELQVGAQTVLDGAYLGCSIAVNGVCLTVTEFDGDSFTAGLSPETLRRTNLQELPSGAPVNLERALAADGRNSGHFVQGHVDDVGVIEEMRPDGEALWIRVKAPPRLMPYIVPKGFIAIDGTSLTVCNTNVADSWFDFMLVAYTQSKIILPSKQVGDAVNLEVDVTAKYVERSMGAMLERIEALER 263
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Match: A0A7S2UER5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UER5_9STRA) HSP 1 Score: 264 bits (674), Expect = 2.810e-83 Identity = 137/233 (58.80%), Postives = 167/233 (71.67%), Query Frame = 2
Query: 20 RTMFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSICVNGVCLTVVSFDD--EEFKVGLAPETLRQSNLEGLVEGDRVNLERALAVNGRNSGHFVQGHVDDVGTIVSMESDENSIVVKIKAPEELMRYIVPKGFIALDGTSLTVCEVDNRECT--FTVMLVAYTQDHIVLPSNREGDKVNLEVDVLGKYVERSFSVFLDRLGALEQWQEEMDSQLK 706
R MF+GI+EEMG+V +L + + + LWDG G G ELTVK VV+DGA GCSI VNGVCLT DD EFKVGLAPETLR++ L L GD VNLERA + GRNSGHFVQGHVD VGTIV DENS+ K++ EL+RYIVPKGFIA+DGTSLTVCEVD+ FT MLV YTQ I++PS + G +N+EVDVLGKY E + + + R+ LE +E+++QLK
Sbjct: 41 RNMFTGIIEEMGTVVALEEKNDLPLWDGSTGSGTELTVKGNVVMDGAYLGCSISVNGVCLTATELDDGNHEFKVGLAPETLRRTYLGQLGAGDAVNLERASEIGGRNSGHFVQGHVDGVGTIVDRWIDENSLFFKVQVEPELIRYIVPKGFIAIDGTSLTVCEVDSSSDKPWFTFMLVEYTQKKIIIPSKQVGGLLNIEVDVLGKYSENALAAIVPRIEELEAKVKELENQLK 273 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4919.12091.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4919.12091.1 >prot_H-paniculata_contig4919.12091.1 ID=prot_H-paniculata_contig4919.12091.1|Name=mRNA_H-paniculata_contig4919.12091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=273bp MFSGIVEEMGSVSSLIKNDAIELWDGKVGEGVELTVKAKVVLDGATNGCSback to top mRNA from alignment at H-paniculata_contig4919:6354..14396- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4919.12091.1 ID=mRNA_H-paniculata_contig4919.12091.1|Name=mRNA_H-paniculata_contig4919.12091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8043bp|location=Sequence derived from alignment at H-paniculata_contig4919:6354..14396- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4919:6354..14396- >mRNA_H-paniculata_contig4919.12091.1 ID=mRNA_H-paniculata_contig4919.12091.1|Name=mRNA_H-paniculata_contig4919.12091.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1638bp|location=Sequence derived from alignment at H-paniculata_contig4919:6354..14396- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |